Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is yihX [H]

Identifier: 13476249

GI number: 13476249

Start: 6207576

End: 6208214

Strand: Reverse

Name: yihX [H]

Synonym: mll7522

Alternate gene names: 13476249

Gene position: 6208214-6207576 (Counterclockwise)

Preceding gene: 13476250

Following gene: 13476247

Centisome position: 88.23

GC content: 59.0

Gene sequence:

>639_bases
ATGACCGAGATCCGCCACATCGTTTTCGACATCGGCCGCGTGCTGATCCACTACGATCCCAATATTCCGTTCAGCCGCCT
CATCCCCGATGCCGAAGAGAGAAAGTGGTTCTTCGACAATGTCTGCACGCATGACTGGAACATCGAGCAGGATCGCGGCC
GGAGCTGGGAAGAGGCAGAGGCGCTGCTGATTGCGGACCATCCCGACCATGCGGAAAACATCCGCAATTTCCGCCGTCAC
TGGCACGACATGGTGCCGCATGCCTATGACGACAGCGTCGCCATCATGCTTGGCCTGATCGAAAGCGGCCACGACGTGAC
GATGTTGACCAACTTCGCGTCCGACACTCTGGCGGAAGCCCGCAAACGCTTCGATTTCCTAAATCGGCCACGCGGTGTGA
CCATCTCCGGCGAGATCGGCAAGATCAAGCCGGATCGTGACATTTACGATCATCACGTGGCTGCGTTCGGGCTCGAACCC
TCGGCGACGCTGTTCATCGACGACAGCCAGAAGAATGTCGACGGCGCCAAGGCCGCGGGCTGGCAAGCCGTGCTGTTCAC
TGATGCCAGGACGCTTCAAGCCGATCTTGAACGCTTGGGAATCAAGTCGCGATCTGAATCGCTTGCGGCGATCCGCTGA

Upstream 100 bases:

>100_bases
CGAGATTTCCGGAGAGGCCCTGCCCACTGTCATGAAAAAGGCAATCGAGGCTGCGATACCCGGCGCGACGAAAAAGCAAC
GCCCGCATTGAAGAGGCTTC

Downstream 100 bases:

>100_bases
GATTTTGATTCAACGCAATACGCGATAATTCAGCGGGGGGGTCAGCCCCCTGCCCGCTCCATGCCGAGACGGGCGATGCG
GCGCAGTTCGTCGATCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTEIRHIVFDIGRVLIHYDPNIPFSRLIPDAEERKWFFDNVCTHDWNIEQDRGRSWEEAEALLIADHPDHAENIRNFRRH
WHDMVPHAYDDSVAIMLGLIESGHDVTMLTNFASDTLAEARKRFDFLNRPRGVTISGEIGKIKPDRDIYDHHVAAFGLEP
SATLFIDDSQKNVDGAKAAGWQAVLFTDARTLQADLERLGIKSRSESLAAIR

Sequences:

>Translated_212_residues
MTEIRHIVFDIGRVLIHYDPNIPFSRLIPDAEERKWFFDNVCTHDWNIEQDRGRSWEEAEALLIADHPDHAENIRNFRRH
WHDMVPHAYDDSVAIMLGLIESGHDVTMLTNFASDTLAEARKRFDFLNRPRGVTISGEIGKIKPDRDIYDHHVAAFGLEP
SATLFIDDSQKNVDGAKAAGWQAVLFTDARTLQADLERLGIKSRSESLAAIR
>Mature_211_residues
TEIRHIVFDIGRVLIHYDPNIPFSRLIPDAEERKWFFDNVCTHDWNIEQDRGRSWEEAEALLIADHPDHAENIRNFRRHW
HDMVPHAYDDSVAIMLGLIESGHDVTMLTNFASDTLAEARKRFDFLNRPRGVTISGEIGKIKPDRDIYDHHVAAFGLEPS
ATLFIDDSQKNVDGAKAAGWQAVLFTDARTLQADLERLGIKSRSESLAAIR

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]

Homologues:

Organism=Escherichia coli, GI87082345, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24271; Mature: 24140

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIRHIVFDIGRVLIHYDPNIPFSRLIPDAEERKWFFDNVCTHDWNIEQDRGRSWEEAE
CCHHHHHHHHHHHEEEEECCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
ALLIADHPDHAENIRNFRRHWHDMVPHAYDDSVAIMLGLIESGHDVTMLTNFASDTLAEA
EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCEEEEEHHHHHHHHHH
RKRFDFLNRPRGVTISGEIGKIKPDRDIYDHHVAAFGLEPSATLFIDDSQKNVDGAKAAG
HHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCC
WQAVLFTDARTLQADLERLGIKSRSESLAAIR
CEEEEEECHHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure 
TEIRHIVFDIGRVLIHYDPNIPFSRLIPDAEERKWFFDNVCTHDWNIEQDRGRSWEEAE
CHHHHHHHHHHHEEEEECCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
ALLIADHPDHAENIRNFRRHWHDMVPHAYDDSVAIMLGLIESGHDVTMLTNFASDTLAEA
EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCEEEEEHHHHHHHHHH
RKRFDFLNRPRGVTISGEIGKIKPDRDIYDHHVAAFGLEPSATLFIDDSQKNVDGAKAAG
HHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCC
WQAVLFTDARTLQADLERLGIKSRSESLAAIR
CEEEEEECHHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]