| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yieO [C]
Identifier: 13475703
GI number: 13475703
Start: 5631367
End: 5632956
Strand: Direct
Name: yieO [C]
Synonym: mlr6842
Alternate gene names: 13475703
Gene position: 5631367-5632956 (Clockwise)
Preceding gene: 13475691
Following gene: 13475704
Centisome position: 80.04
GC content: 64.34
Gene sequence:
>1590_bases TTGATATTGACATATATCTGCTGCGGGCACATAAACCGCCCCCGAACGTCGGAGACACCCATGAGCATTGACTCGACCCT CCCGGATGCGCCGCCCGCAGAGTCCGGGGCCAAGCCCGACATCACGACGCTGGTCGTCTATTCCGGCGCGCTGATCGCCA TGTTCATGGCCACCATCGACATGCAGATCGTCGTCACCGCCTTGCCGACCATTGCCGGCGAACTCGGCAATTTGCATCTG TTCGGCTGGGTCGGCGCCGCCTATCTGCTGTCGACCGCCGCCGTCGCGCCGTTCTACGGCAAACTTGGCGACATGTATGG CCGCAAGAATGTGGTGCTGACGGCGATCGCCTTGTTCCTGCTGGGCTCGCTGGTCTGCGGCATGGCCTGGTCGATGGAAA GCCTGATCGCGGCGCGTGTCCTGCAAGGCATCGGCGGCGGCGGCCTGATGGTCTCGGCCTTTGCCATGATCGGCGAACTG TTCGGGCCGCGCGACCGCGCCAAATACCAGGGCTACAGCTCGGCGGTGTTCGCGCTGTCGTCGGTCCTCGGCCCGTTGGC CGGCGGCTATATCACCAGCCTGTTCGGCTGGCGCTGGGTGTTTTTGGTCAACCTGCCGATTGGCATCGTCGTGCTGGCGA TCCTGGCGTTCGCCATGCGCAGCCGGTTCAACGAGAAGAGGCACAGCATCGACTATCTGGGCGGCTTGCTGCTGGCCATC GGCACCACCGCAATCGTCTATTGGGGCTATCATCTGCTCGACCCCGCCGGACCGGACCTGCTCACCTTCGCGCTGCCGGT CGTCGCGCTGGCGGCAATCGCCTCGTTCATCCTGGTCGAGCGGCGGGCCGAAGAGCCGATCGTGCCCTTGCGGCTGTTCG GCTCCTCGACGGTGCGCATCGTCTCGGGCGTGTCGGTGGTCGCCGGGTCTGTGACGCTTGGCATGTTCTTCTATTTCGCG CTCTACATGCAGACGTTGACCGGGCTCAGTCCGGCCGAAGTCGGCTTCCTGTTCCTGCCGGCTTCCTTGACCTCGATGGT CATCTCGATCGTGGCCGGGCGGGTGATTGCCGCGACCGGCCGCTACAAATGGATGCCGGTGGTGGCGATGGGTATTGGCG GGCTGTTGATGATAGGTTTTGTCTTCATCAATTCGCACACGCCGATCTGGGTTCTGGCGGTGATGATGGGCCTGTTCGGC ATCAGCATGGGCCTGCAGTTCCAGGTGCTGATCGTGGCGATCCAGGCCGCAGCACCCCTGCAGGACATCGGCGCGGTGAC GTCGCTGATCACCCAGGCGCGCACGATCGGCGCATCGCTGGGGCTGGCGCTGAACGGCGCGGTGATGACCTGGGCCCTGA ACCGGCAGACTTCGGAGCTTCCCGCCGATGCCGCCGCCCTGCTGCCGGATGGCCTGACCGGGCTGAACCCGCATCTGGCG TCAAGCCTGCCGGCCGCGATCCGCGACGTGGTGCTCGCCCACTATTCGAGTGGTTTCAACGTGATGTTCATCTGGGTGGC GGCGCTTTACTTCGTTGCCATGGCGCTGACGCTTCTGCTGGAGGATATCCAGATCCCGAAGCGGGGCTGA
Upstream 100 bases:
>100_bases AAATCGGTCGGGCTTGTCCGGCCTGGTATCGTCGCTGCTCATGTCACAGCGCGCTAGCAAAAATATATGTCGGTGTCAAT TGCATGCTGATAGCATATAT
Downstream 100 bases:
>100_bases GCCGAGCATCCCCGGTGGTGACTTTACCGTCTCCAACCATGCGGTCGCAGTTGGTGAATCCGACGAAGACCTTTGCATTC AGACGACAGTATAAGGGGTC
Product: efflux transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MILTYICCGHINRPRTSETPMSIDSTLPDAPPAESGAKPDITTLVVYSGALIAMFMATIDMQIVVTALPTIAGELGNLHL FGWVGAAYLLSTAAVAPFYGKLGDMYGRKNVVLTAIALFLLGSLVCGMAWSMESLIAARVLQGIGGGGLMVSAFAMIGEL FGPRDRAKYQGYSSAVFALSSVLGPLAGGYITSLFGWRWVFLVNLPIGIVVLAILAFAMRSRFNEKRHSIDYLGGLLLAI GTTAIVYWGYHLLDPAGPDLLTFALPVVALAAIASFILVERRAEEPIVPLRLFGSSTVRIVSGVSVVAGSVTLGMFFYFA LYMQTLTGLSPAEVGFLFLPASLTSMVISIVAGRVIAATGRYKWMPVVAMGIGGLLMIGFVFINSHTPIWVLAVMMGLFG ISMGLQFQVLIVAIQAAAPLQDIGAVTSLITQARTIGASLGLALNGAVMTWALNRQTSELPADAAALLPDGLTGLNPHLA SSLPAAIRDVVLAHYSSGFNVMFIWVAALYFVAMALTLLLEDIQIPKRG
Sequences:
>Translated_529_residues MILTYICCGHINRPRTSETPMSIDSTLPDAPPAESGAKPDITTLVVYSGALIAMFMATIDMQIVVTALPTIAGELGNLHL FGWVGAAYLLSTAAVAPFYGKLGDMYGRKNVVLTAIALFLLGSLVCGMAWSMESLIAARVLQGIGGGGLMVSAFAMIGEL FGPRDRAKYQGYSSAVFALSSVLGPLAGGYITSLFGWRWVFLVNLPIGIVVLAILAFAMRSRFNEKRHSIDYLGGLLLAI GTTAIVYWGYHLLDPAGPDLLTFALPVVALAAIASFILVERRAEEPIVPLRLFGSSTVRIVSGVSVVAGSVTLGMFFYFA LYMQTLTGLSPAEVGFLFLPASLTSMVISIVAGRVIAATGRYKWMPVVAMGIGGLLMIGFVFINSHTPIWVLAVMMGLFG ISMGLQFQVLIVAIQAAAPLQDIGAVTSLITQARTIGASLGLALNGAVMTWALNRQTSELPADAAALLPDGLTGLNPHLA SSLPAAIRDVVLAHYSSGFNVMFIWVAALYFVAMALTLLLEDIQIPKRG >Mature_529_residues MILTYICCGHINRPRTSETPMSIDSTLPDAPPAESGAKPDITTLVVYSGALIAMFMATIDMQIVVTALPTIAGELGNLHL FGWVGAAYLLSTAAVAPFYGKLGDMYGRKNVVLTAIALFLLGSLVCGMAWSMESLIAARVLQGIGGGGLMVSAFAMIGEL FGPRDRAKYQGYSSAVFALSSVLGPLAGGYITSLFGWRWVFLVNLPIGIVVLAILAFAMRSRFNEKRHSIDYLGGLLLAI GTTAIVYWGYHLLDPAGPDLLTFALPVVALAAIASFILVERRAEEPIVPLRLFGSSTVRIVSGVSVVAGSVTLGMFFYFA LYMQTLTGLSPAEVGFLFLPASLTSMVISIVAGRVIAATGRYKWMPVVAMGIGGLLMIGFVFINSHTPIWVLAVMMGLFG ISMGLQFQVLIVAIQAAAPLQDIGAVTSLITQARTIGASLGLALNGAVMTWALNRQTSELPADAAALLPDGLTGLNPHLA SSLPAAIRDVVLAHYSSGFNVMFIWVAALYFVAMALTLLLEDIQIPKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=407, Percent_Identity=27.027027027027, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87081983, Length=406, Percent_Identity=27.8325123152709, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789042, Length=320, Percent_Identity=30, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1788710, Length=317, Percent_Identity=29.3375394321767, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788392, Length=403, Percent_Identity=28.7841191066998, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1790146, Length=185, Percent_Identity=32.972972972973, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323735, Length=319, Percent_Identity=30.7210031347962, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6319770, Length=481, Percent_Identity=23.7006237006237, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6322958, Length=464, Percent_Identity=24.3534482758621, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6321663, Length=201, Percent_Identity=32.3383084577114, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6325455, Length=166, Percent_Identity=33.7349397590361, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6319783, Length=384, Percent_Identity=22.9166666666667, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324954, Length=402, Percent_Identity=22.1393034825871, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 - InterPro: IPR011991 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 55989; Mature: 55989
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTYICCGHINRPRTSETPMSIDSTLPDAPPAESGAKPDITTLVVYSGALIAMFMATID CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MQIVVTALPTIAGELGNLHLFGWVGAAYLLSTAAVAPFYGKLGDMYGRKNVVLTAIALFL HHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LGSLVCGMAWSMESLIAARVLQGIGGGGLMVSAFAMIGELFGPRDRAKYQGYSSAVFALS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH SVLGPLAGGYITSLFGWRWVFLVNLPIGIVVLAILAFAMRSRFNEKRHSIDYLGGLLLAI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTTAIVYWGYHLLDPAGPDLLTFALPVVALAAIASFILVERRAEEPIVPLRLFGSSTVRI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH VSGVSVVAGSVTLGMFFYFALYMQTLTGLSPAEVGFLFLPASLTSMVISIVAGRVIAATG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEHHHHHHHHHHHHHCHHHEECC RYKWMPVVAMGIGGLLMIGFVFINSHTPIWVLAVMMGLFGISMGLQFQVLIVAIQAAAPL CCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH QDIGAVTSLITQARTIGASLGLALNGAVMTWALNRQTSELPADAAALLPDGLTGLNPHLA HHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHH SSLPAAIRDVVLAHYSSGFNVMFIWVAALYFVAMALTLLLEDIQIPKRG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MILTYICCGHINRPRTSETPMSIDSTLPDAPPAESGAKPDITTLVVYSGALIAMFMATID CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MQIVVTALPTIAGELGNLHLFGWVGAAYLLSTAAVAPFYGKLGDMYGRKNVVLTAIALFL HHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LGSLVCGMAWSMESLIAARVLQGIGGGGLMVSAFAMIGELFGPRDRAKYQGYSSAVFALS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH SVLGPLAGGYITSLFGWRWVFLVNLPIGIVVLAILAFAMRSRFNEKRHSIDYLGGLLLAI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTTAIVYWGYHLLDPAGPDLLTFALPVVALAAIASFILVERRAEEPIVPLRLFGSSTVRI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH VSGVSVVAGSVTLGMFFYFALYMQTLTGLSPAEVGFLFLPASLTSMVISIVAGRVIAATG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEHHHHHHHHHHHHHCHHHEECC RYKWMPVVAMGIGGLLMIGFVFINSHTPIWVLAVMMGLFGISMGLQFQVLIVAIQAAAPL CCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH QDIGAVTSLITQARTIGASLGLALNGAVMTWALNRQTSELPADAAALLPDGLTGLNPHLA HHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHH SSLPAAIRDVVLAHYSSGFNVMFIWVAALYFVAMALTLLLEDIQIPKRG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]