Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475551

Identifier: 13475551

GI number: 13475551

Start: 5448148

End: 5449407

Strand: Direct

Name: 13475551

Synonym: mlr6651

Alternate gene names: NA

Gene position: 5448148-5449407 (Clockwise)

Preceding gene: 229259632

Following gene: 13475552

Centisome position: 77.43

GC content: 57.3

Gene sequence:

>1260_bases
ATGACGATGACTGAACTCAAGAAAATTCTGTTGGCCACGACGCTCGGCCTGTCCTTTGCGGGTCAGGCAACCGCCCAAAC
CAAGATCGAGGGCCTGCATGTATGGACCTCGGCAAGCGAGGTCGGCGCGCTGAAGGTGCTCACCGACAAACTCAAGACCA
TGGGTTTCGAATGGCAGGACAGCGCGGTCGGCGGCGCCAATGGCGCCAACGCCCAGCAGGCGCTGCGCACCCGTGTTGCC
GCCGGCAACCCGCCTGCTGTGATGCAGTTCCTTGGCTTTGAAGGACTGGGCTGGGCCAAGGAAGGCGCGTTGCGTTCATT
GAATGATCTGTATGCCAAGAACGGCTGGAAGGCCGACCTGCCGCCGGTCATGCTGCAATTCCTGAGACAGGATGACAGCT
TTTTCTCGACCCCGATCAACATGCATCGTCAGAACTGGGTTTGGGCGAACAAGGCTGTCTTTGACAAGGCAGGAGTCGCC
GTTCCCACGAGCTGGGATGAACTGATTGCAAGTGGTGAAAAGCTGAAAGCGATTGGTGTTACCCCGATCGCGATGAGCGA
TGAAAGTTGGCAGATCGAAGAACTGTTCGAATCGATTTTGATCGATGTCAACGGCCCCGATTTCTACAAGAAAGCCGCAA
TCGATCTTGATGAATCGGCGCTGTCCAGCCCGGAGATGATCAAGACCTTCGAACTTCTGGGCAAGGTGCGTGGATTGCAT
GATGCCGGCTTCACCGGCCGTGACTGGGCGGCAGCGACGAACTTGGTTGCTAACGGCCAGGCTGGCATGCAGATCATGGG
CGACTGGGCGAAGGGCGAATTCCTCGCCAAGGGCATGAAGCCGGGCGTCGACTTTCTGTGCTTCCCGACGCCGACCGCCA
CGCCGAACTACAAATTCGTGTTCGATACATTCGGCGGCTTCAAGATCGACAATGCCGATATTACAAAAGGGCAGGACGCG
GTCGCGGAAGCGATCATGGACCCGGAGGTCCAGAAAAAGTTCAACCTGATCAAGGGTTCGATCCCGGCTCGTCTCGACGT
GGCGATGGACGATTTTGACGACTGCGCCAAGCGCAGCTTTTCAGACCGCGTCGAAGCCATCAAGAATAACGCCATATACG
GATCGCTCACTGACGGCTTTGCCGTCGAGCCGCGCTTCTCCGGCGTGTTCCAGGATGTGGTCGGCAAGTTTTTTGTCACA
GACATGAGTGCGGAAGACGCGGTCAAATCCCTGGTCGACGGCATTAACAACGCACGCTGA

Upstream 100 bases:

>100_bases
GCGAAACGTCGGCTATGCCATGCCGGTCGATCCACGCTGACTGCCACCGCCCGATAACAGCCGAATAGGCGACCGGGCAT
TTCAACATCAACCAAGGGGA

Downstream 100 bases:

>100_bases
GGCGCGCGTTCAGCTGCCGGGGCAATTCCTCCCAGTACTGTCCCGGCAGCGCATTTCCTCGCCGCTCCACTGACCAAACC
ACAGGGCAAGTCGATGAGCA

Product: ABC transporter (substrate-binding protein)

Products: NA

Alternate protein names: Immunogenic 39 kDa protein; P39 [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQDSAVGGANGANAQQALRTRVA
AGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADLPPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVA
VPTSWDELIASGEKLKAIGVTPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH
DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFVFDTFGGFKIDNADITKGQDA
VAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSFSDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVT
DMSAEDAVKSLVDGINNAR

Sequences:

>Translated_419_residues
MTMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQDSAVGGANGANAQQALRTRVA
AGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADLPPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVA
VPTSWDELIASGEKLKAIGVTPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH
DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFVFDTFGGFKIDNADITKGQDA
VAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSFSDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVT
DMSAEDAVKSLVDGINNAR
>Mature_418_residues
TMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQDSAVGGANGANAQQALRTRVAA
GNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADLPPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVAV
PTSWDELIASGEKLKAIGVTPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLHD
AGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFVFDTFGGFKIDNADITKGQDAV
AEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSFSDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVTD
MSAEDAVKSLVDGINNAR

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45512; Mature: 45381

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQD
CCHHHHHHHHHHHHHCCCCCCCCHHHHEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
SAVGGANGANAQQALRTRVAAGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADL
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVAVPTSWDELIASGEKLKAIGV
HHHHHHHHHCCCCCCCCCHHHCCCCEEECCCHHHHCCCCCCCCCHHHHHCCCCCEEEECC
TPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH
CEEEECCCCCCHHHHHHHHEEECCCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCC
DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFV
CCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCEEEE
FDTFGGFKIDNADITKGQDAVAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSF
EECCCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHH
SDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVTDMSAEDAVKSLVDGINNAR
HHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQD
CHHHHHHHHHHHHHCCCCCCCCHHHHEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
SAVGGANGANAQQALRTRVAAGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADL
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVAVPTSWDELIASGEKLKAIGV
HHHHHHHHHCCCCCCCCCHHHCCCCEEECCCHHHHCCCCCCCCCHHHHHCCCCCEEEECC
TPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH
CEEEECCCCCCHHHHHHHHEEECCCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCC
DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFV
CCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCEEEE
FDTFGGFKIDNADITKGQDAVAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSF
EECCCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHH
SDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVTDMSAEDAVKSLVDGINNAR
HHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9009303; 10235622 [H]