| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475960
Identifier: 13475960
GI number: 13475960
Start: 5908969
End: 5910114
Strand: Reverse
Name: 13475960
Synonym: mll7157
Alternate gene names: NA
Gene position: 5910114-5908969 (Counterclockwise)
Preceding gene: 13475961
Following gene: 13475957
Centisome position: 84.0
GC content: 66.32
Gene sequence:
>1146_bases ATGACCTGGAGCCATCCGCGCGGCTACGATCCGATGGTCGCCTGCTCTTCGCTTTGGCAGCAGAAGACCGGCGTCGCTAT CCACTGGGACAAGCGCTCGCTGCAGGATTTCGAATCCTTCCCGGTCGAGGAACTGGCGCGCGCCTATGATCTGATCGTCA TCGACCACCCGCATGTCGGCCAGATCACCGCGGAATGCTGCCTCGCACCGCTGGATGTCGCCGGCCGCGAGGCCGAGCGC GCAGCCCTTGCATCGGGGAGTGTCGGCCAGTCCTATCCGAGCTACAACTGGCGAGGGCGGCAATGGGCCTTCCCGATCGA TGCCGCCAGCCAGGTCCAGGCCTGGCGGCCGGATGCGCTCGACGCGCCGCCGGCGCGCTGGAGCGAGGTGCTCGATTTCG CCCGGCAAGGCCGCGTGCTTTTGCCGCTGCGCCCGCCGCATGTGCTGATGGTGTTCTACACACTGGCCGGCAATCTCGGG CACGCTTGCGCGACTGATCCGTCCCTCGATCTCATCGATAGCGAGACCGGCAGCGAAGTCTTCGAGAAGATGCGCGAGAT CGCCGCACTGGTCGAACCGGCCTGTTTCGAGATGGATCCGATCGCGGTTTCAGAACGCATGGCGGAGGCGGATTCCAAGA TCGTCTGCGCTCCGCTGATCTATGGCTATGTCTCCTATGCGATAGCAGGGTTTCGCGCGCGCCGGCTGGCCTTCACCGAC ATCCCGGTCGTTGGCGCCAACGGCCCTGTCGGTTCGGCGCTCGGCGGCACGGGCATAGCGGTGTCAGGCTTTTCCAAGGC GAAGGATGCGGCGACGGACTTCGCCTATTGGGTTGCCAGCGGCGACGTGCAACGCAGCGCCTATGCCGCTGCCGGTGGCC AACCAGGCCATGCTGCCGCCTGGGAGGACCAGACGGTCAACGCCGCGACCGGCAATTTCTATCACGACACGCGCGCGACG CTGGAGGGCGCATGGGTGCGGCCGCGCCATGACGGCTACATGGCGTTCCAGCAGGCAGCGTCTGACCGCCTCCTGTCCGG CATGACTTCCGGCCACAAAGCCTCCCAGGTGGTTGCCGATCTCATCAGCCTGTTTCGCGAGAGTCCCCCGGCGCAGGTGT CCGGCGCTGCCGGCGGAGGAGCCTGA
Upstream 100 bases:
>100_bases TCGACGGCATCAGGGCCAAGGTCGATCGCGCGGCACCACGCATCGGCGAGCACAGTGCCGCGATCCGCGAGGAGTTCGGC CTGTGACCACGCTCAAGGGC
Downstream 100 bases:
>100_bases ACGAAGCCGAACGGAGGAGAACGTCTGGGCCACGTCTCAGCGAGAGGCAAATCCAACTATTCCAGCCGCCAGAGCTTGCG GGCATTGCCCGACAGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar ABC Transporter
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTWSHPRGYDPMVACSSLWQQKTGVAIHWDKRSLQDFESFPVEELARAYDLIVIDHPHVGQITAECCLAPLDVAGREAER AALASGSVGQSYPSYNWRGRQWAFPIDAASQVQAWRPDALDAPPARWSEVLDFARQGRVLLPLRPPHVLMVFYTLAGNLG HACATDPSLDLIDSETGSEVFEKMREIAALVEPACFEMDPIAVSERMAEADSKIVCAPLIYGYVSYAIAGFRARRLAFTD IPVVGANGPVGSALGGTGIAVSGFSKAKDAATDFAYWVASGDVQRSAYAAAGGQPGHAAAWEDQTVNAATGNFYHDTRAT LEGAWVRPRHDGYMAFQQAASDRLLSGMTSGHKASQVVADLISLFRESPPAQVSGAAGGGA
Sequences:
>Translated_381_residues MTWSHPRGYDPMVACSSLWQQKTGVAIHWDKRSLQDFESFPVEELARAYDLIVIDHPHVGQITAECCLAPLDVAGREAER AALASGSVGQSYPSYNWRGRQWAFPIDAASQVQAWRPDALDAPPARWSEVLDFARQGRVLLPLRPPHVLMVFYTLAGNLG HACATDPSLDLIDSETGSEVFEKMREIAALVEPACFEMDPIAVSERMAEADSKIVCAPLIYGYVSYAIAGFRARRLAFTD IPVVGANGPVGSALGGTGIAVSGFSKAKDAATDFAYWVASGDVQRSAYAAAGGQPGHAAAWEDQTVNAATGNFYHDTRAT LEGAWVRPRHDGYMAFQQAASDRLLSGMTSGHKASQVVADLISLFRESPPAQVSGAAGGGA >Mature_380_residues TWSHPRGYDPMVACSSLWQQKTGVAIHWDKRSLQDFESFPVEELARAYDLIVIDHPHVGQITAECCLAPLDVAGREAERA ALASGSVGQSYPSYNWRGRQWAFPIDAASQVQAWRPDALDAPPARWSEVLDFARQGRVLLPLRPPHVLMVFYTLAGNLGH ACATDPSLDLIDSETGSEVFEKMREIAALVEPACFEMDPIAVSERMAEADSKIVCAPLIYGYVSYAIAGFRARRLAFTDI PVVGANGPVGSALGGTGIAVSGFSKAKDAATDFAYWVASGDVQRSAYAAAGGQPGHAAAWEDQTVNAATGNFYHDTRATL EGAWVRPRHDGYMAFQQAASDRLLSGMTSGHKASQVVADLISLFRESPPAQVSGAAGGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40830; Mature: 40699
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWSHPRGYDPMVACSSLWQQKTGVAIHWDKRSLQDFESFPVEELARAYDLIVIDHPHVG CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCHHHHHHHHCEEEECCCCCC QITAECCLAPLDVAGREAERAALASGSVGQSYPSYNWRGRQWAFPIDAASQVQAWRPDAL HHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCC DAPPARWSEVLDFARQGRVLLPLRPPHVLMVFYTLAGNLGHACATDPSLDLIDSETGSEV CCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHH FEKMREIAALVEPACFEMDPIAVSERMAEADSKIVCAPLIYGYVSYAIAGFRARRLAFTD HHHHHHHHHHHCHHHCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEC IPVVGANGPVGSALGGTGIAVSGFSKAKDAATDFAYWVASGDVQRSAYAAAGGQPGHAAA CCEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCCCCC WEDQTVNAATGNFYHDTRATLEGAWVRPRHDGYMAFQQAASDRLLSGMTSGHKASQVVAD CCCCCCCCCCCCEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LISLFRESPPAQVSGAAGGGA HHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TWSHPRGYDPMVACSSLWQQKTGVAIHWDKRSLQDFESFPVEELARAYDLIVIDHPHVG CCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCHHHHHHHHCEEEECCCCCC QITAECCLAPLDVAGREAERAALASGSVGQSYPSYNWRGRQWAFPIDAASQVQAWRPDAL HHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCC DAPPARWSEVLDFARQGRVLLPLRPPHVLMVFYTLAGNLGHACATDPSLDLIDSETGSEV CCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHH FEKMREIAALVEPACFEMDPIAVSERMAEADSKIVCAPLIYGYVSYAIAGFRARRLAFTD HHHHHHHHHHHCHHHCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEC IPVVGANGPVGSALGGTGIAVSGFSKAKDAATDFAYWVASGDVQRSAYAAAGGQPGHAAA CCEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCCCCC WEDQTVNAATGNFYHDTRATLEGAWVRPRHDGYMAFQQAASDRLLSGMTSGHKASQVVAD CCCCCCCCCCCCEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LISLFRESPPAQVSGAAGGGA HHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA