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The map label for this gene is cyoC [H]

Identifier: 13475708

GI number: 13475708

Start: 5638927

End: 5639553

Strand: Direct

Name: cyoC [H]

Synonym: mlr6848

Alternate gene names: 13475708

Gene position: 5638927-5639553 (Clockwise)

Preceding gene: 13475707

Following gene: 13475709

Centisome position: 80.14

GC content: 62.2

Gene sequence:

>627_bases
ATGGATTCGATAGCGACCACGGCCGGCACCGAACCGGTCTTCCACCTGGAAGAAGAGCATGTGCATGCCGAAGGCAGCAG
CACCATGCTCGGCTTCTGGCTCTACCTGATGAGCGACTGCCTGATCTTCGCCATGCTCTTCGCGGCCTATGGCGTGCTTG
GCGCCAACTACGCTGCGGGACCCGCGCCGAAGGACCTGTTCGATCTCGATCTGGTGGCGGTCAACACCACCATGCTGCTC
CTCTCCTCGATCACCTATGGCTTTGCCATGCTGACCATGGACAAGGGCCGCGTCGCGGCGACGCAAGCCTGGCTTGCCGT
GACCGGCTTGTTCGGCCTGGCCTTCCTGTCGATCGAGCTCTACGAATTCGCGCACATGATCCACGAAGGCGCGACACCAC
AGCGCAGCGCCTTCCTGTCGTCCTTCTTCACGCTGGTCGGCACGCACGGCCTGCACGTCACCTTCGGCATCGTCTGGCTG
GTGACGCTGATGACGCAGGTCGCCCGGTTCGGCCTCATCGAGGCCAATCGCCGCCGGGTGATGTGCCTCTCGATGTTCTG
GCATTTCCTCGACGTCGTCTGGATCGGCGTCTTCACCTTCGTCTACCTGATGGGGATGTTGCGATGA

Upstream 100 bases:

>100_bases
TTTCAACTATCACCGCGACTTCCACATTCCGGCTGCCGAGGTCACACAAACGGAGGTGGCGAGGACGACGCTCCTTGCCG
CCCAGGGCTAGGGTTTAAGC

Downstream 100 bases:

>100_bases
GCGCTCCTGATCACGCCGAAGGCCATGGCCACGCCCATGGCGGCGCCGCGCATGGATCGTTCAAGGGCTATCTGATCGGC
TTCGTCCTGTCGGTGATCCT

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDSIATTAGTEPVFHLEEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAGPAPKDLFDLDLVAVNTTMLL
LSSITYGFAMLTMDKGRVAATQAWLAVTGLFGLAFLSIELYEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWL
VTLMTQVARFGLIEANRRRVMCLSMFWHFLDVVWIGVFTFVYLMGMLR

Sequences:

>Translated_208_residues
MDSIATTAGTEPVFHLEEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAGPAPKDLFDLDLVAVNTTMLL
LSSITYGFAMLTMDKGRVAATQAWLAVTGLFGLAFLSIELYEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWL
VTLMTQVARFGLIEANRRRVMCLSMFWHFLDVVWIGVFTFVYLMGMLR
>Mature_208_residues
MDSIATTAGTEPVFHLEEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAGPAPKDLFDLDLVAVNTTMLL
LSSITYGFAMLTMDKGRVAATQAWLAVTGLFGLAFLSIELYEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWL
VTLMTQVARFGLIEANRRRVMCLSMFWHFLDVVWIGVFTFVYLMGMLR

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=202, Percent_Identity=54.950495049505, Blast_Score=225, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23101; Mature: 23101

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIATTAGTEPVFHLEEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAG
CCCCCCCCCCCCEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAPKDLFDLDLVAVNTTMLLLSSITYGFAMLTMDKGRVAATQAWLAVTGLFGLAFLSIEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMTQVARFGLIEANRRRV
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHH
MCLSMFWHFLDVVWIGVFTFVYLMGMLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSIATTAGTEPVFHLEEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAG
CCCCCCCCCCCCEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAPKDLFDLDLVAVNTTMLLLSSITYGFAMLTMDKGRVAATQAWLAVTGLFGLAFLSIEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMTQVARFGLIEANRRRV
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCHHH
MCLSMFWHFLDVVWIGVFTFVYLMGMLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]