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The map label for this gene is rpe [H]

Identifier: 13476026

GI number: 13476026

Start: 5973326

End: 5974048

Strand: Direct

Name: rpe [H]

Synonym: mlr7233

Alternate gene names: 13476026

Gene position: 5973326-5974048 (Clockwise)

Preceding gene: 13476025

Following gene: 13476027

Centisome position: 84.9

GC content: 65.98

Gene sequence:

>723_bases
ATGACTTCAAAGCCCCTGTCAGGCCCGGCGGCAATAGCCGCATTGCCGCGCGATCGCTTGATCGCCGAATTCTCGCTTTG
GTCGGCCAATCTCGCCAATTTCGAGAGCGACCTCAGGCGCATCGAACCCCATGTCGATCTGCATCACATCGATGTGGCGG
ACGGCCACTTCGCCCCGTCCTTCCTGTTCTTCCCCGATCTCGTCGCCCGCATCGCCGGACTGACGGCCAAACCCATCCAT
GTCCATTTGATGGTCGATGCCGCAATTGTCGAGGCGCAGACGCGCCAGTTCATCGAGGCCGGCGCCGACATGATCAGCGT
CCATGCCGAGAACGGCGAGGCTGGATTGCGCGCCGTGCGGCTGGCGCGCGAACTCGGCGCCGAAGCGGGCGTCGTGTTGA
GGCTTGAGACGCCGGTCGAGGCAGTGAAGCCTTTCGTCTCCGAGGTCGCCTTCGTCACCCTGCTGGGAACCGCGATCGGC
GTGAAGGGCCAGAGCCTGTCGGACAAGGCATGCGACAGGCTGGGCGCTGCCCGTGCCATCTTGCGAGGAGCCGGCCGTGA
GGCAGAAGTGGCGCTTGCCGCCGACGGCGGCATCCGCCACGAGACCGTGCCCTTGCTGCGTGCCGCCGGTGCGGAGACCG
TCGTTCTCGGTTCGCTCGCCTTCGGCGACAAGGATCTCGCCGGCCGCATCGGCTGGCTGCATGGGCTGAAGGTCGCGGCA
TGA

Upstream 100 bases:

>100_bases
AGGTGACGCCGAAAGCGGCCGACAAGGATCGCCACTTCGCCGAAATCCGCGCCGCTATCGGCGGCTTTCTCGACAGACAC
TTCAACAATCAGGACCAATC

Downstream 100 bases:

>100_bases
GCATCGAAGCCGCCCTCGCGATCGATCTTGGCGGCACCGAGCTTCGTGCCGCGCTGGTCGACCGTGACGGCAAGATCCTG
GCCTTCGCCGCCGTGCCGAC

Product: ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTSKPLSGPAAIAALPRDRLIAEFSLWSANLANFESDLRRIEPHVDLHHIDVADGHFAPSFLFFPDLVARIAGLTAKPIH
VHLMVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVKPFVSEVAFVTLLGTAIG
VKGQSLSDKACDRLGAARAILRGAGREAEVALAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA

Sequences:

>Translated_240_residues
MTSKPLSGPAAIAALPRDRLIAEFSLWSANLANFESDLRRIEPHVDLHHIDVADGHFAPSFLFFPDLVARIAGLTAKPIH
VHLMVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVKPFVSEVAFVTLLGTAIG
VKGQSLSDKACDRLGAARAILRGAGREAEVALAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA
>Mature_239_residues
TSKPLSGPAAIAALPRDRLIAEFSLWSANLANFESDLRRIEPHVDLHHIDVADGHFAPSFLFFPDLVARIAGLTAKPIHV
HLMVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVKPFVSEVAFVTLLGTAIGV
KGQSLSDKACDRLGAARAILRGAGREAEVALAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA

Specific function: D-ALLOSE METABOLISM. ESSENTIAL FOR THIS PATHWAY. [C]

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=204, Percent_Identity=25.9803921568627, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1790523, Length=196, Percent_Identity=33.1632653061224, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789788, Length=220, Percent_Identity=30.9090909090909, Blast_Score=86, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322341, Length=223, Percent_Identity=23.3183856502242, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25247; Mature: 25116

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKPLSGPAAIAALPRDRLIAEFSLWSANLANFESDLRRIEPHVDLHHIDVADGHFAPS
CCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH
FLFFPDLVARIAGLTAKPIHVHLMVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVR
HHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LARELGAEAGVVLRLETPVEAVKPFVSEVAFVTLLGTAIGVKGQSLSDKACDRLGAARAI
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LRGAGREAEVALAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA
HHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCEEECC
>Mature Secondary Structure 
TSKPLSGPAAIAALPRDRLIAEFSLWSANLANFESDLRRIEPHVDLHHIDVADGHFAPS
CCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH
FLFFPDLVARIAGLTAKPIHVHLMVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVR
HHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LARELGAEAGVVLRLETPVEAVKPFVSEVAFVTLLGTAIGVKGQSLSDKACDRLGAARAI
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LRGAGREAEVALAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA
HHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]