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The map label for this gene is yybR [H]

Identifier: 13476431

GI number: 13476431

Start: 6419383

End: 6419745

Strand: Reverse

Name: yybR [H]

Synonym: mll7749

Alternate gene names: 13476431

Gene position: 6419745-6419383 (Counterclockwise)

Preceding gene: 13476433

Following gene: 13476427

Centisome position: 91.24

GC content: 59.23

Gene sequence:

>363_bases
ATGCCGCGCATTCGTCATGAACGATTCGATTGCAGCCCCGGCTGCACCGTGGAGGGAACGCTGCGCTATATCGACGGAAA
GTGGAAAGGCGTCGTGCTCTACCATCTGTTCGAGGGTACGCTGCGCTTCAACGAAATCCGCCGGCGCATTCCGAACTGCA
CGCAGCGCATGCTGACCAATCAGTTGCGCGAACTGGAAGCCGATGGGCTGATTGATCGCAAGATCTATCCGGAAGTGCCG
CCGAAGGTGGAATACAGCCTGACACCGCGTGGCAGAAGCCTGGCGCCGGTGATCACCGCCTTGAAAGAATGGGGCGATGC
GAATGTGACGCTGGCGCCGGAGGTTTCGCAGGTTGCAGCATAA

Upstream 100 bases:

>100_bases
GCGATTGCTGTTGAGCTTTGTCTGGGGCAGAGATGCGGATTATGTGCGTCAAGCGCAAGAATGCACATATAAAGCACATA
GTGTCGAAAAGGATACCGTG

Downstream 100 bases:

>100_bases
AGCGGCAGTGAGCGCTGTTCCCTGAATGGGTTCACGGGGACGGCGGAGCGTCCGGAGGGATCGATCCCGGTGATGCTGAA
AACAGCGCGGCTAGCACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPRIRHERFDCSPGCTVEGTLRYIDGKWKGVVLYHLFEGTLRFNEIRRRIPNCTQRMLTNQLRELEADGLIDRKIYPEVP
PKVEYSLTPRGRSLAPVITALKEWGDANVTLAPEVSQVAA

Sequences:

>Translated_120_residues
MPRIRHERFDCSPGCTVEGTLRYIDGKWKGVVLYHLFEGTLRFNEIRRRIPNCTQRMLTNQLRELEADGLIDRKIYPEVP
PKVEYSLTPRGRSLAPVITALKEWGDANVTLAPEVSQVAA
>Mature_119_residues
PRIRHERFDCSPGCTVEGTLRYIDGKWKGVVLYHLFEGTLRFNEIRRRIPNCTQRMLTNQLRELEADGLIDRKIYPEVPP
KVEYSLTPRGRSLAPVITALKEWGDANVTLAPEVSQVAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=104, Percent_Identity=40.3846153846154, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13737; Mature: 13606

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIRHERFDCSPGCTVEGTLRYIDGKWKGVVLYHLFEGTLRFNEIRRRIPNCTQRMLTN
CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEHHCHHHHHHHHHHCCHHHHHHHHH
QLRELEADGLIDRKIYPEVPPKVEYSLTPRGRSLAPVITALKEWGDANVTLAPEVSQVAA
HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCHHHHCC
>Mature Secondary Structure 
PRIRHERFDCSPGCTVEGTLRYIDGKWKGVVLYHLFEGTLRFNEIRRRIPNCTQRMLTN
CCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEHHCHHHHHHHHHHCCHHHHHHHHH
QLRELEADGLIDRKIYPEVPPKVEYSLTPRGRSLAPVITALKEWGDANVTLAPEVSQVAA
HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]