| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475695
Identifier: 13475695
GI number: 13475695
Start: 5619046
End: 5619303
Strand: Reverse
Name: 13475695
Synonym: msl6830
Alternate gene names: NA
Gene position: 5619303-5619046 (Counterclockwise)
Preceding gene: 13475696
Following gene: 13475694
Centisome position: 79.86
GC content: 65.5
Gene sequence:
>258_bases ATGGCTCGCCTTGCCCGCATCGTCGTTCCCGGTCTGCCGCATCACGTGACGCAACGCGGCAACAGGCGGGCCAAGGTGTT CTTCACGCCCGAGGACTACGCGCTCTACAAGACCCTGCTGGCCGAGCATTGCCGTGCCGCCAATGTCGGCATCTGGGCAT GGTGCCTGATGCCGAACCATGTGCATTTGATCCTGACGCCGGCCGATCCCGGCGGCCTGCGCCGCGCACTCGCCAAGGTG CACCGCGAATTACGGTGA
Upstream 100 bases:
>100_bases ATAAATTACGACGAGAGTGCACTATTTGAATGCGGAAATTACGGTGACAGTGCACTTTTTACCCTGTTCGTCTGGCTATC GCCGCGCGTAGATCGACCGC
Downstream 100 bases:
>100_bases CAGTGCATTTATTGCCAGACCGTCTCGACCACCTGAGCCGCTAAAGCCACGCCGCCTCTGTAGTCCAAAGCAGTGCCGGA CGAGACCAATCTGCTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Transposase Family Protein
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MARLARIVVPGLPHHVTQRGNRRAKVFFTPEDYALYKTLLAEHCRAANVGIWAWCLMPNHVHLILTPADPGGLRRALAKV HRELR
Sequences:
>Translated_85_residues MARLARIVVPGLPHHVTQRGNRRAKVFFTPEDYALYKTLLAEHCRAANVGIWAWCLMPNHVHLILTPADPGGLRRALAKV HRELR >Mature_84_residues ARLARIVVPGLPHHVTQRGNRRAKVFFTPEDYALYKTLLAEHCRAANVGIWAWCLMPNHVHLILTPADPGGLRRALAKVH RELR
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9670; Mature: 9538
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLARIVVPGLPHHVTQRGNRRAKVFFTPEDYALYKTLLAEHCRAANVGIWAWCLMPNH CCCCHHHHCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC VHLILTPADPGGLRRALAKVHRELR EEEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure ARLARIVVPGLPHHVTQRGNRRAKVFFTPEDYALYKTLLAEHCRAANVGIWAWCLMPNH CCCHHHHCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC VHLILTPADPGGLRRALAKVHRELR EEEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA