Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is rutB [H]

Identifier: 13475887

GI number: 13475887

Start: 5828675

End: 5829343

Strand: Direct

Name: rutB [H]

Synonym: mlr7067

Alternate gene names: 13475887

Gene position: 5828675-5829343 (Clockwise)

Preceding gene: 13475886

Following gene: 13475888

Centisome position: 82.84

GC content: 65.47

Gene sequence:

>669_bases
ATGGCGGAAATCGCAGCGCAGCCATTTCCGTTCGCGTTCAAGCCGCGGACCATGGCGCTGGTCGTCATCGACATGCAGCG
CGACTTCGCCGAGCCGGGCGGTTTCGGCGCCAGCCTCGGCAATGATGTCAGCCGTGTCGCGGCGATCGTGCCGACGGTGA
AGAGATTGATCGAGGGCTTTCGCGCTGCCGGCCTGCCGGTGATCCATACGATGGAGTGCCACAAACCCGATCTCTCCGAC
CTGCCGCCGGCCAAGCGCAATCGCGGCAATCCGTCGATCCGAATCGGCGACGCCGGGCCGATGGGCCGCGTGCTGATCGC
CGGCGAACCGGGCACGGCGATCCTCGATGAACTCGTGCCGCTGCCCGGCGAGATCGTCATCGAGAAGCCCGGCAAGGGCG
CCTTCTATGCCACCTCTTTCGGCGACGAGCTGAAAAGGCTTGGCGCCGAGCAGCTGGTCTTTGCCGGCGTCACCACCGAG
GTCTGCGTGCAGACCACGATGCGCGAGGCCAACGATCGCGGCTATGAGTGCCTGCTCGCCGAGGACGCAACGGAAAGCTA
CTTTCCCGAGTTCAAGACGGCGGCGATCGCCATGATCAGGGCGCAGGGCGCCATCGTCGGCTGGACGGCGACGACCGACC
AGGTGCTTGAGGGAATTGCCAATGCCTAA

Upstream 100 bases:

>100_bases
ATCGCATCTTCGTCATGTCTGACGGCGCGCTGGTCTACGAAACGCCGATCGCGCAGGCCAGCGTCCAGACTATCGGCGAG
CACATGGCGGGACATCACTG

Downstream 100 bases:

>100_bases
TCTTGCCTTTGCCGGCCTGCTCGACGGCGGCTGGCGCGATCTGGCGTTCGAGCATTTCCGCGACGGCATCGGCGTGCACT
GGTTGCTGAAGGGCGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Ureidoacrylate amidohydrolase [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGFRAAGLPVIHTMECHKPDLSD
LPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVPLPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTE
VCVQTTMREANDRGYECLLAEDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA

Sequences:

>Translated_222_residues
MAEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGFRAAGLPVIHTMECHKPDLSD
LPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVPLPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTE
VCVQTTMREANDRGYECLLAEDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA
>Mature_221_residues
AEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGFRAAGLPVIHTMECHKPDLSDL
PPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVPLPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTEV
CVQTTMREANDRGYECLLAEDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA

Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family. RutB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081820, Length=232, Percent_Identity=29.3103448275862, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019916
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23644; Mature: 23513

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGF
CCCCCCCCCCCEECCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RAAGLPVIHTMECHKPDLSDLPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVP
HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHCC
LPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTEVCVQTTMREANDRGYECLLA
CCCEEEEECCCCCCEEECCHHHHHHHCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEEE
EDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA
CCCCHHHCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
AEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGF
CCCCCCCCCCEECCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RAAGLPVIHTMECHKPDLSDLPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVP
HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHCC
LPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTEVCVQTTMREANDRGYECLLA
CCCEEEEECCCCCCEEECCHHHHHHHCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEEE
EDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA
CCCCHHHCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA