Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13476238

Identifier: 13476238

GI number: 13476238

Start: 6195679

End: 6196182

Strand: Reverse

Name: 13476238

Synonym: mll7507

Alternate gene names: NA

Gene position: 6196182-6195679 (Counterclockwise)

Preceding gene: 13476239

Following gene: 13476224

Centisome position: 88.06

GC content: 65.08

Gene sequence:

>504_bases
ATGCCCGCTTTCGGGGGGATTCCAACGATGTTTGACGTCTTCTGGCGCGCTGTCGCGATCGGCATCGGCGCCACGGTACT
GATGGATCTCTGGGCGATCCTGCTTCACAAGGCATTCGGCCAGCCACGGCCGAACTGGGGACCGGTCGGGCGCTGGGTCT
GGCATCTCGGCGACAAGGTGTTTCACGATGATATCGGCGAGGCAGAGCCTTACGCGCATGAAGTGGCGCTGGGCTGGGTG
TTTCACTATTTCGTCGGCATCGTCTACGGCATCATCCTGGTCGTGCTGGCCGGAACCGGCTGGCTGGCCGCACCGACCTT
CCTGCCGGCCTTCATCCTCGGGATCGTAACCGTCGGCGCCGGCTGGTTCCTGCTGGCGCCAGGCATGGGTGCCGGATGGG
CAGCCTCGAAGCGGCCCAATCCCATGCGGATCCGTGCGCTCAACCTGGTCTCCCACACGGTCTTCGCGCTCGGGCTTTGG
GGCACGGCGCTGCTGATCCGCTGA

Upstream 100 bases:

>100_bases
GTCCGGCGCGGCCCATATTCTCGGGCAGCTCTAAGCTTCAACGGTCGCGTCGGACGAGACCGCACGGCCGGCCTCGCCCG
ACGACCGCTTGCGCTTGAGA

Downstream 100 bases:

>100_bases
GGGTCTAGGACTGTTCCGGCCTGTCGATCGGCCGCCATCCATGGACGACGCGGCGCGCACCGATATCGTAGGCAAAAAAA
TTGCCGCCGCCCGCGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPAFGGIPTMFDVFWRAVAIGIGATVLMDLWAILLHKAFGQPRPNWGPVGRWVWHLGDKVFHDDIGEAEPYAHEVALGWV
FHYFVGIVYGIILVVLAGTGWLAAPTFLPAFILGIVTVGAGWFLLAPGMGAGWAASKRPNPMRIRALNLVSHTVFALGLW
GTALLIR

Sequences:

>Translated_167_residues
MPAFGGIPTMFDVFWRAVAIGIGATVLMDLWAILLHKAFGQPRPNWGPVGRWVWHLGDKVFHDDIGEAEPYAHEVALGWV
FHYFVGIVYGIILVVLAGTGWLAAPTFLPAFILGIVTVGAGWFLLAPGMGAGWAASKRPNPMRIRALNLVSHTVFALGLW
GTALLIR
>Mature_166_residues
PAFGGIPTMFDVFWRAVAIGIGATVLMDLWAILLHKAFGQPRPNWGPVGRWVWHLGDKVFHDDIGEAEPYAHEVALGWVF
HYFVGIVYGIILVVLAGTGWLAAPTFLPAFILGIVTVGAGWFLLAPGMGAGWAASKRPNPMRIRALNLVSHTVFALGLWG
TALLIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18171; Mature: 18040

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFGGIPTMFDVFWRAVAIGIGATVLMDLWAILLHKAFGQPRPNWGPVGRWVWHLGDKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHH
FHDDIGEAEPYAHEVALGWVFHYFVGIVYGIILVVLAGTGWLAAPTFLPAFILGIVTVGA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
GWFLLAPGMGAGWAASKRPNPMRIRALNLVSHTVFALGLWGTALLIR
CHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAFGGIPTMFDVFWRAVAIGIGATVLMDLWAILLHKAFGQPRPNWGPVGRWVWHLGDKV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHH
FHDDIGEAEPYAHEVALGWVFHYFVGIVYGIILVVLAGTGWLAAPTFLPAFILGIVTVGA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
GWFLLAPGMGAGWAASKRPNPMRIRALNLVSHTVFALGLWGTALLIR
CHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA