| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475847
Identifier: 13475847
GI number: 13475847
Start: 5784926
End: 5785996
Strand: Reverse
Name: 13475847
Synonym: mll7019
Alternate gene names: NA
Gene position: 5785996-5784926 (Counterclockwise)
Preceding gene: 13475848
Following gene: 13475846
Centisome position: 82.23
GC content: 60.88
Gene sequence:
>1071_bases GTGCCCATGTGGCAAGCCAAGCCGATCGTGTTTTTGGGAGGAAATACCATGAAATTTACAATCGTGGCGGCGCTCGCCAG CGCTGCGATGATGGGCGTTGCTGTGATGCCGGCAATGGCATCTTCGGACGCGCCGGTCATCGCGCTCACTAACGCCTATT ACGGCAACACCTGGCGGCATCAGATGGTGGAGGCTTTCGAAGCGTCGGCCAAGGAAGCGAAGGCGGCTGGGCAGATCGCC GATTACATCGTCATGAATGGCGATGGTTCGGTGGCGCAGCAGAACAGCCAGATCGCCGAACTGATCCTCAAGAAGGTCGA CGTGCTCGCCGTCGACGCCGCCTCGGAAACCGCGGTCAACGGCATCATCGAGAAAGCCTGCAAGGCCGGCATCATCGTCG TCTCCTTCGATTCTGTCGCGTCTGCGTCCTGCAACTACCAGCTCAATTTCGACTTCAAGGGCTACAAGGCGACCCAGGCG GAAGCTGTGTTCAAGATGCTCGGCGGCAAGGGCAACGTCATCCAGGTGCGCGGCGTCAAGGGCTCGGCCCCGGACAACGA CATGTTCAACGCGCAGCAATCGGTGCTGGCGAAATATCCCGACATCAAGGTTGTCGCCACCGTCTATGGCCAGGCGACCG CCTCGGTGGCGCAGGCGGCCATCGCCAATGTCCTGCCCTCGCTGCCGCATGTCGATGCGGTGCTCGGCCAGGGCGGCAGC GACGATGTCGGCATTGCCCAAGCCTTCGTCCAGTATGGCGGCGAGTACAAGGACAAGATGCCGATCATCGAGGGCGGCGG CGGTACCGACTTCGTCAAATGGTGGGCCGACGAGAACGCCAAGAACAGCTACCAGACCGTCTCCATGAACACGACGCCGG GCATTGGCGGCGCTGCTTTCTGGCTCGGCCTGTCCCTGCTCAAAGGCGCCAAGGCGCCCAAGATGATGATCATGCCGGTC GCAACAGTCGATGCCAGCAACCTCAAGGAATACGCCAAGCTGCCGGGCGGCCAGATCATCAGCCCAAGCTATTCGCTCGA CTGGGTCAAGCAGAATTTGCTGAGCAAGTAA
Upstream 100 bases:
>100_bases GCTTTTCACCCAGCGACCCCGCGCAGGCAGCAAAGCCCTTGTCTATTTGGTATGCTGGTATAATATGTACCTGACATAGC GTGTCCCCAAGGGTTCCGCT
Downstream 100 bases:
>100_bases CGCGACAAGCACAAGGGATCGGACCGCCGAAAGCGCCCGATCCCTGACCGTGAAGAACGGAGGACGAATGTCCCACCTTG CCGTTGCCGATCAGAAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Two Component Transcriptional Regulator AraC Family; AraC Family Transcriptional Regulator; Sugar ABC Transporter; ABC Transporter Component
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPMWQAKPIVFLGGNTMKFTIVAALASAAMMGVAVMPAMASSDAPVIALTNAYYGNTWRHQMVEAFEASAKEAKAAGQIA DYIVMNGDGSVAQQNSQIAELILKKVDVLAVDAASETAVNGIIEKACKAGIIVVSFDSVASASCNYQLNFDFKGYKATQA EAVFKMLGGKGNVIQVRGVKGSAPDNDMFNAQQSVLAKYPDIKVVATVYGQATASVAQAAIANVLPSLPHVDAVLGQGGS DDVGIAQAFVQYGGEYKDKMPIIEGGGGTDFVKWWADENAKNSYQTVSMNTTPGIGGAAFWLGLSLLKGAKAPKMMIMPV ATVDASNLKEYAKLPGGQIISPSYSLDWVKQNLLSK
Sequences:
>Translated_356_residues MPMWQAKPIVFLGGNTMKFTIVAALASAAMMGVAVMPAMASSDAPVIALTNAYYGNTWRHQMVEAFEASAKEAKAAGQIA DYIVMNGDGSVAQQNSQIAELILKKVDVLAVDAASETAVNGIIEKACKAGIIVVSFDSVASASCNYQLNFDFKGYKATQA EAVFKMLGGKGNVIQVRGVKGSAPDNDMFNAQQSVLAKYPDIKVVATVYGQATASVAQAAIANVLPSLPHVDAVLGQGGS DDVGIAQAFVQYGGEYKDKMPIIEGGGGTDFVKWWADENAKNSYQTVSMNTTPGIGGAAFWLGLSLLKGAKAPKMMIMPV ATVDASNLKEYAKLPGGQIISPSYSLDWVKQNLLSK >Mature_355_residues PMWQAKPIVFLGGNTMKFTIVAALASAAMMGVAVMPAMASSDAPVIALTNAYYGNTWRHQMVEAFEASAKEAKAAGQIAD YIVMNGDGSVAQQNSQIAELILKKVDVLAVDAASETAVNGIIEKACKAGIIVVSFDSVASASCNYQLNFDFKGYKATQAE AVFKMLGGKGNVIQVRGVKGSAPDNDMFNAQQSVLAKYPDIKVVATVYGQATASVAQAAIANVLPSLPHVDAVLGQGGSD DVGIAQAFVQYGGEYKDKMPIIEGGGGTDFVKWWADENAKNSYQTVSMNTTPGIGGAAFWLGLSLLKGAKAPKMMIMPVA TVDASNLKEYAKLPGGQIISPSYSLDWVKQNLLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37411; Mature: 37280
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMWQAKPIVFLGGNTMKFTIVAALASAAMMGVAVMPAMASSDAPVIALTNAYYGNTWRH CCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH QMVEAFEASAKEAKAAGQIADYIVMNGDGSVAQQNSQIAELILKKVDVLAVDAASETAVN HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHH GIIEKACKAGIIVVSFDSVASASCNYQLNFDFKGYKATQAEAVFKMLGGKGNVIQVRGVK HHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECC GSAPDNDMFNAQQSVLAKYPDIKVVATVYGQATASVAQAAIANVLPSLPHVDAVLGQGGS CCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC DDVGIAQAFVQYGGEYKDKMPIIEGGGGTDFVKWWADENAKNSYQTVSMNTTPGIGGAAF CCHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHH WLGLSLLKGAKAPKMMIMPVATVDASNLKEYAKLPGGQIISPSYSLDWVKQNLLSK HHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCC >Mature Secondary Structure PMWQAKPIVFLGGNTMKFTIVAALASAAMMGVAVMPAMASSDAPVIALTNAYYGNTWRH CCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH QMVEAFEASAKEAKAAGQIADYIVMNGDGSVAQQNSQIAELILKKVDVLAVDAASETAVN HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHH GIIEKACKAGIIVVSFDSVASASCNYQLNFDFKGYKATQAEAVFKMLGGKGNVIQVRGVK HHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECC GSAPDNDMFNAQQSVLAKYPDIKVVATVYGQATASVAQAAIANVLPSLPHVDAVLGQGGS CCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC DDVGIAQAFVQYGGEYKDKMPIIEGGGGTDFVKWWADENAKNSYQTVSMNTTPGIGGAAF CCHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHH WLGLSLLKGAKAPKMMIMPVATVDASNLKEYAKLPGGQIISPSYSLDWVKQNLLSK HHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA