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The map label for this gene is 13475682

Identifier: 13475682

GI number: 13475682

Start: 5605576

End: 5606616

Strand: Direct

Name: 13475682

Synonym: mlr6810

Alternate gene names: NA

Gene position: 5605576-5606616 (Clockwise)

Preceding gene: 13475680

Following gene: 13475683

Centisome position: 79.67

GC content: 64.75

Gene sequence:

>1041_bases
ATGCGCAGCAAAACCAGCATTCGTGTCGTCGGCTGCCATGCCGAAGGTGAAGTCGGCGATGTCATCATCGGCGGTGTCCT
GCCGCCGGCTGGCCGCACGATGATGGACAAGATGATCACGATGGAGCGCGATCATGACCATATCAGGCGCATGCTGATCT
GCGAGCCGCGCGGCAGCGTCGCGCGCCACGTGAACCTGCTCGTTCCCTCGACGCGGGAGGATTGCGCCGCCGGCGCCATC
ATCATGGAGCCGACGGAATATCCGCCGATGTCCGGTTCCAACACGATCTGCGTCGCCACGGTGCTGCTGGAGACCGGCAT
GGTACCGATGCAGGAGCCCGAGACACGCTTCAAGCTCGATATGCCGGGTGGCGTCATCGAGGTGCGCGCGCAATGCCGCG
ACGGCAAATGCGTCTCGATCACCTTGCGCAACGCACCGGCCTTTGTTGACCGCCTCGATGCCAGCATCGAGGTCGAGGGG
CTGGGCACGCTCACCGTCGACATCGCCTACGGCGGCATGTTCTACGCCATCGTCGATGCCAAGGCGCTCGGCTTCTCGAT
CGCTCCCGACGAAGCGCGCGAGCTGGCGGTGGCCGGCGAGAAGATCAGGCGGGCCGCGCGCGAGCAGCTCGATGTCGTCC
ATCCGCAATTCGATCATGTGCGCGGCGTGTCGATCGTCCAGTTCGCCATGCCGTTCCAGGGGCCGGGCAATGTCACGCGC
AACACCTGCATCGTCTCGCCGGGCCGCTCCGACCGCAGCCCGACCGGAACGGGTACATCGGCCCGCATGGCCGTGCTGCA
GGCACGCGGCTTGATGGGTGTTGGCGACGTGTTGATCCATGAATCGATCATCGGCTCGCGCTTCACGGGCAGGATCGTGG
AGCTGGCCGAAATCGCAGGACGCAAGGCGATCGTTCCGGAGATCACCGGCCGGGCCTGGATTACCGGCGAGCACAGCTAC
TATCTCGATCCGACGGATCCATACCCTCAAGGCTACGTGCTGTCGGATACCTGGGGCACCTCCACCTCGGTGAAGCAGTA
G

Upstream 100 bases:

>100_bases
CTCCTTGAGGCTTGCACGCGGATTGATCAGTTTGTCCCGAAGCGGCACGGCTTGCCAAGCAAAATAGTCGTGGCCGCGAG
GGACCAACGCAGGAACAGCA

Downstream 100 bases:

>100_bases
GCCTGAGCCGGCCCATCGATTGCCTTGGTGCCATGATTTTCGGGTCGCATCATGTGGGCGACGATCTTGAATGTCGGCAA
TTCGCTGGACTGCTGGGTTC

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRSKTSIRVVGCHAEGEVGDVIIGGVLPPAGRTMMDKMITMERDHDHIRRMLICEPRGSVARHVNLLVPSTREDCAAGAI
IMEPTEYPPMSGSNTICVATVLLETGMVPMQEPETRFKLDMPGGVIEVRAQCRDGKCVSITLRNAPAFVDRLDASIEVEG
LGTLTVDIAYGGMFYAIVDAKALGFSIAPDEARELAVAGEKIRRAAREQLDVVHPQFDHVRGVSIVQFAMPFQGPGNVTR
NTCIVSPGRSDRSPTGTGTSARMAVLQARGLMGVGDVLIHESIIGSRFTGRIVELAEIAGRKAIVPEITGRAWITGEHSY
YLDPTDPYPQGYVLSDTWGTSTSVKQ

Sequences:

>Translated_346_residues
MRSKTSIRVVGCHAEGEVGDVIIGGVLPPAGRTMMDKMITMERDHDHIRRMLICEPRGSVARHVNLLVPSTREDCAAGAI
IMEPTEYPPMSGSNTICVATVLLETGMVPMQEPETRFKLDMPGGVIEVRAQCRDGKCVSITLRNAPAFVDRLDASIEVEG
LGTLTVDIAYGGMFYAIVDAKALGFSIAPDEARELAVAGEKIRRAAREQLDVVHPQFDHVRGVSIVQFAMPFQGPGNVTR
NTCIVSPGRSDRSPTGTGTSARMAVLQARGLMGVGDVLIHESIIGSRFTGRIVELAEIAGRKAIVPEITGRAWITGEHSY
YLDPTDPYPQGYVLSDTWGTSTSVKQ
>Mature_346_residues
MRSKTSIRVVGCHAEGEVGDVIIGGVLPPAGRTMMDKMITMERDHDHIRRMLICEPRGSVARHVNLLVPSTREDCAAGAI
IMEPTEYPPMSGSNTICVATVLLETGMVPMQEPETRFKLDMPGGVIEVRAQCRDGKCVSITLRNAPAFVDRLDASIEVEG
LGTLTVDIAYGGMFYAIVDAKALGFSIAPDEARELAVAGEKIRRAAREQLDVVHPQFDHVRGVSIVQFAMPFQGPGNVTR
NTCIVSPGRSDRSPTGTGTSARMAVLQARGLMGVGDVLIHESIIGSRFTGRIVELAEIAGRKAIVPEITGRAWITGEHSY
YLDPTDPYPQGYVLSDTWGTSTSVKQ

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=338, Percent_Identity=31.0650887573964, Blast_Score=166, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 37390; Mature: 37390

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKTSIRVVGCHAEGEVGDVIIGGVLPPAGRTMMDKMITMERDHDHIRRMLICEPRGSV
CCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCC
ARHVNLLVPSTREDCAAGAIIMEPTEYPPMSGSNTICVATVLLETGMVPMQEPETRFKLD
EEEEEEEECCCCHHHHCCEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCEEEEE
MPGGVIEVRAQCRDGKCVSITLRNAPAFVDRLDASIEVEGLGTLTVDIAYGGMFYAIVDA
CCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCEEEEEECEEEEEEEEECCEEEEEEEH
KALGFSIAPDEARELAVAGEKIRRAAREQLDVVHPQFDHVRGVSIVQFAMPFQGPGNVTR
HHHCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCC
NTCIVSPGRSDRSPTGTGTSARMAVLQARGLMGVGDVLIHESIIGSRFTGRIVELAEIAG
CEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
RKAIVPEITGRAWITGEHSYYLDPTDPYPQGYVLSDTWGTSTSVKQ
CCEECCCCCCCEEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MRSKTSIRVVGCHAEGEVGDVIIGGVLPPAGRTMMDKMITMERDHDHIRRMLICEPRGSV
CCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCC
ARHVNLLVPSTREDCAAGAIIMEPTEYPPMSGSNTICVATVLLETGMVPMQEPETRFKLD
EEEEEEEECCCCHHHHCCEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCEEEEE
MPGGVIEVRAQCRDGKCVSITLRNAPAFVDRLDASIEVEGLGTLTVDIAYGGMFYAIVDA
CCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCEEEEEECEEEEEEEEECCEEEEEEEH
KALGFSIAPDEARELAVAGEKIRRAAREQLDVVHPQFDHVRGVSIVQFAMPFQGPGNVTR
HHHCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCC
NTCIVSPGRSDRSPTGTGTSARMAVLQARGLMGVGDVLIHESIIGSRFTGRIVELAEIAG
CEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
RKAIVPEITGRAWITGEHSYYLDPTDPYPQGYVLSDTWGTSTSVKQ
CCEECCCCCCCEEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]