| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476547
Identifier: 13476547
GI number: 13476547
Start: 6528651
End: 6529487
Strand: Direct
Name: 13476547
Synonym: mlr7896
Alternate gene names: NA
Gene position: 6528651-6529487 (Clockwise)
Preceding gene: 13476546
Following gene: 13476548
Centisome position: 92.79
GC content: 66.43
Gene sequence:
>837_bases ATGAGCCCGCTGGTCATCGGGCTCGCGCTTTTCGCGGCGATCCTGCACGCAAGCTGGAACGCTTTTCTGCGAACCGGCGC CGACAGGTTGTGGACAGTCACCGTCATGAGCTTCTCCGACACGGCGCTGGCCATTCCTCTCGCCATCTTCAACGGCTTTC CAGCCACGTCGGCCTGGCCCTATGTCGGGCTCTCGGCCTGCCTGCAGGTCGGCTACAGCGTGTTTCTGGTGGCTGCCTAC AGATATGGCGAGTTGGGACAGGTCTACCCGATTGTTCGCGGCAGCGTGCCTCTGCTCGTCACCCTTGGCGGCTTCCTGCT CGCCGGCCAACAGCTTACCGTTCCGGAGACCGTCGGTGTTGTCCTGGTCGGTGGCGGCATCATGGGTCTGTCGCTTGGAC GCGGAAGAGCCGCCACGACATCGATCCTCTATGCCCTGGCAACGGGAGCAATCATCGCCGTCTATGCGACGGTCGATGCG ATCGGCGTCCGTGCGGCGGGCAATGTCGGCGCCTACACCGCCTGGGTGCTGCTCGCCTATGGAGCCCTGCTGCCGGCGAC CTTCGTCGCTTGCCGCGGCCGGCTTCCTGTCGACCCGCGAGCGCCGGAAACCTGGAAGGCATTGGGCGGCGGCCTGTTCG CGCTTCTGGCCTACGGCGTCGTGGTCGCGGCTTTCGCGCTCGGGCCGGCCGGTCCGATCACCGCGATCCGCGAGACCAGT GTCGTCTTCGCGGCCTTCATCGGCCGGCTGTTTCTTGGCGAGACGCTGACGCCTCGGCGGGTTGGCGCCTGCGCCGTCGT CGCGCTCGGCGCCATCTGCCTCGGTTATCAATCGTGA
Upstream 100 bases:
>100_bases AAGGCGCCACCCTGATGGCGCAGATGGGGCAGGCTGACACCGCCCTTCGTGAAGCCCGCAAGACCGCCCTCGACATCATC GCCGCCTCGCGCAGGCCGCA
Downstream 100 bases:
>100_bases CGACAATGCATGCGCAGGCCGCCAACCAGGCGCGCATCCATGCTCTCGATCCAACCGCGCGCAGCCGCCTGAACGCCATC TTCATGGCGACGATGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; DMT Family Permease
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSPLVIGLALFAAILHASWNAFLRTGADRLWTVTVMSFSDTALAIPLAIFNGFPATSAWPYVGLSACLQVGYSVFLVAAY RYGELGQVYPIVRGSVPLLVTLGGFLLAGQQLTVPETVGVVLVGGGIMGLSLGRGRAATTSILYALATGAIIAVYATVDA IGVRAAGNVGAYTAWVLLAYGALLPATFVACRGRLPVDPRAPETWKALGGGLFALLAYGVVVAAFALGPAGPITAIRETS VVFAAFIGRLFLGETLTPRRVGACAVVALGAICLGYQS
Sequences:
>Translated_278_residues MSPLVIGLALFAAILHASWNAFLRTGADRLWTVTVMSFSDTALAIPLAIFNGFPATSAWPYVGLSACLQVGYSVFLVAAY RYGELGQVYPIVRGSVPLLVTLGGFLLAGQQLTVPETVGVVLVGGGIMGLSLGRGRAATTSILYALATGAIIAVYATVDA IGVRAAGNVGAYTAWVLLAYGALLPATFVACRGRLPVDPRAPETWKALGGGLFALLAYGVVVAAFALGPAGPITAIRETS VVFAAFIGRLFLGETLTPRRVGACAVVALGAICLGYQS >Mature_277_residues SPLVIGLALFAAILHASWNAFLRTGADRLWTVTVMSFSDTALAIPLAIFNGFPATSAWPYVGLSACLQVGYSVFLVAAYR YGELGQVYPIVRGSVPLLVTLGGFLLAGQQLTVPETVGVVLVGGGIMGLSLGRGRAATTSILYALATGAIIAVYATVDAI GVRAAGNVGAYTAWVLLAYGALLPATFVACRGRLPVDPRAPETWKALGGGLFALLAYGVVVAAFALGPAGPITAIRETSV VFAAFIGRLFLGETLTPRRVGACAVVALGAICLGYQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28554; Mature: 28423
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLVIGLALFAAILHASWNAFLRTGADRLWTVTVMSFSDTALAIPLAIFNGFPATSAWP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCC YVGLSACLQVGYSVFLVAAYRYGELGQVYPIVRGSVPLLVTLGGFLLAGQQLTVPETVGV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCE VLVGGGIMGLSLGRGRAATTSILYALATGAIIAVYATVDAIGVRAAGNVGAYTAWVLLAY EEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH GALLPATFVACRGRLPVDPRAPETWKALGGGLFALLAYGVVVAAFALGPAGPITAIRETS HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VVFAAFIGRLFLGETLTPRRVGACAVVALGAICLGYQS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPLVIGLALFAAILHASWNAFLRTGADRLWTVTVMSFSDTALAIPLAIFNGFPATSAWP CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCC YVGLSACLQVGYSVFLVAAYRYGELGQVYPIVRGSVPLLVTLGGFLLAGQQLTVPETVGV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCE VLVGGGIMGLSLGRGRAATTSILYALATGAIIAVYATVDAIGVRAAGNVGAYTAWVLLAY EEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH GALLPATFVACRGRLPVDPRAPETWKALGGGLFALLAYGVVVAAFALGPAGPITAIRETS HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VVFAAFIGRLFLGETLTPRRVGACAVVALGAICLGYQS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA