Click here to switch to the map view.

The map label for this gene is 13475906

Identifier: 13475906

GI number: 13475906

Start: 5850399

End: 5851436

Strand: Reverse

Name: 13475906

Synonym: mll7088

Alternate gene names: NA

Gene position: 5851436-5850399 (Counterclockwise)

Preceding gene: 13475907

Following gene: 13475905

Centisome position: 83.16

GC content: 58.57

Gene sequence:

>1038_bases
ATGGCGTTGATCGCGGGCGAACACCTCGACCTGCAGGGGGGAGTAAGTACGAAATGCGGCGCGTTGGCATGGCCGCCCTC
GCTCATTAGACTTGTCATTTCGGCCAAGTTCAGTAATTGCGCCATATTAGTTGAGCGGCCAGCATGGCATCCGGAAGCAT
ACAACGAAGGATTGAGGAACTTGGTCGAACTCAACACCCACATTGCGCATGCTGCGCGTGAGCGGAACTCCCCGCGAGTC
GTCGCGGTGCTTACAACACGGAACGAAGAACGGTTCGTCGCCGGATGTCTCGAGAACCTCTTTCATCAAGGCGTACAGGT
CTACATTTGCGACAATCAGTCGACGGACAGAACGCTTGAGATTGCCCAGCGCTACCGCGGGGCCGGATTGATAGGATTCG
AAAGCATCCCGCACAACGGCTGGTATTGCTGGGAGCAGCTTCTTCGTCGCAAAGAGGAACTATTTCAGTCGCTCGAAGCT
GACTGGCTCATGCATCTTGACGCTGACGAGATCCACCTTCCGCCGACTTCATACTCATCGTTGGTCTCCGCCATTGCAGC
AGCTGACGCACTCGGCTTCAATGCGATCGAGTCTTCCGAGTTCACGTTCATTCCCACCAGGGAAGCCCCCGATCACGACA
ATCCCGATTATCAACACACGCTGCGCACCTACTACCCCTTCCGGCCGTTCTCCCCGCACTGCGTTCGTGCGTACAAGAAA
CAGGACGGCCCCATTGAGATTGCGTGGTCAGGGGGCCATCGCGTACGCTTCGAGGGACCGGTGAGGCTCTCCCCCGAGCG
TTTTCGCATGAAGCATTATCTGTTCCTGAGCGCAGAGCACGCCGCGCGCAAGTATGGTGGCCGCCGGTTCCTGAGCGAGG
AGGTCGATGGTCGTGGTTGGCACGGATGGCGACCCCGCTTGCGGCCAGAGGATATCCAACTGCCGGACATTACCCAGGTG
CGCACCACTGCGACAGACGATGATCTGGACGAGGCCAATCCATGGCTGGCGCACTGGCTTGCGCGGTACGCCTCGTGA

Upstream 100 bases:

>100_bases
CCTCAGGGCCTCGACAGGTCGTTGATCCGATAGCGTAGAGCGAAGAACCGGGTGAAACGCAGCGGGGCGGCCCCGACTGG
GCGCCTTTTCCTGCCATGGA

Downstream 100 bases:

>100_bases
GCGACGTACACCTCCCCCGCATCCTGGCGATCGCGGACCGACCCGGCTGGGCGATCGATAGAAAAACCCAGAATCTTCGG
CGCGTGCTGGAAAGAAGGTT

Product: lipopolysaccharide core biosynthesis glycosyl transferase LPSC

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MALIAGEHLDLQGGVSTKCGALAWPPSLIRLVISAKFSNCAILVERPAWHPEAYNEGLRNLVELNTHIAHAARERNSPRV
VAVLTTRNEERFVAGCLENLFHQGVQVYICDNQSTDRTLEIAQRYRGAGLIGFESIPHNGWYCWEQLLRRKEELFQSLEA
DWLMHLDADEIHLPPTSYSSLVSAIAAADALGFNAIESSEFTFIPTREAPDHDNPDYQHTLRTYYPFRPFSPHCVRAYKK
QDGPIEIAWSGGHRVRFEGPVRLSPERFRMKHYLFLSAEHAARKYGGRRFLSEEVDGRGWHGWRPRLRPEDIQLPDITQV
RTTATDDDLDEANPWLAHWLARYAS

Sequences:

>Translated_345_residues
MALIAGEHLDLQGGVSTKCGALAWPPSLIRLVISAKFSNCAILVERPAWHPEAYNEGLRNLVELNTHIAHAARERNSPRV
VAVLTTRNEERFVAGCLENLFHQGVQVYICDNQSTDRTLEIAQRYRGAGLIGFESIPHNGWYCWEQLLRRKEELFQSLEA
DWLMHLDADEIHLPPTSYSSLVSAIAAADALGFNAIESSEFTFIPTREAPDHDNPDYQHTLRTYYPFRPFSPHCVRAYKK
QDGPIEIAWSGGHRVRFEGPVRLSPERFRMKHYLFLSAEHAARKYGGRRFLSEEVDGRGWHGWRPRLRPEDIQLPDITQV
RTTATDDDLDEANPWLAHWLARYAS
>Mature_344_residues
ALIAGEHLDLQGGVSTKCGALAWPPSLIRLVISAKFSNCAILVERPAWHPEAYNEGLRNLVELNTHIAHAARERNSPRVV
AVLTTRNEERFVAGCLENLFHQGVQVYICDNQSTDRTLEIAQRYRGAGLIGFESIPHNGWYCWEQLLRRKEELFQSLEAD
WLMHLDADEIHLPPTSYSSLVSAIAAADALGFNAIESSEFTFIPTREAPDHDNPDYQHTLRTYYPFRPFSPHCVRAYKKQ
DGPIEIAWSGGHRVRFEGPVRLSPERFRMKHYLFLSAEHAARKYGGRRFLSEEVDGRGWHGWRPRLRPEDIQLPDITQVR
TTATDDDLDEANPWLAHWLARYAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39451; Mature: 39320

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIAGEHLDLQGGVSTKCGALAWPPSLIRLVISAKFSNCAILVERPAWHPEAYNEGLRN
CCEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
LVELNTHIAHAARERNSPRVVAVLTTRNEERFVAGCLENLFHQGVQVYICDNQSTDRTLE
HHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
IAQRYRGAGLIGFESIPHNGWYCWEQLLRRKEELFQSLEADWLMHLDADEIHLPPTSYSS
HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCHHH
LVSAIAAADALGFNAIESSEFTFIPTREAPDHDNPDYQHTLRTYYPFRPFSPHCVRAYKK
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHC
QDGPIEIAWSGGHRVRFEGPVRLSPERFRMKHYLFLSAEHAARKYGGRRFLSEEVDGRGW
CCCCEEEEECCCCEEEECCCCEECHHHHCEEEEEEEEHHHHHHHHCCHHHHHHHCCCCCC
HGWRPRLRPEDIQLPDITQVRTTATDDDLDEANPWLAHWLARYAS
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ALIAGEHLDLQGGVSTKCGALAWPPSLIRLVISAKFSNCAILVERPAWHPEAYNEGLRN
CEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
LVELNTHIAHAARERNSPRVVAVLTTRNEERFVAGCLENLFHQGVQVYICDNQSTDRTLE
HHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
IAQRYRGAGLIGFESIPHNGWYCWEQLLRRKEELFQSLEADWLMHLDADEIHLPPTSYSS
HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCHHH
LVSAIAAADALGFNAIESSEFTFIPTREAPDHDNPDYQHTLRTYYPFRPFSPHCVRAYKK
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHC
QDGPIEIAWSGGHRVRFEGPVRLSPERFRMKHYLFLSAEHAARKYGGRRFLSEEVDGRGW
CCCCEEEEECCCCEEEECCCCEECHHHHCEEEEEEEEHHHHHHHHCCHHHHHHHCCCCCC
HGWRPRLRPEDIQLPDITQVRTTATDDDLDEANPWLAHWLARYAS
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA