| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476161
Identifier: 13476161
GI number: 13476161
Start: 6124711
End: 6125895
Strand: Direct
Name: 13476161
Synonym: mlr7408
Alternate gene names: NA
Gene position: 6124711-6125895 (Clockwise)
Preceding gene: 13476160
Following gene: 13476162
Centisome position: 87.05
GC content: 62.36
Gene sequence:
>1185_bases GTGCATCGACGCGTCTTGAAGCGGCTTGTTGCCGCCGCCGGTGAGAAGAAACGCAATTTTGTGTCTCCTTTCATCATCGG CCTCGGCATCTGGATCGGCTTCCCGACCGTCGCCGCCTATCAGGACATGACCAGCCTCGTTTCAGGTCTCGAATCGCCGA CCGCGCGCTGGAATTCCTATGTCGAAAGATCCGTCGCCGGTTCGACCCATGCCGCCGAGATGCCCTTCGTCGATTCCGAC GTCACCGGCTCGATCTCCGGATCGGGCATTCACCTGGCTGGCGTCGGCAACGTGTCGTTTCGCGGCAAGGGCGGCAAGGT CAGCGGCTCCCCGGACGAGGATCGCGTGGTGCGCGCCGACAAGAAGGGCCGCATCGTCCAGGTGTCTCCCGTTGCGCCGC CGAAAAACTTCAACGCCGGTTCGATCTTCCAGCGGACCTCCTCCCTGATGCGGCCGAGCATGGACGGCGGCCTGAAGATG GCTTTCGCCAAGCCTCAGATCAAAGGCAAGGAAATCCAGATCGCCGCGGAATTCCATGCGCGTGAGGACAAGAAGCCGGA TCCCGGCGTGCCGGCCATGCTTGCCGCCCTGGTCAACAACGATCATCCCGATGTTCTGGCGACGGCCTATGCGCAATCCG AGCCCGACTATGCCAAGGCCTCGCCCTTCGAAGCCCTGCTTCAGGATGAGCAGCCTAACAGCGGCCGCTTCATTCCGCCG ATGGCCAAGGGCGACCATTCGTGGATCCAGAACCCGCTTCCGGCCAGCGTCTTCTCCAAGAAGGAACAGGCATGCCTGGC CAATGGCATCTATTTCGAGGCCAGGAGCGAATCCGTTCGCGGCCAGGCCGCCGTTGCCCAGGTCATCCTCAACCGCGTCC GCAACCCCGCCTATCCCAATTCGATCTGCGGCGTCGTCTACCAGAACGACAGCTGGTTCAACCGCTGCCAGTTCTCCTTC GCCTGCGACGGCCGGAAGAAGCGCATCGAAAGCCCGGCCGCCTACAAGACCGCGCAGGACATCGCCATGGCCGTCACCGC CGGCAAGATATTCATTCCCGAGGTCGGATCGTCGACCCACTACTATGCCCAATATGTCCATCCGGGCTGGGCGCGCACCA TGCAGAAGATGACCAAGATCGGCCTGCATATCTTCTACCGCACCTATGGCGGCGGCTGGAGCTGA
Upstream 100 bases:
>100_bases GCCGACTGAGAAAACCCGACCGATCCCGTTAACGTCCCATCAAGGTTAATGCATCATTTTGCTCTCCAGTGGGGTCAGTA GCGTTCCTGGAGAGAGTTCC
Downstream 100 bases:
>100_bases AGGCTCGCCAGCCGATGGTCTTTTCCATCGGCCACAGGCTCGATCAGGCAGCCATTGCCGGGAGGATTCGCGCAGCACGC CCCCATCATCGCGACGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSYVERSVAGSTHAAEMPFVDSD VTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRADKKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKM AFAKPQIKGKEIQIAAEFHAREDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPNSICGVVYQNDSWFNRCQFSF ACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTHYYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS
Sequences:
>Translated_394_residues MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSYVERSVAGSTHAAEMPFVDSD VTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRADKKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKM AFAKPQIKGKEIQIAAEFHAREDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPNSICGVVYQNDSWFNRCQFSF ACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTHYYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS >Mature_394_residues MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSYVERSVAGSTHAAEMPFVDSD VTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRADKKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKM AFAKPQIKGKEIQIAAEFHAREDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPNSICGVVYQNDSWFNRCQFSF ACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTHYYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42902; Mature: 42902
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSY CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH VERSVAGSTHAAEMPFVDSDVTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRAD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEC KKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKMAFAKPQIKGKEIQIAAEFHA CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC REDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP CCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCC MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPN CCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC SICGVVYQNDSWFNRCQFSFACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTH CEEEEEECCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHHHHHHEECCEEEEECCCCCCE YYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS EEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSY CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH VERSVAGSTHAAEMPFVDSDVTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRAD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEC KKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKMAFAKPQIKGKEIQIAAEFHA CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC REDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP CCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCC MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPN CCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC SICGVVYQNDSWFNRCQFSFACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTH CEEEEEECCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHHHHHHEECCEEEEECCCCCCE YYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS EEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA