| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475790
Identifier: 13475790
GI number: 13475790
Start: 5718122
End: 5719078
Strand: Reverse
Name: 13475790
Synonym: mll6957
Alternate gene names: NA
Gene position: 5719078-5718122 (Counterclockwise)
Preceding gene: 13475799
Following gene: 13475787
Centisome position: 81.28
GC content: 63.01
Gene sequence:
>957_bases ATGACACGCGTAGTGATCATCGGCGGCAGCGGGCATGTCGGCACGTACCTAGTGCCGCGGCTGGTCGAGGCCGGATATGA AGTGGTCAATGTCAGCCGCGGCCAGCGCGCAGCCTATACGCTGAATGCGGCGTGGAAATCGGTCGAGCCCGTAGTGATCG ACCGCGACACGGAGGAGAAGGCTGGCACATTCGGCGAGAAGGTCCGCGCGCTGAAGGCCGATATCGTGGTGGACATGATT TCCTTCACCCTCGACAGCACCAAGCAGATCGTTGGTGCGCTGCGAGGCGAGGTGCAGCACTTCCTCCATTGCGGCACCAT CTGGGTCTATGGGCACAATACCGCAATCCCCGCGACAGAGGACCAGCCGAAGAATCCGTTCGGCAGCTATGGCACGCAAA AGGCCGAGATCGAGAGCTGGCTGCTCAACGAAGCCAGGCGGAACGGTTTTCCAGCCACGGTGTTTCGTCCCGGCCATATC GTGGGGCCTGGCTGGGAGCCGCTCAATCCGGCGGGGCACTTCGACGTCGGTGTGTTCTCCCAGATCGCCCGTGGCGAGCC GCTGGTGCTGCCCAATCTTGGCAACGAGACAGTGCACCACGTGCATGCCGACGACGTAGCACAGATGGTGATGCGCGCCA TTGTGAGTTGGAGCAACGCGGTGGGCGAGGCCTTCAACACCGTCTCGCCTCAGGCGATCAATCTGCGCGGCTACGCCGAG GCCCTGTACAACTGGTTCGGCCACGCCCCGCGGCTGAGCTACGAGCCGTTCGATACGTGGAAGGGCAAGCAGACCGAAGA AAATTGGCGCGCCACCTGGGAGCACATTGCACGCAGCCCGAGCCATTCGATCGCCAAGGCGCGGAACCTCCTGGGCTACG ACCCGCGGTATTCGTCGCTCCAGGCAGTGTATGAGTCCGTCGAGTGGCTGGTGGCGAACGGGAAACTCAGCCGGTAG
Upstream 100 bases:
>100_bases TCTGTGCGCATCGGCAGGTCTGGGCGTTGACCCGCGGCGGAATCGAGTGGCGTTCGCCAACTCCCAGTGGCACAATCCGC CAGCAATCGGCGAGGCGAAA
Downstream 100 bases:
>100_bases GAGTGCCCAGATACTTCTCAGCCTCGGCGCAGGTCGAAACCCGCATTGCGTCTATCAAATTAGAATGCGGGTTTTTCTCG CCAAGCGTAACTTGAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleotide Sugar Epimerase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family Protein; Oxidoreductase Gfo/Idh/MocA Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Isoflavone Reductase; Oxidoreductase Domain Protein; Nucleotide Sugar Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; NDP-Glucose 4 6-Dehydratase; Lipoprotein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEKAGTFGEKVRALKADIVVDMI SFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHI VGPGWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSLQAVYESVEWLVANGKLSR
Sequences:
>Translated_318_residues MTRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEKAGTFGEKVRALKADIVVDMI SFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHI VGPGWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSLQAVYESVEWLVANGKLSR >Mature_317_residues TRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEKAGTFGEKVRALKADIVVDMIS FTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIV GPGWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAEA LYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSLQAVYESVEWLVANGKLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35230; Mature: 35099
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEK CCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHCCCCCEEEECCCHHH AGTFGEKVRALKADIVVDMISFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC DQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIVGPGWEPLNPAGHFDVGVFS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCHHHHH QIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE HHHCCCCEEECCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSL HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH QAVYESVEWLVANGKLSR HHHHHHHHHEEECCCCCC >Mature Secondary Structure TRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEK CEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHCCCCCEEEECCCHHH AGTFGEKVRALKADIVVDMISFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC DQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIVGPGWEPLNPAGHFDVGVFS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCHHHHH QIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE HHHCCCCEEECCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSL HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH QAVYESVEWLVANGKLSR HHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA