| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is noeK [H]
Identifier: 13476287
GI number: 13476287
Start: 6252229
End: 6253680
Strand: Reverse
Name: noeK [H]
Synonym: mll7567
Alternate gene names: 13476287
Gene position: 6253680-6252229 (Counterclockwise)
Preceding gene: 13476290
Following gene: 13476285
Centisome position: 88.88
GC content: 60.88
Gene sequence:
>1452_bases ATGGCGGCCTTGCCTCTCATCAGCCAAAGTGAAGTGATGAAATTTGGATCGAGTGGCCTTAGAGGCCTGGCTTCGGAACT GGTCGGCAACCCGAGTGGACTTTATACTGAGGCTTTCGCCTGGCGCCTGACTGCCGGCGGGATTCAGCCGAACTCCATGG TGCTGGTGGGTCGTGACTTGCGCGACAGCAGTCCCGCCATTGCCGCCAACTGCATGGCAGCCCTGGCGGCAAGCGGGCTT CAACCGATCGATTGCGGAGCCATTCCAACGCCGGCTTTGGCGCTGTACGGCCAGCAGCAAGGCGCAGCGGCCCTTATGGT GACGGGTTCGCATATTCCCGCTGATCGCAACGGTATCAAATTTTACAGCCCGCACGGCGAGATCAGCAAGGCGGATGAAG CCGCCATGGCACGATACGCCGCCGAGAGATCGGGCGCCTATCGCCCTCCGCCGCCGCCAGGAACGGCTCCACCAACACGC CATGATCAAGCGATCGCCGCCTATCGCACGCGCGCCGAGATCATATTGGAGCCCGGCTCCCTTTCCGGCATGAGGGTCGG CGTTTATCAGCACAGCTCGGTGGCGGCGGATCTGCTGGTCGAGATTCTCCAATCCCTTGGCGCTAATGTGACGCCTGTCG GGAAATCCGGTACCTTCGTGCCCGTTGATACTGAAGCTGTCAGCCCGACCACACTAGCAAACTTCAAGCGTTGGGCTCGG GAATTCAACCTCGATGCCATCGTGTCGACAGATGCCGATGCCGATCGGCCGCTCATTGCCGACGAGAATGGCGATCTTTT TCGCGGCGACCTGATCGGTCTCGCCACGGCCTTGTTCTTGCGGGCAGACGTCGTCGTGACGCCGGTGACCTCCAATTCGG GCATTTCGAAAGCCTTCGGTTTCAAGGTCGTGAGGACGAAGGTCGGATCTCCCTTTGTTATCGAAGGGATGGAAGCATCA CACCAGGCCGGCCGCATCGTCGTCGGCTTCGAGGCCAATGGCGGCGTTCTCCTGGGATCGGATTGTTCCCTGCGCGGAAT GACACTGACGGCATTGCCGACACGGGATTCCCTGCTCCCGATCCTCGCCGTGCTGGGTCTGGTTGCATCGACAGGAAATA CGCTGTCGCAGCTGCGCACGGTCTGGAAGCTTCCGGTTTGCGCAAGCGAGCGACTTGAAAACTTCCCGGTGGAAAGCTCG CACAGCTTGATGCGCCGCCTGGCGGATCGGGATGCACTGCAGCAATTCCTGGCGCCTTTCGGGACCGTTGCCGAAGTCGA CGAGACCGACGGCTTCAGGATGCGAATGCAGACCGGTGAGATCATCCATTTGCGGCCCTCCGGCAACGCACCTGAACTTC GCTGCTATTCGGAGGCTGCTACCCCTGACAGAGCTGCAGCGATCGTGGCATTGACGCTTGAAAGGGCGCGGGCGATCACC TCCACGGACTAA
Upstream 100 bases:
>100_bases GTTGCCGTTTCGTCCATCGACGCACTATTTTTCAAACTCTCGAGGAAAACCCCGGGTGGGCGGCAAAGCGCTTTTCGGTT AACAGGAGACCTACCGCAAC
Downstream 100 bases:
>100_bases ACAGCGGCCGTCTTACGGAAAGTGGTTCTCGCACTGGCCAATGGAGCACGAGGTCACCGCTAGACCACGCGCCTTGAAGC GATTCGATTTCAGATGCGAC
Product: nodulation protein noeK, phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MAALPLISQSEVMKFGSSGLRGLASELVGNPSGLYTEAFAWRLTAGGIQPNSMVLVGRDLRDSSPAIAANCMAALAASGL QPIDCGAIPTPALALYGQQQGAAALMVTGSHIPADRNGIKFYSPHGEISKADEAAMARYAAERSGAYRPPPPPGTAPPTR HDQAIAAYRTRAEIILEPGSLSGMRVGVYQHSSVAADLLVEILQSLGANVTPVGKSGTFVPVDTEAVSPTTLANFKRWAR EFNLDAIVSTDADADRPLIADENGDLFRGDLIGLATALFLRADVVVTPVTSNSGISKAFGFKVVRTKVGSPFVIEGMEAS HQAGRIVVGFEANGGVLLGSDCSLRGMTLTALPTRDSLLPILAVLGLVASTGNTLSQLRTVWKLPVCASERLENFPVESS HSLMRRLADRDALQQFLAPFGTVAEVDETDGFRMRMQTGEIIHLRPSGNAPELRCYSEAATPDRAAAIVALTLERARAIT STD
Sequences:
>Translated_483_residues MAALPLISQSEVMKFGSSGLRGLASELVGNPSGLYTEAFAWRLTAGGIQPNSMVLVGRDLRDSSPAIAANCMAALAASGL QPIDCGAIPTPALALYGQQQGAAALMVTGSHIPADRNGIKFYSPHGEISKADEAAMARYAAERSGAYRPPPPPGTAPPTR HDQAIAAYRTRAEIILEPGSLSGMRVGVYQHSSVAADLLVEILQSLGANVTPVGKSGTFVPVDTEAVSPTTLANFKRWAR EFNLDAIVSTDADADRPLIADENGDLFRGDLIGLATALFLRADVVVTPVTSNSGISKAFGFKVVRTKVGSPFVIEGMEAS HQAGRIVVGFEANGGVLLGSDCSLRGMTLTALPTRDSLLPILAVLGLVASTGNTLSQLRTVWKLPVCASERLENFPVESS HSLMRRLADRDALQQFLAPFGTVAEVDETDGFRMRMQTGEIIHLRPSGNAPELRCYSEAATPDRAAAIVALTLERARAIT STD >Mature_482_residues AALPLISQSEVMKFGSSGLRGLASELVGNPSGLYTEAFAWRLTAGGIQPNSMVLVGRDLRDSSPAIAANCMAALAASGLQ PIDCGAIPTPALALYGQQQGAAALMVTGSHIPADRNGIKFYSPHGEISKADEAAMARYAAERSGAYRPPPPPGTAPPTRH DQAIAAYRTRAEIILEPGSLSGMRVGVYQHSSVAADLLVEILQSLGANVTPVGKSGTFVPVDTEAVSPTTLANFKRWARE FNLDAIVSTDADADRPLIADENGDLFRGDLIGLATALFLRADVVVTPVTSNSGISKAFGFKVVRTKVGSPFVIEGMEASH QAGRIVVGFEANGGVLLGSDCSLRGMTLTALPTRDSLLPILAVLGLVASTGNTLSQLRTVWKLPVCASERLENFPVESSH SLMRRLADRDALQQFLAPFGTVAEVDETDGFRMRMQTGEIIHLRPSGNAPELRCYSEAATPDRAAAIVALTLERARAITS TD
Specific function: Unknown
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=384, Percent_Identity=26.5625, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 50892; Mature: 50760
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPLISQSEVMKFGSSGLRGLASELVGNPSGLYTEAFAWRLTAGGIQPNSMVLVGRDL CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCEEEEECCC RDSSPAIAANCMAALAASGLQPIDCGAIPTPALALYGQQQGAAALMVTGSHIPADRNGIK CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCCEEEEEECCCCCCCCCCCE FYSPHGEISKADEAAMARYAAERSGAYRPPPPPGTAPPTRHDQAIAAYRTRAEIILEPGS EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCC LSGMRVGVYQHSSVAADLLVEILQSLGANVTPVGKSGTFVPVDTEAVSPTTLANFKRWAR CCCEEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHH EFNLDAIVSTDADADRPLIADENGDLFRGDLIGLATALFLRADVVVTPVTSNSGISKAFG HCCCCEEEECCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHC FKVVRTKVGSPFVIEGMEASHQAGRIVVGFEANGGVLLGSDCSLRGMTLTALPTRDSLLP EEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCEEEEECCCCCHHHH ILAVLGLVASTGNTLSQLRTVWKLPVCASERLENFPVESSHSLMRRLADRDALQQFLAPF HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC GTVAEVDETDGFRMRMQTGEIIHLRPSGNAPELRCYSEAATPDRAAAIVALTLERARAIT CCEEECCCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCHHHEEEEEEHHHHHHHC STD CCC >Mature Secondary Structure AALPLISQSEVMKFGSSGLRGLASELVGNPSGLYTEAFAWRLTAGGIQPNSMVLVGRDL CCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCEEEEECCC RDSSPAIAANCMAALAASGLQPIDCGAIPTPALALYGQQQGAAALMVTGSHIPADRNGIK CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCCEEEEEECCCCCCCCCCCE FYSPHGEISKADEAAMARYAAERSGAYRPPPPPGTAPPTRHDQAIAAYRTRAEIILEPGS EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCC LSGMRVGVYQHSSVAADLLVEILQSLGANVTPVGKSGTFVPVDTEAVSPTTLANFKRWAR CCCEEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHH EFNLDAIVSTDADADRPLIADENGDLFRGDLIGLATALFLRADVVVTPVTSNSGISKAFG HCCCCEEEECCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHC FKVVRTKVGSPFVIEGMEASHQAGRIVVGFEANGGVLLGSDCSLRGMTLTALPTRDSLLP EEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCEEEEECCCCCHHHH ILAVLGLVASTGNTLSQLRTVWKLPVCASERLENFPVESSHSLMRRLADRDALQQFLAPF HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC GTVAEVDETDGFRMRMQTGEIIHLRPSGNAPELRCYSEAATPDRAAAIVALTLERARAIT CCEEECCCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCHHHEEEEEEHHHHHHHC STD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]