| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475750
Identifier: 13475750
GI number: 13475750
Start: 5680499
End: 5681146
Strand: Reverse
Name: 13475750
Synonym: mll6904
Alternate gene names: NA
Gene position: 5681146-5680499 (Counterclockwise)
Preceding gene: 13475753
Following gene: 229259630
Centisome position: 80.74
GC content: 65.74
Gene sequence:
>648_bases ATGCCACTGCAGAACCGGGTCGATGCGTTCGGCGCCATCCACACCGTGCCCGAGCGCGGGCTGTTCACCGGCAATCGCGG CATCATCCACGACCCCGCGACCAAGACGTTGTTGAAGAAGCGCTGGGCGCTTCAGGCCTGGATCATCTGCGTGTGCCAGT TTCGCAATGTGCGGCGCGAGCCGATGGGCCGTAACAGGCCGGGAGGCAAGGCCGGATGGACCGAGCTTTTCTTCCTAGAC GAAATGACGGCGCTGGCCGCCGGTCATCGGCCGTGCTTCTTTTGCCAGCGCGAACGGGCCAAGGATTTTGTCGGCCGCTT CGGCGAAGCCTTCGGCATTGCCGAGCCGCGCGCGCCGATGGTCGACAAGCGCCTGCACAAGGAGCGGCTGGCGTCGGGTG GCAAGCCACCTGTCGTTGTCGCTGAAGACCTTCGCGGCCTGCCAGATGGCGCCATGGTTGCGGATGGGGGCAAAGCCTAT GCACTGCGCGGCGGCAAGGTGCTGCGCTGGTCGTTCGCCGGGTACGGCCCACCCGCCGATTTCGGTTCACTCGGCGAAAA GGCGCTTATGCTGCTGACCCCGGGGACGACACTAGCCGTCCTGCGGCACGGTTTTCGGCCGGTGTGGCATCCATCCGCCA AGGCTTGA
Upstream 100 bases:
>100_bases CAGCACCCGCATCGCAAAACCCTGCTGACATGAAAATGATGCCACGAGCGATATCATGCCGCCCGCATTGCAGCCAAGAT GCGTATTCCAGGAGAGAACT
Downstream 100 bases:
>100_bases CGCCAGCGGCCGGCTCGCTCATTCCTCGGCCATGCGCGCCAATTACAAGATGCAACGTCTGTTCGTGCCTGACGATCTCG GGCCGGATGCCGAGTTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPLQNRVDAFGAIHTVPERGLFTGNRGIIHDPATKTLLKKRWALQAWIICVCQFRNVRREPMGRNRPGGKAGWTELFFLD EMTALAAGHRPCFFCQRERAKDFVGRFGEAFGIAEPRAPMVDKRLHKERLASGGKPPVVVAEDLRGLPDGAMVADGGKAY ALRGGKVLRWSFAGYGPPADFGSLGEKALMLLTPGTTLAVLRHGFRPVWHPSAKA
Sequences:
>Translated_215_residues MPLQNRVDAFGAIHTVPERGLFTGNRGIIHDPATKTLLKKRWALQAWIICVCQFRNVRREPMGRNRPGGKAGWTELFFLD EMTALAAGHRPCFFCQRERAKDFVGRFGEAFGIAEPRAPMVDKRLHKERLASGGKPPVVVAEDLRGLPDGAMVADGGKAY ALRGGKVLRWSFAGYGPPADFGSLGEKALMLLTPGTTLAVLRHGFRPVWHPSAKA >Mature_214_residues PLQNRVDAFGAIHTVPERGLFTGNRGIIHDPATKTLLKKRWALQAWIICVCQFRNVRREPMGRNRPGGKAGWTELFFLDE MTALAAGHRPCFFCQRERAKDFVGRFGEAFGIAEPRAPMVDKRLHKERLASGGKPPVVVAEDLRGLPDGAMVADGGKAYA LRGGKVLRWSFAGYGPPADFGSLGEKALMLLTPGTTLAVLRHGFRPVWHPSAKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23629; Mature: 23498
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQNRVDAFGAIHTVPERGLFTGNRGIIHDPATKTLLKKRWALQAWIICVCQFRNVRRE CCCCHHHHHHHHHHCCCCCCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PMGRNRPGGKAGWTELFFLDEMTALAAGHRPCFFCQRERAKDFVGRFGEAFGIAEPRAPM CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH VDKRLHKERLASGGKPPVVVAEDLRGLPDGAMVADGGKAYALRGGKVLRWSFAGYGPPAD HHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCEEECCCCEEEEECCEEEEEECCCCCCCCC FGSLGEKALMLLTPGTTLAVLRHGFRPVWHPSAKA CHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PLQNRVDAFGAIHTVPERGLFTGNRGIIHDPATKTLLKKRWALQAWIICVCQFRNVRRE CCCHHHHHHHHHHCCCCCCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PMGRNRPGGKAGWTELFFLDEMTALAAGHRPCFFCQRERAKDFVGRFGEAFGIAEPRAPM CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH VDKRLHKERLASGGKPPVVVAEDLRGLPDGAMVADGGKAYALRGGKVLRWSFAGYGPPAD HHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCEEECCCCEEEEECCEEEEEECCCCCCCCC FGSLGEKALMLLTPGTTLAVLRHGFRPVWHPSAKA CHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA