| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is glgP [H]
Identifier: 13476302
GI number: 13476302
Start: 6270559
End: 6273075
Strand: Direct
Name: glgP [H]
Synonym: mlr7586
Alternate gene names: 13476302
Gene position: 6270559-6273075 (Clockwise)
Preceding gene: 13476301
Following gene: 13476303
Centisome position: 89.12
GC content: 62.81
Gene sequence:
>2517_bases ATGAATGGTGAAAGCCGGTATGATCGTGGCAACCGCACGAGAGGCAGCATGACGCGAGCGATGACATCCGAAACCCTTCC GCCCCTGCTCGAAAATCCTGATCCGAAGACGCTCGCAAGGGAAGTCTTGGTGGTCCTCAAATACCGGGTCGGCAAGGACA CCACCGTTGCGACCCAGTACGACTGGCTGACGGCCTCGATCAAGGTCGTGCGTGACCGCATCGTCGATCGCTGGATGCAG GCAACCAAAGAGGCTTATGATCAGCAGGAAAAGCGCGTCTACTATCTGTCGCTGGAGTTCCTCATCGGCCGCCTGATGCG CGACGCCTTCTCCAATCTTGGCCTGATGGACAATATGCGCGAGGCGCTGTCGTCGCTCGGCGTCGACCTCGATCTCATCG CGGCGCTGGAACCCGACGCCGCGCTTGGCAATGGCGGCCTTGGCCGGCTTGCCGCCTGCTTCATGGAAAGCATGGCGACC GTCGACATCCCCGCGCATGGCTATGGCATCCGCTACGCTAACGGCATGTTCCGCCAGGAAATCCACGACGGCTGGCAGGT CGAACTGCCCGAGACCTGGCTCGATCACGGCAACCCCTGGGAGTTTGAACGGCGCGAACGCTCCTTCGAAGTCGGCTTCG GCGGTTCGGTGGAGTCCATCACGTCAAAGGACGGCCGGCTCGAGCGCCACGTCTGGAAGCCGACCGAACACGTCCTGGCT GTCGCCTACGACACGCCTGTCGTCGGCTGGCGGGGCAACCGCGTCAACACGCTGCGGCTGTGGTCGGGCATGCCGGTCGA CCCGATCCTGCTCGACAAGTTCAATGCCGGCGACCACATCGGCGCGCTCGCCGAAAGCAACAAGGCGGACGCGCTGTCAC GCGTGCTTTACCCCGCCGATTCCCACATGGCCGGGCAGGAACTCAGGCTGCGACAGGAATATTTCTTCTCAACCGCCTCG CTGCAGGACATCGTGCAGCGCCATCTCAGCCAGTATGGCGACCTGAAGTCGCTGCCCGACAAGGCGGCGATCCACTTGAA CGACACCCACCCGGCGATCGCCGTGCCGGAGCTGATGCGGCTGTTGATGGATGTCCACGGCATGGACTTCGACCTCGCCT GGGACATCACCAAGCGCACCTTCGGCTACACCAACCACACGCTTCTTCCCGAAGCGCTGGAAAGCTGGCCGGTGCCGCTG TTCGAGCGGCTTTTGCCGCGCCATATGCAGATCGTCTACGCCATCAACGCGCAGGTGCTTCTGGAGGCACGCGCCACCGA CCAGTTCTCGGGCGAGCAGATCAGCCATATTTCGCTGATCCAGGAAAATGGCGACCGCCGCGTGCGCATGGGCAATCTGG CCTTTGTCGGCTCGCACTCGATCAATGGTGTGTCGGCGCTGCATACCGAGCTGATGAAGGAAACGGTGTTCGCCGACCTG CACAAGCTCTATCCCGATCGCATCAACAACAAGACCAACGGCATCACGCCGCGGCGCTGGCTGATCCAGTGCAACCCCGG CCTGACCTCGCTCGCCCGCGAGGCGATCGGTGACCGTTTTCTCGATGACATCGACGCCATCAAAGGGCTCGACAGCTTTG CCGACGACAGCGCGTTCCGGGAGAAGTTCGCGGGCGTCAAGCGCCAGAACAAGGCGCGGCTGGCCAATCTCGTCGCCGAC CGGCTTGGCATCAAGGTCGACCCGTCGGCGCTGTTCGACATCCAGGTCAAGCGCATCCACGAATACAAGCGCCAGCTTCT GAACATCCTCGAGGCGATCGCGCTCTACGACCAGATCCGCTCGCATCCCGAGCGCGACTGGATGCCGCGCGTGAAATTCT TTGGCGGCAAGGCGGCGCCCAGCTACCACAACGCCAAGCTGATCATCAAACTCGCCAATGATGTCGCCAGGGTCATCAAC CGTGACCCGGCGGTGCGCGGCTTGCTGAAGGTGGTGTTCGTGCCGAACTACAATGTCAGCCTGGCTGAGGTCATGATGCC GGCCGCCGACCTGTCGGAGCAGATATCGACCGCCGGCATGGAAGCGTCGGGCACCGGCAACATGAAGTTCGCGCTCAACG GCGCGCTGACCATCGGCACGCTCGACGGCGCCAATGTCGAGATCAAGGAGTGCGTCGGCGACGACAACATCTTCATCTTC GGCCTGACCACGGCCGAGGTCGCCGAACGGCGCAACAATGGCTACAACCCGCGCGCCGTGATCGAGGGCTCGCCCGAACT GTCGCAGGCGGTCGCGGCCGTTTCCTCGGGCGTCTTTTCGCCAGACGACCCGGACCGTTACCGCGACCTCATCAACGGCC TCTACGACAGCGACTGGTTCATGGTCGCCGCTGATTTCGATGACTACTCCGCCGCCCAGCGTGATGTCGACGCTGTCTGG CGCAACAGCCCGGACTGGTATGCCAGGGCAATCCGCAATGTCGCGCGCGTCGGCTGGTTCTCGTCCGATCGCACCATCCG CCAATACGCGAAAGAAATCTGGAACGTGCCTGCCTGA
Upstream 100 bases:
>100_bases TGCGCTCGCCGCCTGATTGTCAAATTGCCGCAGGGTAAGCTCGCGGGCGTTTCATCTAAATCGATTGAATATATGTTGCG ATGCGGTAACATGGGCTGGG
Downstream 100 bases:
>100_bases TGTGATTGCATGAGGCCACGAACAATGTGGTCCCGGTGACGTGGGTTGAATGCCAACGCGCATCACCTGAAATAGACACC TGGTGCCCTGGGAGGGACAC
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 838; Mature: 838
Protein sequence:
>838_residues MNGESRYDRGNRTRGSMTRAMTSETLPPLLENPDPKTLAREVLVVLKYRVGKDTTVATQYDWLTASIKVVRDRIVDRWMQ ATKEAYDQQEKRVYYLSLEFLIGRLMRDAFSNLGLMDNMREALSSLGVDLDLIAALEPDAALGNGGLGRLAACFMESMAT VDIPAHGYGIRYANGMFRQEIHDGWQVELPETWLDHGNPWEFERRERSFEVGFGGSVESITSKDGRLERHVWKPTEHVLA VAYDTPVVGWRGNRVNTLRLWSGMPVDPILLDKFNAGDHIGALAESNKADALSRVLYPADSHMAGQELRLRQEYFFSTAS LQDIVQRHLSQYGDLKSLPDKAAIHLNDTHPAIAVPELMRLLMDVHGMDFDLAWDITKRTFGYTNHTLLPEALESWPVPL FERLLPRHMQIVYAINAQVLLEARATDQFSGEQISHISLIQENGDRRVRMGNLAFVGSHSINGVSALHTELMKETVFADL HKLYPDRINNKTNGITPRRWLIQCNPGLTSLAREAIGDRFLDDIDAIKGLDSFADDSAFREKFAGVKRQNKARLANLVAD RLGIKVDPSALFDIQVKRIHEYKRQLLNILEAIALYDQIRSHPERDWMPRVKFFGGKAAPSYHNAKLIIKLANDVARVIN RDPAVRGLLKVVFVPNYNVSLAEVMMPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEIKECVGDDNIFIF GLTTAEVAERRNNGYNPRAVIEGSPELSQAVAAVSSGVFSPDDPDRYRDLINGLYDSDWFMVAADFDDYSAAQRDVDAVW RNSPDWYARAIRNVARVGWFSSDRTIRQYAKEIWNVPA
Sequences:
>Translated_838_residues MNGESRYDRGNRTRGSMTRAMTSETLPPLLENPDPKTLAREVLVVLKYRVGKDTTVATQYDWLTASIKVVRDRIVDRWMQ ATKEAYDQQEKRVYYLSLEFLIGRLMRDAFSNLGLMDNMREALSSLGVDLDLIAALEPDAALGNGGLGRLAACFMESMAT VDIPAHGYGIRYANGMFRQEIHDGWQVELPETWLDHGNPWEFERRERSFEVGFGGSVESITSKDGRLERHVWKPTEHVLA VAYDTPVVGWRGNRVNTLRLWSGMPVDPILLDKFNAGDHIGALAESNKADALSRVLYPADSHMAGQELRLRQEYFFSTAS LQDIVQRHLSQYGDLKSLPDKAAIHLNDTHPAIAVPELMRLLMDVHGMDFDLAWDITKRTFGYTNHTLLPEALESWPVPL FERLLPRHMQIVYAINAQVLLEARATDQFSGEQISHISLIQENGDRRVRMGNLAFVGSHSINGVSALHTELMKETVFADL HKLYPDRINNKTNGITPRRWLIQCNPGLTSLAREAIGDRFLDDIDAIKGLDSFADDSAFREKFAGVKRQNKARLANLVAD RLGIKVDPSALFDIQVKRIHEYKRQLLNILEAIALYDQIRSHPERDWMPRVKFFGGKAAPSYHNAKLIIKLANDVARVIN RDPAVRGLLKVVFVPNYNVSLAEVMMPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEIKECVGDDNIFIF GLTTAEVAERRNNGYNPRAVIEGSPELSQAVAAVSSGVFSPDDPDRYRDLINGLYDSDWFMVAADFDDYSAAQRDVDAVW RNSPDWYARAIRNVARVGWFSSDRTIRQYAKEIWNVPA >Mature_838_residues MNGESRYDRGNRTRGSMTRAMTSETLPPLLENPDPKTLAREVLVVLKYRVGKDTTVATQYDWLTASIKVVRDRIVDRWMQ ATKEAYDQQEKRVYYLSLEFLIGRLMRDAFSNLGLMDNMREALSSLGVDLDLIAALEPDAALGNGGLGRLAACFMESMAT VDIPAHGYGIRYANGMFRQEIHDGWQVELPETWLDHGNPWEFERRERSFEVGFGGSVESITSKDGRLERHVWKPTEHVLA VAYDTPVVGWRGNRVNTLRLWSGMPVDPILLDKFNAGDHIGALAESNKADALSRVLYPADSHMAGQELRLRQEYFFSTAS LQDIVQRHLSQYGDLKSLPDKAAIHLNDTHPAIAVPELMRLLMDVHGMDFDLAWDITKRTFGYTNHTLLPEALESWPVPL FERLLPRHMQIVYAINAQVLLEARATDQFSGEQISHISLIQENGDRRVRMGNLAFVGSHSINGVSALHTELMKETVFADL HKLYPDRINNKTNGITPRRWLIQCNPGLTSLAREAIGDRFLDDIDAIKGLDSFADDSAFREKFAGVKRQNKARLANLVAD RLGIKVDPSALFDIQVKRIHEYKRQLLNILEAIALYDQIRSHPERDWMPRVKFFGGKAAPSYHNAKLIIKLANDVARVIN RDPAVRGLLKVVFVPNYNVSLAEVMMPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEIKECVGDDNIFIF GLTTAEVAERRNNGYNPRAVIEGSPELSQAVAAVSSGVFSPDDPDRYRDLINGLYDSDWFMVAADFDDYSAAQRDVDAVW RNSPDWYARAIRNVARVGWFSSDRTIRQYAKEIWNVPA
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=801, Percent_Identity=50.187265917603, Blast_Score=786, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=799, Percent_Identity=50.1877346683354, Blast_Score=781, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=799, Percent_Identity=48.936170212766, Blast_Score=771, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=799, Percent_Identity=46.8085106382979, Blast_Score=721, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=50.5988023952096, Blast_Score=682, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=802, Percent_Identity=48.6284289276808, Blast_Score=785, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=747, Percent_Identity=47.3895582329317, Blast_Score=682, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=804, Percent_Identity=49.3781094527363, Blast_Score=785, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=804, Percent_Identity=49.3781094527363, Blast_Score=785, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=803, Percent_Identity=45.0809464508095, Blast_Score=661, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=800, Percent_Identity=48.5, Blast_Score=761, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=800, Percent_Identity=48.5, Blast_Score=761, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94212; Mature: 94212
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGESRYDRGNRTRGSMTRAMTSETLPPLLENPDPKTLAREVLVVLKYRVGKDTTVATQY CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC DWLTASIKVVRDRIVDRWMQATKEAYDQQEKRVYYLSLEFLIGRLMRDAFSNLGLMDNMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCHHHHHH EALSSLGVDLDLIAALEPDAALGNGGLGRLAACFMESMATVDIPAHGYGIRYANGMFRQE HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEECCCCCCCCHHCCCHHHHH IHDGWQVELPETWLDHGNPWEFERRERSFEVGFGGSVESITSKDGRLERHVWKPTEHVLA HCCCCEEECCHHHHCCCCCCCHHHHCCCEECCCCCCHHHHHCCCCCHHHHCCCCCHHEEE VAYDTPVVGWRGNRVNTLRLWSGMPVDPILLDKFNAGDHIGALAESNKADALSRVLYPAD EEECCCEECCCCCCEEEEEECCCCCCCHHEEECCCCCCCHHHHHCCCHHHHHHHHHCCCC SHMAGQELRLRQEYFFSTASLQDIVQRHLSQYGDLKSLPDKAAIHLNDTHPAIAVPELMR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCCCCCEEHHHHHH LLMDVHGMDFDLAWDITKRTFGYTNHTLLPEALESWPVPLFERLLPRHMQIVYAINAQVL HHHHHCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHEEEEEEECCEEE LEARATDQFSGEQISHISLIQENGDRRVRMGNLAFVGSHSINGVSALHTELMKETVFADL EEECCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHH HKLYPDRINNKTNGITPRRWLIQCNPGLTSLAREAIGDRFLDDIDAIKGLDSFADDSAFR HHHCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHH EKFAGVKRQNKARLANLVADRLGIKVDPSALFDIQVKRIHEYKRQLLNILEAIALYDQIR HHHHCCCHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHPERDWMPRVKFFGGKAAPSYHNAKLIIKLANDVARVINRDPAVRGLLKVVFVPNYNVS CCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHEEEECCCCCH LAEVMMPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEIKECVGDDNIFIF HHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCEEHHHHCCCCCEEEE GLTTAEVAERRNNGYNPRAVIEGSPELSQAVAAVSSGVFSPDDPDRYRDLINGLYDSDWF ECCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE MVAADFDDYSAAQRDVDAVWRNSPDWYARAIRNVARVGWFSSDRTIRQYAKEIWNVPA EEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNGESRYDRGNRTRGSMTRAMTSETLPPLLENPDPKTLAREVLVVLKYRVGKDTTVATQY CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC DWLTASIKVVRDRIVDRWMQATKEAYDQQEKRVYYLSLEFLIGRLMRDAFSNLGLMDNMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCHHHHHH EALSSLGVDLDLIAALEPDAALGNGGLGRLAACFMESMATVDIPAHGYGIRYANGMFRQE HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEECCCCCCCCHHCCCHHHHH IHDGWQVELPETWLDHGNPWEFERRERSFEVGFGGSVESITSKDGRLERHVWKPTEHVLA HCCCCEEECCHHHHCCCCCCCHHHHCCCEECCCCCCHHHHHCCCCCHHHHCCCCCHHEEE VAYDTPVVGWRGNRVNTLRLWSGMPVDPILLDKFNAGDHIGALAESNKADALSRVLYPAD EEECCCEECCCCCCEEEEEECCCCCCCHHEEECCCCCCCHHHHHCCCHHHHHHHHHCCCC SHMAGQELRLRQEYFFSTASLQDIVQRHLSQYGDLKSLPDKAAIHLNDTHPAIAVPELMR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCCCCCEEHHHHHH LLMDVHGMDFDLAWDITKRTFGYTNHTLLPEALESWPVPLFERLLPRHMQIVYAINAQVL HHHHHCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHEEEEEEECCEEE LEARATDQFSGEQISHISLIQENGDRRVRMGNLAFVGSHSINGVSALHTELMKETVFADL EEECCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHH HKLYPDRINNKTNGITPRRWLIQCNPGLTSLAREAIGDRFLDDIDAIKGLDSFADDSAFR HHHCHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHH EKFAGVKRQNKARLANLVADRLGIKVDPSALFDIQVKRIHEYKRQLLNILEAIALYDQIR HHHHCCCHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHPERDWMPRVKFFGGKAAPSYHNAKLIIKLANDVARVINRDPAVRGLLKVVFVPNYNVS CCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHEEEECCCCCH LAEVMMPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEIKECVGDDNIFIF HHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCEEHHHHCCCCCEEEE GLTTAEVAERRNNGYNPRAVIEGSPELSQAVAAVSSGVFSPDDPDRYRDLINGLYDSDWF ECCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE MVAADFDDYSAAQRDVDAVWRNSPDWYARAIRNVARVGWFSSDRTIRQYAKEIWNVPA EEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]