| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is sam [H]
Identifier: 13476395
GI number: 13476395
Start: 6381999
End: 6383042
Strand: Direct
Name: sam [H]
Synonym: mlr7703
Alternate gene names: 13476395
Gene position: 6381999-6383042 (Clockwise)
Preceding gene: 13476394
Following gene: 13476399
Centisome position: 90.7
GC content: 66.09
Gene sequence:
>1044_bases GTGGCGCGCCTATGGCATCAGGCATATCGAGATGCCGGCGACGCCGGCGCGCATCTGGGCCGCGATCAGGGGCGCATCGC CGACGTGACATCAGGGGCGGAACCAGGAACGACGGGCGGCCACGGCACGCTGAGGGGGATCGCGCTGAAGATCGTCTCGG TGGCGGTTTTTGTCGGCATGCAAACCTGCATCAAGGCGGCCGGCGACGTGCCGGCCGGGCAGATCGTCTTCTTCCGCTCC TTCTTCGCCATCTTCCCGATCATTGCCTTCCTGGCATTGAAGGGACAGCTGCCGACGGCATTCGTCACCAAACGTCCCTT CAACCATGTCGCGCGCGGCGTCGTCGGCGTCGGTGCCATGGGCCTGGGCTTCTTCGCGCTCACCAGGCTGCCGCTGCCGG AGGCGATCACCCTGAACTATGCGCAGCCGCTGCTGGTCGTGGTGTTCTCCTCGGTCTTCCTTGGCGAGTCGATCCGCGTC TATCGCTGGAGCGCGGTTGCCGTCGGCCTCATCGGCGTGCTCATCATCTCCTGGCCGGAGCTGACGCTGCTCAATTCGGA TGAAGGGCTCGACGACCAGGAGGTCCTGGGCGTCATGGCCGCGCTGGTGGCCGCGGCGATCTCGGCGGTCGCCATGCTGC TTGTGCGCAATCTCGTGCAGACGGAGAAGACGGCGACCATCGTCCTGTGGTTCTCGTCGACCGCGAGCGTGCTCTCGCTG CTGACGCTGCCTTTCGGCTGGCAGTCGCTGACGCCGGTGCAAGCCGCGCTGCTCGTCATGGCGGGCTTCTGCGGCGGCCT CGGCCAGATCCTGATGACCTCGGCCTATCGCCATGCCGAGGCCTCGGTGGTGGCGCCGTTCGAATACACCTCGATGATCC TCGGCGTCGTCGTCGGCTATTTCATTTTCGGCGACGTGACCTCGCTCAACACGCTGATTGGCGGTGCGATCGTGGTGGCC GCCGGCGTCTTCATCATCTGGCGCGAGCGGCAACTGGGCCTGGAGCGCACGCGAACGCGCAAGGTGACATTGCCGCAGGG GTGA
Upstream 100 bases:
>100_bases ACGTGCCTTCAACCACCAATGCGCTGGGCATCAAGGGCGCGGGCGAGGCCGGCACGATCGGCTCGACACCGGCGGCGCTC AACGCCGTCACCGATGCGCT
Downstream 100 bases:
>100_bases GGAGAGGTCCGCGTAGCGGACGGAAAGCCAATTGCTTGGCTTTCCGAACGACGAACGCCCGGAGGGCTGGGGAGCGATGG CGAAGGGCCGATCTCCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MARLWHQAYRDAGDAGAHLGRDQGRIADVTSGAEPGTTGGHGTLRGIALKIVSVAVFVGMQTCIKAAGDVPAGQIVFFRS FFAIFPIIAFLALKGQLPTAFVTKRPFNHVARGVVGVGAMGLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLGESIRV YRWSAVAVGLIGVLIISWPELTLLNSDEGLDDQEVLGVMAALVAAAISAVAMLLVRNLVQTEKTATIVLWFSSTASVLSL LTLPFGWQSLTPVQAALLVMAGFCGGLGQILMTSAYRHAEASVVAPFEYTSMILGVVVGYFIFGDVTSLNTLIGGAIVVA AGVFIIWRERQLGLERTRTRKVTLPQG
Sequences:
>Translated_347_residues MARLWHQAYRDAGDAGAHLGRDQGRIADVTSGAEPGTTGGHGTLRGIALKIVSVAVFVGMQTCIKAAGDVPAGQIVFFRS FFAIFPIIAFLALKGQLPTAFVTKRPFNHVARGVVGVGAMGLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLGESIRV YRWSAVAVGLIGVLIISWPELTLLNSDEGLDDQEVLGVMAALVAAAISAVAMLLVRNLVQTEKTATIVLWFSSTASVLSL LTLPFGWQSLTPVQAALLVMAGFCGGLGQILMTSAYRHAEASVVAPFEYTSMILGVVVGYFIFGDVTSLNTLIGGAIVVA AGVFIIWRERQLGLERTRTRKVTLPQG >Mature_346_residues ARLWHQAYRDAGDAGAHLGRDQGRIADVTSGAEPGTTGGHGTLRGIALKIVSVAVFVGMQTCIKAAGDVPAGQIVFFRSF FAIFPIIAFLALKGQLPTAFVTKRPFNHVARGVVGVGAMGLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLGESIRVY RWSAVAVGLIGVLIISWPELTLLNSDEGLDDQEVLGVMAALVAAAISAVAMLLVRNLVQTEKTATIVLWFSSTASVLSLL TLPFGWQSLTPVQAALLVMAGFCGGLGQILMTSAYRHAEASVVAPFEYTSMILGVVVGYFIFGDVTSLNTLIGGAIVVAA GVFIIWRERQLGLERTRTRKVTLPQG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 36819; Mature: 36688
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLWHQAYRDAGDAGAHLGRDQGRIADVTSGAEPGTTGGHGTLRGIALKIVSVAVFVGM CCHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QTCIKAAGDVPAGQIVFFRSFFAIFPIIAFLALKGQLPTAFVTKRPFNHVARGVVGVGAM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHH GLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLGESIRVYRWSAVAVGLIGVLIISWPE HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC LTLLNSDEGLDDQEVLGVMAALVAAAISAVAMLLVRNLVQTEKTATIVLWFSSTASVLSL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH LTLPFGWQSLTPVQAALLVMAGFCGGLGQILMTSAYRHAEASVVAPFEYTSMILGVVVGY HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHH FIFGDVTSLNTLIGGAIVVAAGVFIIWRERQLGLERTRTRKVTLPQG HHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHCHHHHCCEEECCCCC >Mature Secondary Structure ARLWHQAYRDAGDAGAHLGRDQGRIADVTSGAEPGTTGGHGTLRGIALKIVSVAVFVGM CHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QTCIKAAGDVPAGQIVFFRSFFAIFPIIAFLALKGQLPTAFVTKRPFNHVARGVVGVGAM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHH GLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLGESIRVYRWSAVAVGLIGVLIISWPE HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC LTLLNSDEGLDDQEVLGVMAALVAAAISAVAMLLVRNLVQTEKTATIVLWFSSTASVLSL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH LTLPFGWQSLTPVQAALLVMAGFCGGLGQILMTSAYRHAEASVVAPFEYTSMILGVVVGY HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHH FIFGDVTSLNTLIGGAIVVAAGVFIIWRERQLGLERTRTRKVTLPQG HHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHCHHHHCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]