| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is cutL [H]
Identifier: 13476394
GI number: 13476394
Start: 6379735
End: 6382086
Strand: Direct
Name: cutL [H]
Synonym: mlr7702
Alternate gene names: 13476394
Gene position: 6379735-6382086 (Clockwise)
Preceding gene: 13476391
Following gene: 13476395
Centisome position: 90.67
GC content: 63.9
Gene sequence:
>2352_bases ATGCCTATTTCAGGCGTTCGTTCTCCACATCCCCGCGAGGCAGCCATGACCGTCGTCACACCGAAATTCGGCATGGGCGC TTCCGTGCTGCGGCGCGAGGATGCCGCCTTCATCCAGGGTCAGGGCCGCTATACCGACGATATCCAGCCCGCCGGCGTCC TGCACGGCTATGTTCTGCGCTCGCCGATCGCCAAGGCGAGCTTTACCATCGGCTCGATCGAGGCGGCGAAGGCGGCACCC GGCGTCCATCTGGTGCTGACCGGTGGGGATCTCACCCATCTGCGCGATCTCAAGTCCGGCGTCATGCAGCCACAGCCGGA CGGCACCAAAGCGCCGACGCGCGACATTCCGATCCTGTGCCGGGACCGCGTCAACTATGTCGGCGATGCGGTTGCCTTTG TCGTCGCCGACAGCCGTGCCTTGGCGCAGGATGCCGCCGAACTGATCGAGGTCGATTATGACGGCGAGGACGCCGCCTCA GGCACGGCGACGGCGCTTGCCGAGGGCACGCCGCTGGTCTGGCCGGAACTCGGCTCCAACCGCGCCTTCACCTATCATAT GGGCGACAAGAAAAAGACGGACGCGGCTTTCGCTGGGGCCGCTCACGTCACTCGCATCGAATTCGTCAACAATCGGCTGG TCTGCAACTACATGGAGCCGCGCTCGGCGATCGGCGAATGGAATGTCGGGGAAAACCGCTTCGTGCTGACCACCGGGTCG CAGGGCGTGCATTCCATGCAGTACATCCTGGCCAGTGTGTTCAAGATCAAGAAGGACCAACTGCGCGTCATCACGCCCGA TGTCGGCGGCGGTTTCGGGCCGAAGAGCTTCGTCTACCGCGAATATCCGCTGGTGCTCGAGGCGGCGAAGCGGCTTGGCC GTCCGGTGAAATGGGCCGGCGACCGCACCGAGCACTTCCTCACCGACGCCCAAGGCCGCGACAATGCGGTGACGGCCGAG ATGGCGCTCGACAAGGATGGCCGCTTCCTCGGCATGAGGGTCGATCTGCTTGCCAATATCGGCGCCTATATCTCGCAATA TGGCCCTTTCATTCCGTATATCGGCGTCACCATGTCGACCGGCGTCTATGATATCAGGGCGCTCGATGTCTCGGTGACCG GCCTCTACACCAACACCTGCCCGGTCGACGCTTATCGCGGCGCCGGCCGTCCCGAGGCGGCGTTCCTGTTGGAAAAACTT GTCGATGCCTGCGCGCATGATCTCGGCCTGCCTGTCGAAGAGATCCGCCGCCGCAACTTCATTCGGCCCGAGCAGTTTCC CTATCGCACGCAGACCGGCCGGCTCTACGACAATGGCGAATTCGAAGGCCATATGGACCGCGCCATCGAACGGTCGCAGT GGAAGGCGTTTCCGCAGCGGCTGGAGCAGTCCAAAGCCGATGGCAAGATCCGCGGCATCGGTATGGCCACCTATATCGAG GCCTGCGCCTTTCCGGGCTCCGAACCGGCCTTTGTCGAGCTCAATGGCGACGGCACGGTGACGCTGAAGATCGGCACCCA GACCAACGGCCAGGGGCATGCCACCGCCTATGCGCAGTTCCTGTCGGAAAAACTCAATCTCGACATCGACAAGATCCATG TCCGCCAGGGCGACACCGACGAATTGAAGGCGGGCGGCGGCACAGGCGGCTCGCGCTCCATTCCGCTGGGGGGTGTCTCG GCTTCCCGCGCCGGTGAGGACCTGGCCAACAAGATCAAGCGCATCGCCGCCGATGAGCTTGAGGCCTCGGCCGGCGATAT CGAACTGTCCGATGGTGTTGCCCGCATCGTCGGCACCGACCGGAGCATCGATTTCTCGAGCATCGCCAAGGCTGCGAAGA CGCCGGATGACCTTAAGGGATTCGGCGAGTTCGTACAGGACGAGTGCACCTATCCGAACGGCACCCACATCTGCGAGGTC GAGATCGATCCCGACACCGGCGCGACCGAGATTGTCCGCTACACCATCGTCGACGATTTCGGCGTCACGGTGAATCCGAT CCTGCTCGCAGGCCAGGTGCATGGCGGCGTCGTGCAAGGCATCGGCCAGGCGTTGACCGAGAACACCATCCATGGCGAGG ATGGGCAGCTCTTGACGGCGAGCTTCATGGACTACGCCATGCCGCGCGCCGACAATTTCCCGTTCTTCCATTTCGAGACC CGCAACGTGCCTTCAACCACCAATGCGCTGGGCATCAAGGGCGCGGGCGAGGCCGGCACGATCGGCTCGACACCGGCGGC GCTCAACGCCGTCACCGATGCGCTGTGGCGCGCCTATGGCATCAGGCATATCGAGATGCCGGCGACGCCGGCGCGCATCT GGGCCGCGATCAGGGGCGCATCGCCGACGTGA
Upstream 100 bases:
>100_bases TTTTTCCTGTCGATTGCGTTGGACGCGGAGTTCCCGCTGGTCCAAGAAATTTGAAGTCCGCGCTCTTTACACGAAATGGT CCCTCGACAAAACTCGGCCG
Downstream 100 bases:
>100_bases CATCAGGGGCGGAACCAGGAACGACGGGCGGCCACGGCACGCTGAGGGGGATCGCGCTGAAGATCGTCTCGGTGGCGGTT TTTGTCGGCATGCAAACCTG
Product: putative dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MPISGVRSPHPREAAMTVVTPKFGMGASVLRREDAAFIQGQGRYTDDIQPAGVLHGYVLRSPIAKASFTIGSIEAAKAAP GVHLVLTGGDLTHLRDLKSGVMQPQPDGTKAPTRDIPILCRDRVNYVGDAVAFVVADSRALAQDAAELIEVDYDGEDAAS GTATALAEGTPLVWPELGSNRAFTYHMGDKKKTDAAFAGAAHVTRIEFVNNRLVCNYMEPRSAIGEWNVGENRFVLTTGS QGVHSMQYILASVFKIKKDQLRVITPDVGGGFGPKSFVYREYPLVLEAAKRLGRPVKWAGDRTEHFLTDAQGRDNAVTAE MALDKDGRFLGMRVDLLANIGAYISQYGPFIPYIGVTMSTGVYDIRALDVSVTGLYTNTCPVDAYRGAGRPEAAFLLEKL VDACAHDLGLPVEEIRRRNFIRPEQFPYRTQTGRLYDNGEFEGHMDRAIERSQWKAFPQRLEQSKADGKIRGIGMATYIE ACAFPGSEPAFVELNGDGTVTLKIGTQTNGQGHATAYAQFLSEKLNLDIDKIHVRQGDTDELKAGGGTGGSRSIPLGGVS ASRAGEDLANKIKRIAADELEASAGDIELSDGVARIVGTDRSIDFSSIAKAAKTPDDLKGFGEFVQDECTYPNGTHICEV EIDPDTGATEIVRYTIVDDFGVTVNPILLAGQVHGGVVQGIGQALTENTIHGEDGQLLTASFMDYAMPRADNFPFFHFET RNVPSTTNALGIKGAGEAGTIGSTPAALNAVTDALWRAYGIRHIEMPATPARIWAAIRGASPT
Sequences:
>Translated_783_residues MPISGVRSPHPREAAMTVVTPKFGMGASVLRREDAAFIQGQGRYTDDIQPAGVLHGYVLRSPIAKASFTIGSIEAAKAAP GVHLVLTGGDLTHLRDLKSGVMQPQPDGTKAPTRDIPILCRDRVNYVGDAVAFVVADSRALAQDAAELIEVDYDGEDAAS GTATALAEGTPLVWPELGSNRAFTYHMGDKKKTDAAFAGAAHVTRIEFVNNRLVCNYMEPRSAIGEWNVGENRFVLTTGS QGVHSMQYILASVFKIKKDQLRVITPDVGGGFGPKSFVYREYPLVLEAAKRLGRPVKWAGDRTEHFLTDAQGRDNAVTAE MALDKDGRFLGMRVDLLANIGAYISQYGPFIPYIGVTMSTGVYDIRALDVSVTGLYTNTCPVDAYRGAGRPEAAFLLEKL VDACAHDLGLPVEEIRRRNFIRPEQFPYRTQTGRLYDNGEFEGHMDRAIERSQWKAFPQRLEQSKADGKIRGIGMATYIE ACAFPGSEPAFVELNGDGTVTLKIGTQTNGQGHATAYAQFLSEKLNLDIDKIHVRQGDTDELKAGGGTGGSRSIPLGGVS ASRAGEDLANKIKRIAADELEASAGDIELSDGVARIVGTDRSIDFSSIAKAAKTPDDLKGFGEFVQDECTYPNGTHICEV EIDPDTGATEIVRYTIVDDFGVTVNPILLAGQVHGGVVQGIGQALTENTIHGEDGQLLTASFMDYAMPRADNFPFFHFET RNVPSTTNALGIKGAGEAGTIGSTPAALNAVTDALWRAYGIRHIEMPATPARIWAAIRGASPT >Mature_782_residues PISGVRSPHPREAAMTVVTPKFGMGASVLRREDAAFIQGQGRYTDDIQPAGVLHGYVLRSPIAKASFTIGSIEAAKAAPG VHLVLTGGDLTHLRDLKSGVMQPQPDGTKAPTRDIPILCRDRVNYVGDAVAFVVADSRALAQDAAELIEVDYDGEDAASG TATALAEGTPLVWPELGSNRAFTYHMGDKKKTDAAFAGAAHVTRIEFVNNRLVCNYMEPRSAIGEWNVGENRFVLTTGSQ GVHSMQYILASVFKIKKDQLRVITPDVGGGFGPKSFVYREYPLVLEAAKRLGRPVKWAGDRTEHFLTDAQGRDNAVTAEM ALDKDGRFLGMRVDLLANIGAYISQYGPFIPYIGVTMSTGVYDIRALDVSVTGLYTNTCPVDAYRGAGRPEAAFLLEKLV DACAHDLGLPVEEIRRRNFIRPEQFPYRTQTGRLYDNGEFEGHMDRAIERSQWKAFPQRLEQSKADGKIRGIGMATYIEA CAFPGSEPAFVELNGDGTVTLKIGTQTNGQGHATAYAQFLSEKLNLDIDKIHVRQGDTDELKAGGGTGGSRSIPLGGVSA SRAGEDLANKIKRIAADELEASAGDIELSDGVARIVGTDRSIDFSSIAKAAKTPDDLKGFGEFVQDECTYPNGTHICEVE IDPDTGATEIVRYTIVDDFGVTVNPILLAGQVHGGVVQGIGQALTENTIHGEDGQLLTASFMDYAMPRADNFPFFHFETR NVPSTTNALGIKGAGEAGTIGSTPAALNAVTDALWRAYGIRHIEMPATPARIWAAIRGASPT
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=781, Percent_Identity=23.943661971831, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI91823271, Length=690, Percent_Identity=24.4927536231884, Blast_Score=124, Evalue=4e-28, Organism=Escherichia coli, GI1789246, Length=814, Percent_Identity=26.044226044226, Blast_Score=209, Evalue=5e-55, Organism=Escherichia coli, GI1789230, Length=773, Percent_Identity=28.4605433376455, Blast_Score=206, Evalue=6e-54, Organism=Escherichia coli, GI1786478, Length=726, Percent_Identity=24.3801652892562, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540638, Length=772, Percent_Identity=24.740932642487, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17539860, Length=764, Percent_Identity=25.261780104712, Blast_Score=139, Evalue=6e-33, Organism=Caenorhabditis elegans, GI32566215, Length=568, Percent_Identity=25.8802816901408, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17737937, Length=767, Percent_Identity=22.8161668839635, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI24647199, Length=730, Percent_Identity=21.7808219178082, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84200; Mature: 84069
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISGVRSPHPREAAMTVVTPKFGMGASVLRREDAAFIQGQGRYTDDIQPAGVLHGYVLR CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHH SPIAKASFTIGSIEAAKAAPGVHLVLTGGDLTHLRDLKSGVMQPQPDGTKAPTRDIPILC CCHHHHEEEECCCCHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH RDRVNYVGDAVAFVVADSRALAQDAAELIEVDYDGEDAASGTATALAEGTPLVWPELGSN HHHHHHHHHEEEEEEECCHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCCCEECCCCCCC RAFTYHMGDKKKTDAAFAGAAHVTRIEFVNNRLVCNYMEPRSAIGEWNVGENRFVLTTGS CEEEEECCCCCCCCHHHCCCHHEEEEEEECCEEEEEECCHHHHCCCCCCCCCEEEEECCC QGVHSMQYILASVFKIKKDQLRVITPDVGGGFGPKSFVYREYPLVLEAAKRLGRPVKWAG CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHCCCEECCC DRTEHFLTDAQGRDNAVTAEMALDKDGRFLGMRVDLLANIGAYISQYGPFIPYIGVTMST CCHHHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECC GVYDIRALDVSVTGLYTNTCPVDAYRGAGRPEAAFLLEKLVDACAHDLGLPVEEIRRRNF CEEEEEEEEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCC IRPEQFPYRTQTGRLYDNGEFEGHMDRAIERSQWKAFPQRLEQSKADGKIRGIGMATYIE CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH ACAFPGSEPAFVELNGDGTVTLKIGTQTNGQGHATAYAQFLSEKLNLDIDKIHVRQGDTD HHCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHH ELKAGGGTGGSRSIPLGGVSASRAGEDLANKIKRIAADELEASAGDIELSDGVARIVGTD HHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECC RSIDFSSIAKAAKTPDDLKGFGEFVQDECTYPNGTHICEVEIDPDTGATEIVRYTIVDDF CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECC GVTVNPILLAGQVHGGVVQGIGQALTENTIHGEDGQLLTASFMDYAMPRADNFPFFHFET CCEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCCCCCEEEEEC RNVPSTTNALGIKGAGEAGTIGSTPAALNAVTDALWRAYGIRHIEMPATPARIWAAIRGA CCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCC SPT CCC >Mature Secondary Structure PISGVRSPHPREAAMTVVTPKFGMGASVLRREDAAFIQGQGRYTDDIQPAGVLHGYVLR CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHH SPIAKASFTIGSIEAAKAAPGVHLVLTGGDLTHLRDLKSGVMQPQPDGTKAPTRDIPILC CCHHHHEEEECCCCHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH RDRVNYVGDAVAFVVADSRALAQDAAELIEVDYDGEDAASGTATALAEGTPLVWPELGSN HHHHHHHHHEEEEEEECCHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCCCEECCCCCCC RAFTYHMGDKKKTDAAFAGAAHVTRIEFVNNRLVCNYMEPRSAIGEWNVGENRFVLTTGS CEEEEECCCCCCCCHHHCCCHHEEEEEEECCEEEEEECCHHHHCCCCCCCCCEEEEECCC QGVHSMQYILASVFKIKKDQLRVITPDVGGGFGPKSFVYREYPLVLEAAKRLGRPVKWAG CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHCCCEECCC DRTEHFLTDAQGRDNAVTAEMALDKDGRFLGMRVDLLANIGAYISQYGPFIPYIGVTMST CCHHHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECC GVYDIRALDVSVTGLYTNTCPVDAYRGAGRPEAAFLLEKLVDACAHDLGLPVEEIRRRNF CEEEEEEEEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCC IRPEQFPYRTQTGRLYDNGEFEGHMDRAIERSQWKAFPQRLEQSKADGKIRGIGMATYIE CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH ACAFPGSEPAFVELNGDGTVTLKIGTQTNGQGHATAYAQFLSEKLNLDIDKIHVRQGDTD HHCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHH ELKAGGGTGGSRSIPLGGVSASRAGEDLANKIKRIAADELEASAGDIELSDGVARIVGTD HHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECC RSIDFSSIAKAAKTPDDLKGFGEFVQDECTYPNGTHICEVEIDPDTGATEIVRYTIVDDF CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECC GVTVNPILLAGQVHGGVVQGIGQALTENTIHGEDGQLLTASFMDYAMPRADNFPFFHFET CCEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCCCCCEEEEEC RNVPSTTNALGIKGAGEAGTIGSTPAALNAVTDALWRAYGIRHIEMPATPARIWAAIRGA CCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCC SPT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]