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The map label for this gene is ydaU [H]

Identifier: 13476618

GI number: 13476618

Start: 6587513

End: 6587998

Strand: Direct

Name: ydaU [H]

Synonym: mlr7995

Alternate gene names: 13476618

Gene position: 6587513-6587998 (Clockwise)

Preceding gene: 13476615

Following gene: 13476619

Centisome position: 93.62

GC content: 57.41

Gene sequence:

>486_bases
GTGAGTAACAGGCGCCTCCCATACATGCCGCTCTGGGTCGACGACTACCAGCGCGACACTCGCCACCTCACCACGGAGGA
GCATGGCGCCTATCTGCTCCTGCTCATGGCCGCCTGGGCATCGCCGACCAATTCCTTGCCCGACGACGATGACATGCTGG
CGCGCATCGCCGGAGTGTCGCTCGCCCGCTGGCGGAAGATGAAAGCCATTGTCATGGCCTTCTGGAGCCTTGATGGTCGG
AGCAAAAGATGGGCGCAAAAACGCCTCAAGAAAGAGAGGCGATTGGCGGTCGATAGAAAGGCGAAAGCGAGCAATGCCGC
CGCAAGCCGTTGGAAAGACAAGAAAAAGGATGATGCTCAAGCGATGCTCGGGCAATGCCATCCTTCCATAACCATCAAAG
AAAAACCTATCGGTTTTTCAGAGCGCGCAGGCGCGCCGAAAAAATCCCGCAAACAGAAAATCGAGGAGGCTTTCGCCGAT
GCATGA

Upstream 100 bases:

>100_bases
ACACCACTGACATCGCCAACGCGCTGCAATGTCGCGAGGATGCCGTTTACCGCACCCTGCAGATGGCCAAGGACGGCGCC
CGTGCTGACCGGAGGCGGGC

Downstream 100 bases:

>100_bases
CCTCGTGGCCAAAGATGATTTCGACAAGCTGCCGGAAAAGTACCGCGACCGTGCCAGGGCGATCAGAGCCCGCGTTGCCG
AGATTGACGGGCTGATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSNRRLPYMPLWVDDYQRDTRHLTTEEHGAYLLLLMAAWASPTNSLPDDDDMLARIAGVSLARWRKMKAIVMAFWSLDGR
SKRWAQKRLKKERRLAVDRKAKASNAAASRWKDKKKDDAQAMLGQCHPSITIKEKPIGFSERAGAPKKSRKQKIEEAFAD
A

Sequences:

>Translated_161_residues
MSNRRLPYMPLWVDDYQRDTRHLTTEEHGAYLLLLMAAWASPTNSLPDDDDMLARIAGVSLARWRKMKAIVMAFWSLDGR
SKRWAQKRLKKERRLAVDRKAKASNAAASRWKDKKKDDAQAMLGQCHPSITIKEKPIGFSERAGAPKKSRKQKIEEAFAD
A
>Mature_160_residues
SNRRLPYMPLWVDDYQRDTRHLTTEEHGAYLLLLMAAWASPTNSLPDDDDMLARIAGVSLARWRKMKAIVMAFWSLDGRS
KRWAQKRLKKERRLAVDRKAKASNAAASRWKDKKKDDAQAMLGQCHPSITIKEKPIGFSERAGAPKKSRKQKIEEAFADA

Specific function: Unknown

COG id: COG3756

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=119, Percent_Identity=32.7731092436975, Blast_Score=66, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 18469; Mature: 18337

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRRLPYMPLWVDDYQRDTRHLTTEEHGAYLLLLMAAWASPTNSLPDDDDMLARIAGVS
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LARWRKMKAIVMAFWSLDGRSKRWAQKRLKKERRLAVDRKAKASNAAASRWKDKKKDDAQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AMLGQCHPSITIKEKPIGFSERAGAPKKSRKQKIEEAFADA
HHHHHCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNRRLPYMPLWVDDYQRDTRHLTTEEHGAYLLLLMAAWASPTNSLPDDDDMLARIAGVS
CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LARWRKMKAIVMAFWSLDGRSKRWAQKRLKKERRLAVDRKAKASNAAASRWKDKKKDDAQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AMLGQCHPSITIKEKPIGFSERAGAPKKSRKQKIEEAFADA
HHHHHCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]