| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476699
Identifier: 13476699
GI number: 13476699
Start: 6660785
End: 6661609
Strand: Direct
Name: 13476699
Synonym: mlr8090
Alternate gene names: NA
Gene position: 6660785-6661609 (Clockwise)
Preceding gene: 13476698
Following gene: 13476700
Centisome position: 94.67
GC content: 63.15
Gene sequence:
>825_bases ATGAGCGTCGTCTCGGCTATCGTTCTAGCGGCGGCCGCTCTTTGTGCCACCATGGCGGTGGCGTGGCTGGTCGCGATACG GACTGGCAGCTCCGGGTGGGTCGATGCGATCTGGTCTTTTGCCGTCGGCATCATCGGTGCCTTCTTGGCGCTCGTCCCAT TTGTTGAAGGCGACAACGATCATAGGCGATGGCTGGTCGCCCTTTTGGCGCTGGTCTGGTCGCTGCGGCTCGGCGTTCAC ATCGCTGGGAGGACGATCGGCGACAGCCGCGACGATCCGCGCTATCGCCAGCTGAAGCAACAATGGGGCGCAAGTTCCTC AAGCCGGCTGTTCTGGTTCCTTCAGGTACAGGCGGCCGCGGCTTTCCTGCTTGCAATGTCGATCATGGCTGCCGCCCACA AGCCGGCTCCGGAGCTGGGGCCCGGCGACTGGATCGGAGTTGCGATCTGGGTGGTGGCGATTGGCGGCGAGGCGCTGGCG GACAGGCAACTGAATGCTTTTCGAGGCGATCCTCGCAACAAGGGCAAGGTCTGCGATGTCGGCCTGTGGCGCCTATCCAG GCATCCCAATTACTTCTTCGAATGGCTGGGCTGGCTGGCATACATGGCCATCGCGATAGGCTCCCCCTGGGCCTATCCAT GGGGCTTCGCCGCACTTGCGGGCCCCATATTGATGTATTGGCTGCTGGTCCATGTCTCCGGCATCCCGCCATTGGAGGCA CACATGCTGCGCTCGCGTGGGGTACAGTTCCGCCGTTATCAGGAGCGCGTAAACGCGTTCTGGCCGGGCGTGCCGATCGC GGCAACAACCCGGGAAGGGACATGA
Upstream 100 bases:
>100_bases AGGCGAATGTATCTGCATTGCCGCGCTCGAAGGGCAGATGAAGCTGAGCGGCTTCTTCGGCAGGCTGATCCAGCCTCTGT TCGGCGGCTGAGCTCCGGTA
Downstream 100 bases:
>100_bases CAGTGAGCCTGATCTCATCCGCAATCCGTGCCATCGAGAGCACGCCGATTCCCGATACCGCGACACGCTTTGGTATCGGC GTCCTGGTAGGAAAAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSVVSAIVLAAAALCATMAVAWLVAIRTGSSGWVDAIWSFAVGIIGAFLALVPFVEGDNDHRRWLVALLALVWSLRLGVH IAGRTIGDSRDDPRYRQLKQQWGASSSSRLFWFLQVQAAAAFLLAMSIMAAAHKPAPELGPGDWIGVAIWVVAIGGEALA DRQLNAFRGDPRNKGKVCDVGLWRLSRHPNYFFEWLGWLAYMAIAIGSPWAYPWGFAALAGPILMYWLLVHVSGIPPLEA HMLRSRGVQFRRYQERVNAFWPGVPIAATTREGT
Sequences:
>Translated_274_residues MSVVSAIVLAAAALCATMAVAWLVAIRTGSSGWVDAIWSFAVGIIGAFLALVPFVEGDNDHRRWLVALLALVWSLRLGVH IAGRTIGDSRDDPRYRQLKQQWGASSSSRLFWFLQVQAAAAFLLAMSIMAAAHKPAPELGPGDWIGVAIWVVAIGGEALA DRQLNAFRGDPRNKGKVCDVGLWRLSRHPNYFFEWLGWLAYMAIAIGSPWAYPWGFAALAGPILMYWLLVHVSGIPPLEA HMLRSRGVQFRRYQERVNAFWPGVPIAATTREGT >Mature_273_residues SVVSAIVLAAAALCATMAVAWLVAIRTGSSGWVDAIWSFAVGIIGAFLALVPFVEGDNDHRRWLVALLALVWSLRLGVHI AGRTIGDSRDDPRYRQLKQQWGASSSSRLFWFLQVQAAAAFLLAMSIMAAAHKPAPELGPGDWIGVAIWVVAIGGEALAD RQLNAFRGDPRNKGKVCDVGLWRLSRHPNYFFEWLGWLAYMAIAIGSPWAYPWGFAALAGPILMYWLLVHVSGIPPLEAH MLRSRGVQFRRYQERVNAFWPGVPIAATTREGT
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=256, Percent_Identity=27.734375, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI28574404, Length=256, Percent_Identity=27.734375, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21355723, Length=256, Percent_Identity=27.734375, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30120; Mature: 29989
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVSAIVLAAAALCATMAVAWLVAIRTGSSGWVDAIWSFAVGIIGAFLALVPFVEGDND CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH HRRWLVALLALVWSLRLGVHIAGRTIGDSRDDPRYRQLKQQWGASSSSRLFWFLQVQAAA HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHH AFLLAMSIMAAAHKPAPELGPGDWIGVAIWVVAIGGEALADRQLNAFRGDPRNKGKVCDV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECH GLWRLSRHPNYFFEWLGWLAYMAIAIGSPWAYPWGFAALAGPILMYWLLVHVSGIPPLEA HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH HMLRSRGVQFRRYQERVNAFWPGVPIAATTREGT HHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCC >Mature Secondary Structure SVVSAIVLAAAALCATMAVAWLVAIRTGSSGWVDAIWSFAVGIIGAFLALVPFVEGDND HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH HRRWLVALLALVWSLRLGVHIAGRTIGDSRDDPRYRQLKQQWGASSSSRLFWFLQVQAAA HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHH AFLLAMSIMAAAHKPAPELGPGDWIGVAIWVVAIGGEALADRQLNAFRGDPRNKGKVCDV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECH GLWRLSRHPNYFFEWLGWLAYMAIAIGSPWAYPWGFAALAGPILMYWLLVHVSGIPPLEA HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH HMLRSRGVQFRRYQERVNAFWPGVPIAATTREGT HHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA