| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476246
Identifier: 13476246
GI number: 13476246
Start: 6204605
End: 6205492
Strand: Direct
Name: 13476246
Synonym: mlr7518
Alternate gene names: NA
Gene position: 6204605-6205492 (Clockwise)
Preceding gene: 161621445
Following gene: 13476248
Centisome position: 88.18
GC content: 61.37
Gene sequence:
>888_bases GTGCTTCCCCGCGCGTACTCACATATTGCATGTCTCAGTCCCGTTGCCGCTTGGCTTTCCGTTCACCACAAGGTGGTTAA TTTCTGTGCCGGCTCCAGTCGCATTTTTGCCGCGGCGTTGATATACGTCACCAGCTTTACGAGAGGGAAGTGCAGTTTCA TGGCGTTTCGTACACTCAGTGGCCGCTTTTTGGCGGGTCTTGCGCTCACCGGCTTTATGCTCGCCGCCGCCGGCTGCCAA TCGGGCGACAATGGCATCCTTAACCTCGGTTTTGGCAAGAAGGACCCGACGGCACCTCCACCGCCGCAGGATCCCAAGAT TCTCGCCAGCCAGCTGAATGCCTATTGCCCGCGGGTGACCGTGCGCGACGGCACGGCCTTTTTCAACACCTATGCCAACG AGGTCAAGAAGGCCAAGCCGAAGCTCAAGAAGACCGGCGACGCCGCCGCGGATGCCGCGGCCCAGGCCGCGGCTGACGCC GCCGCTGCCACGCCGCCCGACGATTCCGCGAGGATCATTTACCAGGCGTCGATTGCCGACGTGACCCGAGACTGCAGCCG CGCCGACGGACAGCTGGCGATGAAGATCGCGGTTGCCGGCAAGATCGTGCCGGGACCGAAGTTTACGCCCGGCACCATCA CCATGCCGATCCGCACAGCGGTGATGCACGGTACCGACGTGCTTTACTCGCAAATTCACCAATATCAGGTCCAGGTCACC GATCCCTCGGTCGCCACCCAGTTCGTCTTCACCGATTCCAATGTCGTCGTGCCGGCGCCGACGGCGCAGGATTATCAGGT CTATGCCGGCTATGACGAAACCGCGCCGAAGGCGACGACCGACAAGCCGAAGAAGACTCATAGGAAGAAGGCCGCCACGA CGAACTAA
Upstream 100 bases:
>100_bases CGGATCTCGGAAGCTGAAAACTGCGGCCACTCGCGCGGCACGTAAAGCCCACCATCGCGCGCCAGCCCAGCCAGCACGGC ATCGGAAAATCCAAGCGCGG
Downstream 100 bases:
>100_bases GCGTCCATGGACGTAGCGTGTGCCCAGCCGGGCACACGGTGCTCAGGCGTCGGCCGACCATTCCGACAGCGCCGCGATCA CGCTTTTCAGCTCTGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MLPRAYSHIACLSPVAAWLSVHHKVVNFCAGSSRIFAAALIYVTSFTRGKCSFMAFRTLSGRFLAGLALTGFMLAAAGCQ SGDNGILNLGFGKKDPTAPPPPQDPKILASQLNAYCPRVTVRDGTAFFNTYANEVKKAKPKLKKTGDAAADAAAQAAADA AAATPPDDSARIIYQASIADVTRDCSRADGQLAMKIAVAGKIVPGPKFTPGTITMPIRTAVMHGTDVLYSQIHQYQVQVT DPSVATQFVFTDSNVVVPAPTAQDYQVYAGYDETAPKATTDKPKKTHRKKAATTN
Sequences:
>Translated_295_residues MLPRAYSHIACLSPVAAWLSVHHKVVNFCAGSSRIFAAALIYVTSFTRGKCSFMAFRTLSGRFLAGLALTGFMLAAAGCQ SGDNGILNLGFGKKDPTAPPPPQDPKILASQLNAYCPRVTVRDGTAFFNTYANEVKKAKPKLKKTGDAAADAAAQAAADA AAATPPDDSARIIYQASIADVTRDCSRADGQLAMKIAVAGKIVPGPKFTPGTITMPIRTAVMHGTDVLYSQIHQYQVQVT DPSVATQFVFTDSNVVVPAPTAQDYQVYAGYDETAPKATTDKPKKTHRKKAATTN >Mature_295_residues MLPRAYSHIACLSPVAAWLSVHHKVVNFCAGSSRIFAAALIYVTSFTRGKCSFMAFRTLSGRFLAGLALTGFMLAAAGCQ SGDNGILNLGFGKKDPTAPPPPQDPKILASQLNAYCPRVTVRDGTAFFNTYANEVKKAKPKLKKTGDAAADAAAQAAADA AAATPPDDSARIIYQASIADVTRDCSRADGQLAMKIAVAGKIVPGPKFTPGTITMPIRTAVMHGTDVLYSQIHQYQVQVT DPSVATQFVFTDSNVVVPAPTAQDYQVYAGYDETAPKATTDKPKKTHRKKAATTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31259; Mature: 31259
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRAYSHIACLSPVAAWLSVHHKVVNFCAGSSRIFAAALIYVTSFTRGKCSFMAFRTLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHC GRFLAGLALTGFMLAAAGCQSGDNGILNLGFGKKDPTAPPPPQDPKILASQLNAYCPRVT CHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEE VRDGTAFFNTYANEVKKAKPKLKKTGDAAADAAAQAAADAAAATPPDDSARIIYQASIAD EECCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHH VTRDCSRADGQLAMKIAVAGKIVPGPKFTPGTITMPIRTAVMHGTDVLYSQIHQYQVQVT HHHHHHCCCCCEEEEEEEECEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEE DPSVATQFVFTDSNVVVPAPTAQDYQVYAGYDETAPKATTDKPKKTHRKKAATTN CCCCEEEEEEECCCEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MLPRAYSHIACLSPVAAWLSVHHKVVNFCAGSSRIFAAALIYVTSFTRGKCSFMAFRTLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHC GRFLAGLALTGFMLAAAGCQSGDNGILNLGFGKKDPTAPPPPQDPKILASQLNAYCPRVT CHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEE VRDGTAFFNTYANEVKKAKPKLKKTGDAAADAAAQAAADAAAATPPDDSARIIYQASIAD EECCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHH VTRDCSRADGQLAMKIAVAGKIVPGPKFTPGTITMPIRTAVMHGTDVLYSQIHQYQVQVT HHHHHHCCCCCEEEEEEEECEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEE DPSVATQFVFTDSNVVVPAPTAQDYQVYAGYDETAPKATTDKPKKTHRKKAATTN CCCCEEEEEEECCCEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA