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The map label for this gene is puuR [H]

Identifier: 13476370

GI number: 13476370

Start: 6349771

End: 6350388

Strand: Reverse

Name: puuR [H]

Synonym: mll7669

Alternate gene names: 13476370

Gene position: 6350388-6349771 (Counterclockwise)

Preceding gene: 13476371

Following gene: 13476369

Centisome position: 90.25

GC content: 61.17

Gene sequence:

>618_bases
ATGAACAAGATCGATACCCACAACAGCAAGGGCGGCGACGAGCGCTCTACCGCCACCAACCTGGTACGGCTCGGTACAAG
GTTGAAGCTCTCCCGGCAGACGCGTGGCCTGACCTTGAAGGCGCTCGCCGCCGCCGCCAACTGCTCCGAAAGCCTGCTTT
CCAAGGTCGAGAACGGCAAGGTCTCACCCTCGCTACCCATGCTTCACCGGTTGGTCGAGGTGCTCGGCACCAACATTGGC
TGGATGTTCGAGGAGGCCGATGGCGAGGAAGGCATCGTCTTTCGCGCCGGAGCACGGCCGTTGATCGCGCTCGATCCGCT
CAGGCGCGGCGAAGGCATATCGCTGGAACGCGTCATTCCCTATTCGCCGGGCCACCTTCTGCAGTGCAACATCCATCATA
TCGAGGCGGGCGGTGAAAGCGCCGGTCCAATCCAGCATGCCGGTGAGGAAGTCGGCTATCTGCTGGAAGGCGCCATCGAA
CTGATGGTCGGTGAAAAGACGTTTCGCCTGTCCGCCGGCGATTCCTTCGTTTTCAACTCGGAACTGCCGCACTGGTACCG
CAATGTCGGCGACGAACGCGCCAGCATTTTCTGGGTGAATACGCCGGCGACATTCTGA

Upstream 100 bases:

>100_bases
TTGGCTCGATCCGATGCATCGTCCGTTTTTCACAGGATGGACAACGCCCGGGATCGGTTTTACGAGTCAGCCCGACCAGC
GGAGATGTTCGCGCCCCCCA

Downstream 100 bases:

>100_bases
TCTGGCCAGCCCCCTTCTCCTTTCGCAGACGCTAATTCAAGTCACTTGACAAGAAATCAAGTATCTTGAATTATGCATCT
GCGCTCAGCGCCAGATGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNKIDTHNSKGGDERSTATNLVRLGTRLKLSRQTRGLTLKALAAAANCSESLLSKVENGKVSPSLPMLHRLVEVLGTNIG
WMFEEADGEEGIVFRAGARPLIALDPLRRGEGISLERVIPYSPGHLLQCNIHHIEAGGESAGPIQHAGEEVGYLLEGAIE
LMVGEKTFRLSAGDSFVFNSELPHWYRNVGDERASIFWVNTPATF

Sequences:

>Translated_205_residues
MNKIDTHNSKGGDERSTATNLVRLGTRLKLSRQTRGLTLKALAAAANCSESLLSKVENGKVSPSLPMLHRLVEVLGTNIG
WMFEEADGEEGIVFRAGARPLIALDPLRRGEGISLERVIPYSPGHLLQCNIHHIEAGGESAGPIQHAGEEVGYLLEGAIE
LMVGEKTFRLSAGDSFVFNSELPHWYRNVGDERASIFWVNTPATF
>Mature_205_residues
MNKIDTHNSKGGDERSTATNLVRLGTRLKLSRQTRGLTLKALAAAANCSESLLSKVENGKVSPSLPMLHRLVEVLGTNIG
WMFEEADGEEGIVFRAGARPLIALDPLRRGEGISLERVIPYSPGHLLQCNIHHIEAGGESAGPIQHAGEEVGYLLEGAIE
LMVGEKTFRLSAGDSFVFNSELPHWYRNVGDERASIFWVNTPATF

Specific function: Represses puuD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=181, Percent_Identity=29.2817679558011, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 22346; Mature: 22346

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIDTHNSKGGDERSTATNLVRLGTRLKLSRQTRGLTLKALAAAANCSESLLSKVENGK
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHCCHHHHHHHHHCCC
VSPSLPMLHRLVEVLGTNIGWMFEEADGEEGIVFRAGARPLIALDPLRRGEGISLERVIP
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCEEEECC
YSPGHLLQCNIHHIEAGGESAGPIQHAGEEVGYLLEGAIELMVGEKTFRLSAGDSFVFNS
CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCEEECC
ELPHWYRNVGDERASIFWVNTPATF
CCCHHHHHCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MNKIDTHNSKGGDERSTATNLVRLGTRLKLSRQTRGLTLKALAAAANCSESLLSKVENGK
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHCCHHHHHHHHHCCC
VSPSLPMLHRLVEVLGTNIGWMFEEADGEEGIVFRAGARPLIALDPLRRGEGISLERVIP
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCEEEECC
YSPGHLLQCNIHHIEAGGESAGPIQHAGEEVGYLLEGAIELMVGEKTFRLSAGDSFVFNS
CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCEEECC
ELPHWYRNVGDERASIFWVNTPATF
CCCHHHHHCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]