| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475648
Identifier: 13475648
GI number: 13475648
Start: 5567660
End: 5568943
Strand: Direct
Name: 13475648
Synonym: mlr6768
Alternate gene names: NA
Gene position: 5567660-5568943 (Clockwise)
Preceding gene: 13475647
Following gene: 13475649
Centisome position: 79.13
GC content: 59.19
Gene sequence:
>1284_bases ATGACCCCGTTCCGCCGGCATATGTTTGCGCTGTTGCTGATTGCCGGTGCCATGTTCCCGAATATCTTTATGGCCGGTAG TCGCGAAAGCAGCGCATCGCAACCGTCGCCCGCACAAACGGCAAAAAACCTGCCGGGCTATCTGCGCGAAGCAACGGATT CCTGGTCCGGCACGACTTTCTTACGGATCACCGAACCTGGAATTCTTGGCCTGGCGGGTGTCTGCGGGAAGAAATACTGC ACCCACCGTTACTCGAGTGCACAGGCCTGGAATGCTGACCAGAGCCTTCTCGTGATCGTCAATGGTTGTGGTGGCATGTG CTTTCTCGACGGGCACAGCTACGTGCCATTGTTCCACCGCGACCGCTCGACTGAAACTGAATGCGAATGGCATCCCAGGG ATGCCCAGCTGATGATCTGCGTTGCTGGCCGGCAGATTTATACCTGGGCGCCGCGCACAAATCATGAGGATGTCGTGTTC GACACGGCAGCCTACAGCAAACTTCAGTTCGGGCCCTACAAAGGCAATCCGAGCCGCGACGGCAACCGCATTGCGGTGCG TGCAACGCGCAATGACGGCAAAGCGGTTGTCTTCGGCTACGACCTCAAGGAGCGGCGGAAATTCCCGGATATCGATCTTG CCCAGCTTCCGGGAACCACCGGCTCCTGCTCGATCTCTCCGCTCGGAATCAATATTGTGTGCTCACAGGCATTGTCGGAG GACCATGAACCGACCTTCGTCTTTTCCATCGACGGCGTCTTGCAACAGAAGTGGATGGAGCACCACCGGCCCGGTCACGG CGACATGACGGTCGATGCCGACGGCAGCGAAATCTACGTCGGGATCAGCAAATCGGATCCCGACATATATCAGGTGATCA AGCGCCGGTTGGCCGACGGCAAGGTCACCTCGCTGATGAAATATGGCGAGGCCATGCATGCGTCGCTGAGGTCCCTGGAC AGGCCCGGCTGGGTGTTTCTGAGCTATGGCGGGACGCCAGCCGAAGTATCGCAGCACCCGGACTGGGCGCCTTACGCGCA GCAGGTCATTGCGGTGCGCACGGACGGCAGCGGCGAGGTCCGCCGTATCGTGGAAACGCAGAACGTCCACTTCGACTACT GGAACGAGACGCATGCCTCGCCCTCGCCAGACGGCTCACAGGTAATCTGGTCGAGCAATTGGGGTGTGCCCGGGGGGCCG GTATACGATTTTGTTACCCGTGTTGAATGGCCTTCGGAGCCGGTGCCGAACCAGAAGGAGATTGTCGCAAATGGCCTTCA GTAA
Upstream 100 bases:
>100_bases GGGCGCAGACAAGCCTGCGCGATGGACTGGAGCGAACGATCGCATGGTGGCGCGCGCGCCTTAGTGAAGGCCGGGTACGG CGCGAAATGGGTTATATGAC
Downstream 100 bases:
>100_bases ACGAACCGTTCTTGCCGCGGTTGCGGTGATGTCCCTGACATCGATGGCCGCCGCAGGCGAAGCCGAACCCTATCAACTGT CACCTGGCGATACCGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTPFRRHMFALLLIAGAMFPNIFMAGSRESSASQPSPAQTAKNLPGYLREATDSWSGTTFLRITEPGILGLAGVCGKKYC THRYSSAQAWNADQSLLVIVNGCGGMCFLDGHSYVPLFHRDRSTETECEWHPRDAQLMICVAGRQIYTWAPRTNHEDVVF DTAAYSKLQFGPYKGNPSRDGNRIAVRATRNDGKAVVFGYDLKERRKFPDIDLAQLPGTTGSCSISPLGINIVCSQALSE DHEPTFVFSIDGVLQQKWMEHHRPGHGDMTVDADGSEIYVGISKSDPDIYQVIKRRLADGKVTSLMKYGEAMHASLRSLD RPGWVFLSYGGTPAEVSQHPDWAPYAQQVIAVRTDGSGEVRRIVETQNVHFDYWNETHASPSPDGSQVIWSSNWGVPGGP VYDFVTRVEWPSEPVPNQKEIVANGLQ
Sequences:
>Translated_427_residues MTPFRRHMFALLLIAGAMFPNIFMAGSRESSASQPSPAQTAKNLPGYLREATDSWSGTTFLRITEPGILGLAGVCGKKYC THRYSSAQAWNADQSLLVIVNGCGGMCFLDGHSYVPLFHRDRSTETECEWHPRDAQLMICVAGRQIYTWAPRTNHEDVVF DTAAYSKLQFGPYKGNPSRDGNRIAVRATRNDGKAVVFGYDLKERRKFPDIDLAQLPGTTGSCSISPLGINIVCSQALSE DHEPTFVFSIDGVLQQKWMEHHRPGHGDMTVDADGSEIYVGISKSDPDIYQVIKRRLADGKVTSLMKYGEAMHASLRSLD RPGWVFLSYGGTPAEVSQHPDWAPYAQQVIAVRTDGSGEVRRIVETQNVHFDYWNETHASPSPDGSQVIWSSNWGVPGGP VYDFVTRVEWPSEPVPNQKEIVANGLQ >Mature_426_residues TPFRRHMFALLLIAGAMFPNIFMAGSRESSASQPSPAQTAKNLPGYLREATDSWSGTTFLRITEPGILGLAGVCGKKYCT HRYSSAQAWNADQSLLVIVNGCGGMCFLDGHSYVPLFHRDRSTETECEWHPRDAQLMICVAGRQIYTWAPRTNHEDVVFD TAAYSKLQFGPYKGNPSRDGNRIAVRATRNDGKAVVFGYDLKERRKFPDIDLAQLPGTTGSCSISPLGINIVCSQALSED HEPTFVFSIDGVLQQKWMEHHRPGHGDMTVDADGSEIYVGISKSDPDIYQVIKRRLADGKVTSLMKYGEAMHASLRSLDR PGWVFLSYGGTPAEVSQHPDWAPYAQQVIAVRTDGSGEVRRIVETQNVHFDYWNETHASPSPDGSQVIWSSNWGVPGGPV YDFVTRVEWPSEPVPNQKEIVANGLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47315; Mature: 47183
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFRRHMFALLLIAGAMFPNIFMAGSRESSASQPSPAQTAKNLPGYLREATDSWSGTTF CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCEEE LRITEPGILGLAGVCGKKYCTHRYSSAQAWNADQSLLVIVNGCGGMCFLDGHSYVPLFHR EEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEEC DRSTETECEWHPRDAQLMICVAGRQIYTWAPRTNHEDVVFDTAAYSKLQFGPYKGNPSRD CCCCCCCCEECCCCCEEEEEEECCEEEEECCCCCCCCEEEECCHHCEEECCCCCCCCCCC GNRIAVRATRNDGKAVVFGYDLKERRKFPDIDLAQLPGTTGSCSISPLGINIVCSQALSE CCEEEEEEECCCCCEEEEECCHHHHCCCCCCCHHHCCCCCCCCEEEECCEEEEEEHHHCC DHEPTFVFSIDGVLQQKWMEHHRPGHGDMTVDADGSEIYVGISKSDPDIYQVIKRRLADG CCCCEEEEEECHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCC KVTSLMKYGEAMHASLRSLDRPGWVFLSYGGTPAEVSQHPDWAPYAQQVIAVRTDGSGEV HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCHHCEEEEEEECCCCCE RRIVETQNVHFDYWNETHASPSPDGSQVIWSSNWGVPGGPVYDFVTRVEWPSEPVPNQKE EEEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHH IVANGLQ HHCCCCC >Mature Secondary Structure TPFRRHMFALLLIAGAMFPNIFMAGSRESSASQPSPAQTAKNLPGYLREATDSWSGTTF CCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCEEE LRITEPGILGLAGVCGKKYCTHRYSSAQAWNADQSLLVIVNGCGGMCFLDGHSYVPLFHR EEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEEC DRSTETECEWHPRDAQLMICVAGRQIYTWAPRTNHEDVVFDTAAYSKLQFGPYKGNPSRD CCCCCCCCEECCCCCEEEEEEECCEEEEECCCCCCCCEEEECCHHCEEECCCCCCCCCCC GNRIAVRATRNDGKAVVFGYDLKERRKFPDIDLAQLPGTTGSCSISPLGINIVCSQALSE CCEEEEEEECCCCCEEEEECCHHHHCCCCCCCHHHCCCCCCCCEEEECCEEEEEEHHHCC DHEPTFVFSIDGVLQQKWMEHHRPGHGDMTVDADGSEIYVGISKSDPDIYQVIKRRLADG CCCCEEEEEECHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCC KVTSLMKYGEAMHASLRSLDRPGWVFLSYGGTPAEVSQHPDWAPYAQQVIAVRTDGSGEV HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCHHCEEEEEEECCCCCE RRIVETQNVHFDYWNETHASPSPDGSQVIWSSNWGVPGGPVYDFVTRVEWPSEPVPNQKE EEEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHH IVANGLQ HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA