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The map label for this gene is rbsB [C]

Identifier: 13476072

GI number: 13476072

Start: 6024513

End: 6025535

Strand: Direct

Name: rbsB [C]

Synonym: mlr7288

Alternate gene names: 13476072

Gene position: 6024513-6025535 (Clockwise)

Preceding gene: 13476071

Following gene: 13476075

Centisome position: 85.62

GC content: 64.52

Gene sequence:

>1023_bases
GTGGCGCTCGGGCTGGCCGGCGCAACCATGCTGATGCAGGTCCCGGCTTTCGCCGCGGACAAGCCGGCCCCGTTCGATAA
GCCCGGCGTCAAGATCGCGCTGGTGCGCTATCTCTCGACCGGCGACTTCTTCCAGGCCTACCTCTCGGGCGTCGAGGCGC
AGTCCAAGGCGCTTGGCATCGACCTGCGCGTGCTCGACAGCCGCCAGGATGCCGCCCTTCAGTCCGATATGGTCGACCAG
GCCATCGCGCTCGGCGTGCAGGGCATCATCATCCAGCACGGCCTGACGGAATCGATGAAGGATGCGGCCCAGCGCGCGGT
CGACGCCGGCATCAAGGTTGTGGCCTTCGACGTCAATGTCGAAAACCCCAAGATCCCGCAGATCGAGCAGTCGGACAAGG
ACCTTGCCCGCCTCGCGCTCGAGCAGGCGGTGAAGGACAATGGTGACAGCTGGAATGCCGGCTATGTCTACGTCGCCGGA
ATCGCGCCGCTCGACCGCCGCAACGAGACCTGGGTCGACGTGAAGAAGAAATATGCGGGCATCAAGGAAGTCGCGATGTT
CGGCACGCTCGACAACCCGATCGCCAACTCCGTCGCCAACCAGGCGCGTTCGGTGCTGTCGGCCCATCCCGACATCAAGG
TGATGTTCGCCCCCTATGACGAATTCGCCAAGGGCGTGAAGATCGCCGTCGACGAGGCCGGCCTGAACAAGGGCATCAAG
ATCTATTCGGCCGACATCTCGACATCGGACATATCGGCGATGCGCGAGCCCGACAGCGCCTGGGCCGCGACCGCGGCGAC
CAACCCGGCCGTCGTCGGCCAGGTCTCGGTGCGCGCTCTGGCGCAACTGCTCGCCGGTGAAGACCCCGGCCACAACGTCA
TCGTGCCGCCGACGCTGATCACCCAGAAGGAGCTGATCGACAAGGACATCAAGAACATGGAAGACCTGTCGGCCAAGCTG
CCGCAGTTCGCCCATGCAAATGTCGCCATGCCGGCCTGGATGCCGAACCCGAACGCGAAGTAA

Upstream 100 bases:

>100_bases
TTCGGGCAGGGGCAGGGGGTAGTCTCGACCGGACAGGATTTTGGGTTCAACAAGAGTGGAGGAAAACAAGGTGAACATCA
CGAGAAGACTTCTGGGGAAG

Downstream 100 bases:

>100_bases
GGTTCATCATCGCGCAAACGAAAAGGGCGGCCTTGAGCCGCCCTTTTTGTTGTCTTCTGGAAAGCCTACCGCAGCGCCGC
CGCGATGTTGCCGCCGTCGA

Product: ABC transporter binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: Transport System Protein; Ribose ABC Transporter; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MALGLAGATMLMQVPAFAADKPAPFDKPGVKIALVRYLSTGDFFQAYLSGVEAQSKALGIDLRVLDSRQDAALQSDMVDQ
AIALGVQGIIIQHGLTESMKDAAQRAVDAGIKVVAFDVNVENPKIPQIEQSDKDLARLALEQAVKDNGDSWNAGYVYVAG
IAPLDRRNETWVDVKKKYAGIKEVAMFGTLDNPIANSVANQARSVLSAHPDIKVMFAPYDEFAKGVKIAVDEAGLNKGIK
IYSADISTSDISAMREPDSAWAATAATNPAVVGQVSVRALAQLLAGEDPGHNVIVPPTLITQKELIDKDIKNMEDLSAKL
PQFAHANVAMPAWMPNPNAK

Sequences:

>Translated_340_residues
MALGLAGATMLMQVPAFAADKPAPFDKPGVKIALVRYLSTGDFFQAYLSGVEAQSKALGIDLRVLDSRQDAALQSDMVDQ
AIALGVQGIIIQHGLTESMKDAAQRAVDAGIKVVAFDVNVENPKIPQIEQSDKDLARLALEQAVKDNGDSWNAGYVYVAG
IAPLDRRNETWVDVKKKYAGIKEVAMFGTLDNPIANSVANQARSVLSAHPDIKVMFAPYDEFAKGVKIAVDEAGLNKGIK
IYSADISTSDISAMREPDSAWAATAATNPAVVGQVSVRALAQLLAGEDPGHNVIVPPTLITQKELIDKDIKNMEDLSAKL
PQFAHANVAMPAWMPNPNAK
>Mature_339_residues
ALGLAGATMLMQVPAFAADKPAPFDKPGVKIALVRYLSTGDFFQAYLSGVEAQSKALGIDLRVLDSRQDAALQSDMVDQA
IALGVQGIIIQHGLTESMKDAAQRAVDAGIKVVAFDVNVENPKIPQIEQSDKDLARLALEQAVKDNGDSWNAGYVYVAGI
APLDRRNETWVDVKKKYAGIKEVAMFGTLDNPIANSVANQARSVLSAHPDIKVMFAPYDEFAKGVKIAVDEAGLNKGIKI
YSADISTSDISAMREPDSAWAATAATNPAVVGQVSVRALAQLLAGEDPGHNVIVPPTLITQKELIDKDIKNMEDLSAKLP
QFAHANVAMPAWMPNPNAK

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36317; Mature: 36186

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGLAGATMLMQVPAFAADKPAPFDKPGVKIALVRYLSTGDFFQAYLSGVEAQSKALGI
CCCCCHHHHHHHHCCHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCHHHHHHCE
DLRVLDSRQDAALQSDMVDQAIALGVQGIIIQHGLTESMKDAAQRAVDAGIKVVAFDVNV
EEEEECCCHHHHHHHHHHHHHHHHCHHHEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEC
ENPKIPQIEQSDKDLARLALEQAVKDNGDSWNAGYVYVAGIAPLDRRNETWVDVKKKYAG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCC
IKEVAMFGTLDNPIANSVANQARSVLSAHPDIKVMFAPYDEFAKGVKIAVDEAGLNKGIK
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCEEEEEECCCCCCCEE
IYSADISTSDISAMREPDSAWAATAATNPAVVGQVSVRALAQLLAGEDPGHNVIVPPTLI
EEECCCCCHHHHHHCCCCCHHEECCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEECCCHH
TQKELIDKDIKNMEDLSAKLPQFAHANVAMPAWMPNPNAK
HHHHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCCCCC
>Mature Secondary Structure 
ALGLAGATMLMQVPAFAADKPAPFDKPGVKIALVRYLSTGDFFQAYLSGVEAQSKALGI
CCCCHHHHHHHHCCHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCHHHHHHCE
DLRVLDSRQDAALQSDMVDQAIALGVQGIIIQHGLTESMKDAAQRAVDAGIKVVAFDVNV
EEEEECCCHHHHHHHHHHHHHHHHCHHHEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEC
ENPKIPQIEQSDKDLARLALEQAVKDNGDSWNAGYVYVAGIAPLDRRNETWVDVKKKYAG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCC
IKEVAMFGTLDNPIANSVANQARSVLSAHPDIKVMFAPYDEFAKGVKIAVDEAGLNKGIK
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCEEEEEECCCCCCCEE
IYSADISTSDISAMREPDSAWAATAATNPAVVGQVSVRALAQLLAGEDPGHNVIVPPTLI
EEECCCCCHHHHHHCCCCCHHEECCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEECCCHH
TQKELIDKDIKNMEDLSAKLPQFAHANVAMPAWMPNPNAK
HHHHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA