| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is feaR [C]
Identifier: 13475611
GI number: 13475611
Start: 5519032
End: 5520159
Strand: Direct
Name: feaR [C]
Synonym: mlr6727
Alternate gene names: 13475611
Gene position: 5519032-5520159 (Clockwise)
Preceding gene: 13475610
Following gene: 13475618
Centisome position: 78.44
GC content: 61.35
Gene sequence:
>1128_bases GTGGCGAACGCGGCTCCGGCAGGATGGAACGCGCATGCGATCCTCGAACCCCCGGCTAACCCCGCCGCCGAGCCAACATT GGTCGTTCCGGAACAAACTCCAATTCCCTGCTTCGAATTCTCGACCGGCGATTTGCCTCCGAAGGATCAGTTTGCGGCGT GGCGTCAGAGCTTTGCGACCATGCTCGACTTTGTCGAGCCGGGCGATACGGAGGCCGGTTTCGCCGGCACGCAGGTCATC TGGGATCTGGGCGATCTTGCTTTGGCTCAGGTCAGCACCAATGGTTTGGACTTCACCAGTCTGGCGGGTCACGTTCGCCG TGATCCTGTCGATCATTGGTTGGTGACCCTCATCCAGGACGGCAGATCGCAGACGATCACTCCCTCCAAGTCTTTCGACG GGGACGCCGGATCGGTGCAGGTGCATCCGCTTGGCCGGGTCTTCGAGGGAAGCGTTACAGACAGCGAAATGCTGCTGCTG TTCGTACCCCGCGACTTCTGCCGTGACATGAGTTGGGGTCTCGCCGCGGCCGAGTTCTCCGTCCTTCGTGGAGGCATGGG ACCGCTGCTAGCCGACTATCTGGCCAGTCTCGTCCAGCGGCTTCCCACGATGGGTGTCAATGATCTTCCGGGCTTGCTCA GTGCGACCCGAGCGATGCTCCAGGTTTGCATCGCACCATCTCCTGATCATCTCACCGAAGCTCATGACCCGATTTCGGCT ACCTTGCTCGAGCGCGCCCGTCGATTCGTGCAGCACCATCTTTTCCAGCCCGATCTGTCTATCGAGCAAATGACGCGCGA ACTCGGGATATCGCGTTCCCGGCTCTACCGGCTTTTTGAGGCTTCCGGAGGAATCGTGCACTACATCCAGCATCGGCGCC TCCTGGCAGCCCATGCAGCGCTCGCGGATCCGAATGACCGCCGTCGAATTCTGGACATTGCCGACGAATACGGCTTCGGT GATGGCGCGGAATTCAGCCGCGCATTCAGGCGCGAGTTCGGGTACTGCCCGAGCGAAGTGAGAACTGGCGTCAAAAACGG CCCATCGCATTGGCACATGGACGAGGTGGAAACCGCCGCCCCCGGCCTGCGGTTGGGCCAGCTCCTTCGGCGACTGCAGG CGCAATGA
Upstream 100 bases:
>100_bases GGTTTTCTAATGGCTCAGATCGAGATCTCGTCTCGCTCTACCGCCTTCTCACCCTGTGCCCGCTTTGTGCGCCGTCGAGG ATCCTGTCGTGACCTCGCAC
Downstream 100 bases:
>100_bases CCAGGCATGGTCGATATCGCTGAAGTCCGGCTGGGAATTCGGGCCAATCCCGTCAGCCTGTGAATCCGCGGATCCGCAGC AATCAAAATCACCAGCGGAC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Protein; Transcription Regulator Protein; Transcriptional Regulator Arac Family; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Helix-Turn-Helix AraC Type; Transcriptional Regulator AraC Family Protein; AraC Domain-Containing Protein; Transcriptional Regulator Transcription Regulator Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MANAAPAGWNAHAILEPPANPAAEPTLVVPEQTPIPCFEFSTGDLPPKDQFAAWRQSFATMLDFVEPGDTEAGFAGTQVI WDLGDLALAQVSTNGLDFTSLAGHVRRDPVDHWLVTLIQDGRSQTITPSKSFDGDAGSVQVHPLGRVFEGSVTDSEMLLL FVPRDFCRDMSWGLAAAEFSVLRGGMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQVCIAPSPDHLTEAHDPISA TLLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEASGGIVHYIQHRRLLAAHAALADPNDRRRILDIADEYGFG DGAEFSRAFRREFGYCPSEVRTGVKNGPSHWHMDEVETAAPGLRLGQLLRRLQAQ
Sequences:
>Translated_375_residues MANAAPAGWNAHAILEPPANPAAEPTLVVPEQTPIPCFEFSTGDLPPKDQFAAWRQSFATMLDFVEPGDTEAGFAGTQVI WDLGDLALAQVSTNGLDFTSLAGHVRRDPVDHWLVTLIQDGRSQTITPSKSFDGDAGSVQVHPLGRVFEGSVTDSEMLLL FVPRDFCRDMSWGLAAAEFSVLRGGMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQVCIAPSPDHLTEAHDPISA TLLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEASGGIVHYIQHRRLLAAHAALADPNDRRRILDIADEYGFG DGAEFSRAFRREFGYCPSEVRTGVKNGPSHWHMDEVETAAPGLRLGQLLRRLQAQ >Mature_374_residues ANAAPAGWNAHAILEPPANPAAEPTLVVPEQTPIPCFEFSTGDLPPKDQFAAWRQSFATMLDFVEPGDTEAGFAGTQVIW DLGDLALAQVSTNGLDFTSLAGHVRRDPVDHWLVTLIQDGRSQTITPSKSFDGDAGSVQVHPLGRVFEGSVTDSEMLLLF VPRDFCRDMSWGLAAAEFSVLRGGMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQVCIAPSPDHLTEAHDPISAT LLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEASGGIVHYIQHRRLLAAHAALADPNDRRRILDIADEYGFGD GAEFSRAFRREFGYCPSEVRTGVKNGPSHWHMDEVETAAPGLRLGQLLRRLQAQ
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41182; Mature: 41051
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAAPAGWNAHAILEPPANPAAEPTLVVPEQTPIPCFEFSTGDLPPKDQFAAWRQSFAT CCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH MLDFVEPGDTEAGFAGTQVIWDLGDLALAQVSTNGLDFTSLAGHVRRDPVDHWLVTLIQD HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHC GRSQTITPSKSFDGDAGSVQVHPLGRVFEGSVTDSEMLLLFVPRDFCRDMSWGLAAAEFS CCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHH VLRGGMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQVCIAPSPDHLTEAHDPISA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH TLLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEASGGIVHYIQHRRLLAAHAA HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHH LADPNDRRRILDIADEYGFGDGAEFSRAFRREFGYCPSEVRTGVKNGPSHWHMDEVETAA HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHC PGLRLGQLLRRLQAQ CCHHHHHHHHHHHCC >Mature Secondary Structure ANAAPAGWNAHAILEPPANPAAEPTLVVPEQTPIPCFEFSTGDLPPKDQFAAWRQSFAT CCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH MLDFVEPGDTEAGFAGTQVIWDLGDLALAQVSTNGLDFTSLAGHVRRDPVDHWLVTLIQD HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHC GRSQTITPSKSFDGDAGSVQVHPLGRVFEGSVTDSEMLLLFVPRDFCRDMSWGLAAAEFS CCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHH VLRGGMGPLLADYLASLVQRLPTMGVNDLPGLLSATRAMLQVCIAPSPDHLTEAHDPISA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH TLLERARRFVQHHLFQPDLSIEQMTRELGISRSRLYRLFEASGGIVHYIQHRRLLAAHAA HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHH LADPNDRRRILDIADEYGFGDGAEFSRAFRREFGYCPSEVRTGVKNGPSHWHMDEVETAA HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHC PGLRLGQLLRRLQAQ CCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA