| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476582
Identifier: 13476582
GI number: 13476582
Start: 6560005
End: 6561018
Strand: Direct
Name: 13476582
Synonym: mlr7949
Alternate gene names: NA
Gene position: 6560005-6561018 (Clockwise)
Preceding gene: 13476581
Following gene: 13476583
Centisome position: 93.23
GC content: 57.99
Gene sequence:
>1014_bases ATGTCGCTCGCGCGAATTCTGCTTGATTCAGCCGCCACAACCGCACTCGTCGCCACCATGGCCTTGTCAGCGCCGTCCGT ACACGCCGCCGACAAAGTTTCCATCATGGTCGGCGGCTACGAGAAGCAGATTTACCTGCCAGCCAAACTGACCGAAGCAC TCGGTTACTTCAAGGACGAGGGTCTCGACGTCGAGTTGCTGAATGAGCCGGCCGGGGTCGACGCCGAAAACGAGATGCTT GCCGGTGCCGTGCAAGGAGTTGTCGGCTTTTATGATCACTGCATCGATCTGCAGGCCAAGGGCAAATTCGTCGAATCCGT CGTCCAGTTCAGCCAGGCGCCGGGAGAGGTCGAGCTGGTTTCGACCAAACATCCCGAGATCAAATCACCCGCCGACTTCA AGGGCATGAGCCTCGGCGTGACCGGCCTAGGCTCATCGACGAATTTTCTTACGGAATATCTTGCCGTCAAGAACGGTTTG AAGCTCGGCGAATTCACCTCGGTTCCAGTCGGCGCCGGCAACACCTTCATTGCCGCCATGCAGCAGGACAAGATCCAGGC GGGCATGACGACCGAGCCGACGATCACGCGGCTGCTGAAGACTGGTGAGGCCAAAGTCCTTATCGACATGCGCACGATGG AAGGTACCAAGGCCGCTCTCGGCGGCACCTACCCGGCCGCCTCCCTCTATATGCAGACAGATTGGGTCGAAGCGCACAAG GACATCGTGCAGAAGCTGGCCAATGCTTTCGTCAAGACACAGAAGTTCATCAACACGCACAGTGGCGCCGAGATCGCCGA CAAGATGCCGAAGGACTATTATGTCGGCGACAAGGAAGGCTACGTGAAGGCCCTCGATGCCGGCAAGGCGATGTTCACTC CCGACGGGATCATGCCCGAGGGTGGACCTGAGACAGTGCTGACGGTTCTTTCAGCCTTCAAGAAGGAACTGCAGGGCAAG CAGATTGACCTTGCGAAGACCTACACCTCGGAATTCGTCAAGAACGCCAAGTAG
Upstream 100 bases:
>100_bases TGAAAGGTTGGTGCCATAACTCTTGTCCGGCGCCCCCATATTGTCGCTCAAAAGCGATGGGAGAGAGAGGGGCGCGGGAA ACGAACAAAGGGAAGAGGCC
Downstream 100 bases:
>100_bases CAGACCGTGCCGGCGCGATGAACGACATCGCGCCGGTACCCGTCAGTTTTTTCACCTCCGGCGGCCTTGGGGCCGACGGC GGGCGTCTGCTCTTATCCAG
Product: ABC transporter, substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Signal Peptide Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; ABC Transporter Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSLARILLDSAATTALVATMALSAPSVHAADKVSIMVGGYEKQIYLPAKLTEALGYFKDEGLDVELLNEPAGVDAENEML AGAVQGVVGFYDHCIDLQAKGKFVESVVQFSQAPGEVELVSTKHPEIKSPADFKGMSLGVTGLGSSTNFLTEYLAVKNGL KLGEFTSVPVGAGNTFIAAMQQDKIQAGMTTEPTITRLLKTGEAKVLIDMRTMEGTKAALGGTYPAASLYMQTDWVEAHK DIVQKLANAFVKTQKFINTHSGAEIADKMPKDYYVGDKEGYVKALDAGKAMFTPDGIMPEGGPETVLTVLSAFKKELQGK QIDLAKTYTSEFVKNAK
Sequences:
>Translated_337_residues MSLARILLDSAATTALVATMALSAPSVHAADKVSIMVGGYEKQIYLPAKLTEALGYFKDEGLDVELLNEPAGVDAENEML AGAVQGVVGFYDHCIDLQAKGKFVESVVQFSQAPGEVELVSTKHPEIKSPADFKGMSLGVTGLGSSTNFLTEYLAVKNGL KLGEFTSVPVGAGNTFIAAMQQDKIQAGMTTEPTITRLLKTGEAKVLIDMRTMEGTKAALGGTYPAASLYMQTDWVEAHK DIVQKLANAFVKTQKFINTHSGAEIADKMPKDYYVGDKEGYVKALDAGKAMFTPDGIMPEGGPETVLTVLSAFKKELQGK QIDLAKTYTSEFVKNAK >Mature_336_residues SLARILLDSAATTALVATMALSAPSVHAADKVSIMVGGYEKQIYLPAKLTEALGYFKDEGLDVELLNEPAGVDAENEMLA GAVQGVVGFYDHCIDLQAKGKFVESVVQFSQAPGEVELVSTKHPEIKSPADFKGMSLGVTGLGSSTNFLTEYLAVKNGLK LGEFTSVPVGAGNTFIAAMQQDKIQAGMTTEPTITRLLKTGEAKVLIDMRTMEGTKAALGGTYPAASLYMQTDWVEAHKD IVQKLANAFVKTQKFINTHSGAEIADKMPKDYYVGDKEGYVKALDAGKAMFTPDGIMPEGGPETVLTVLSAFKKELQGKQ IDLAKTYTSEFVKNAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36022; Mature: 35891
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLARILLDSAATTALVATMALSAPSVHAADKVSIMVGGYEKQIYLPAKLTEALGYFKDE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHCC GLDVELLNEPAGVDAENEMLAGAVQGVVGFYDHCIDLQAKGKFVESVVQFSQAPGEVELV CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE STKHPEIKSPADFKGMSLGVTGLGSSTNFLTEYLAVKNGLKLGEFTSVPVGAGNTFIAAM ECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE QQDKIQAGMTTEPTITRLLKTGEAKVLIDMRTMEGTKAALGGTYPAASLYMQTDWVEAHK HHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCHHHEEEEHHHHHHHH DIVQKLANAFVKTQKFINTHSGAEIADKMPKDYYVGDKEGYVKALDAGKAMFTPDGIMPE HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEECCCCCCCEEEECCCCEEECCCCCCCC GGPETVLTVLSAFKKELQGKQIDLAKTYTSEFVKNAK CCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC >Mature Secondary Structure SLARILLDSAATTALVATMALSAPSVHAADKVSIMVGGYEKQIYLPAKLTEALGYFKDE CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHCC GLDVELLNEPAGVDAENEMLAGAVQGVVGFYDHCIDLQAKGKFVESVVQFSQAPGEVELV CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE STKHPEIKSPADFKGMSLGVTGLGSSTNFLTEYLAVKNGLKLGEFTSVPVGAGNTFIAAM ECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE QQDKIQAGMTTEPTITRLLKTGEAKVLIDMRTMEGTKAALGGTYPAASLYMQTDWVEAHK HHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCHHHEEEEHHHHHHHH DIVQKLANAFVKTQKFINTHSGAEIADKMPKDYYVGDKEGYVKALDAGKAMFTPDGIMPE HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEECCCCCCCEEEECCCCEEECCCCCCCC GGPETVLTVLSAFKKELQGKQIDLAKTYTSEFVKNAK CCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA