| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475551
Identifier: 13475551
GI number: 13475551
Start: 5448148
End: 5449407
Strand: Direct
Name: 13475551
Synonym: mlr6651
Alternate gene names: NA
Gene position: 5448148-5449407 (Clockwise)
Preceding gene: 229259632
Following gene: 13475552
Centisome position: 77.43
GC content: 57.3
Gene sequence:
>1260_bases ATGACGATGACTGAACTCAAGAAAATTCTGTTGGCCACGACGCTCGGCCTGTCCTTTGCGGGTCAGGCAACCGCCCAAAC CAAGATCGAGGGCCTGCATGTATGGACCTCGGCAAGCGAGGTCGGCGCGCTGAAGGTGCTCACCGACAAACTCAAGACCA TGGGTTTCGAATGGCAGGACAGCGCGGTCGGCGGCGCCAATGGCGCCAACGCCCAGCAGGCGCTGCGCACCCGTGTTGCC GCCGGCAACCCGCCTGCTGTGATGCAGTTCCTTGGCTTTGAAGGACTGGGCTGGGCCAAGGAAGGCGCGTTGCGTTCATT GAATGATCTGTATGCCAAGAACGGCTGGAAGGCCGACCTGCCGCCGGTCATGCTGCAATTCCTGAGACAGGATGACAGCT TTTTCTCGACCCCGATCAACATGCATCGTCAGAACTGGGTTTGGGCGAACAAGGCTGTCTTTGACAAGGCAGGAGTCGCC GTTCCCACGAGCTGGGATGAACTGATTGCAAGTGGTGAAAAGCTGAAAGCGATTGGTGTTACCCCGATCGCGATGAGCGA TGAAAGTTGGCAGATCGAAGAACTGTTCGAATCGATTTTGATCGATGTCAACGGCCCCGATTTCTACAAGAAAGCCGCAA TCGATCTTGATGAATCGGCGCTGTCCAGCCCGGAGATGATCAAGACCTTCGAACTTCTGGGCAAGGTGCGTGGATTGCAT GATGCCGGCTTCACCGGCCGTGACTGGGCGGCAGCGACGAACTTGGTTGCTAACGGCCAGGCTGGCATGCAGATCATGGG CGACTGGGCGAAGGGCGAATTCCTCGCCAAGGGCATGAAGCCGGGCGTCGACTTTCTGTGCTTCCCGACGCCGACCGCCA CGCCGAACTACAAATTCGTGTTCGATACATTCGGCGGCTTCAAGATCGACAATGCCGATATTACAAAAGGGCAGGACGCG GTCGCGGAAGCGATCATGGACCCGGAGGTCCAGAAAAAGTTCAACCTGATCAAGGGTTCGATCCCGGCTCGTCTCGACGT GGCGATGGACGATTTTGACGACTGCGCCAAGCGCAGCTTTTCAGACCGCGTCGAAGCCATCAAGAATAACGCCATATACG GATCGCTCACTGACGGCTTTGCCGTCGAGCCGCGCTTCTCCGGCGTGTTCCAGGATGTGGTCGGCAAGTTTTTTGTCACA GACATGAGTGCGGAAGACGCGGTCAAATCCCTGGTCGACGGCATTAACAACGCACGCTGA
Upstream 100 bases:
>100_bases GCGAAACGTCGGCTATGCCATGCCGGTCGATCCACGCTGACTGCCACCGCCCGATAACAGCCGAATAGGCGACCGGGCAT TTCAACATCAACCAAGGGGA
Downstream 100 bases:
>100_bases GGCGCGCGTTCAGCTGCCGGGGCAATTCCTCCCAGTACTGTCCCGGCAGCGCATTTCCTCGCCGCTCCACTGACCAAACC ACAGGGCAAGTCGATGAGCA
Product: ABC transporter (substrate-binding protein)
Products: NA
Alternate protein names: Immunogenic 39 kDa protein; P39 [H]
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQDSAVGGANGANAQQALRTRVA AGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADLPPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVA VPTSWDELIASGEKLKAIGVTPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFVFDTFGGFKIDNADITKGQDA VAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSFSDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVT DMSAEDAVKSLVDGINNAR
Sequences:
>Translated_419_residues MTMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQDSAVGGANGANAQQALRTRVA AGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADLPPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVA VPTSWDELIASGEKLKAIGVTPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFVFDTFGGFKIDNADITKGQDA VAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSFSDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVT DMSAEDAVKSLVDGINNAR >Mature_418_residues TMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQDSAVGGANGANAQQALRTRVAA GNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADLPPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVAV PTSWDELIASGEKLKAIGVTPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLHD AGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFVFDTFGGFKIDNADITKGQDAV AEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSFSDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVTD MSAEDAVKSLVDGINNAR
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 45512; Mature: 45381
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQD CCHHHHHHHHHHHHHCCCCCCCCHHHHEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCC SAVGGANGANAQQALRTRVAAGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADL CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVAVPTSWDELIASGEKLKAIGV HHHHHHHHHCCCCCCCCCHHHCCCCEEECCCHHHHCCCCCCCCCHHHHHCCCCCEEEECC TPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH CEEEECCCCCCHHHHHHHHEEECCCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCC DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFV CCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCEEEE FDTFGGFKIDNADITKGQDAVAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSF EECCCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHH SDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVTDMSAEDAVKSLVDGINNAR HHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TMTELKKILLATTLGLSFAGQATAQTKIEGLHVWTSASEVGALKVLTDKLKTMGFEWQD CHHHHHHHHHHHHHCCCCCCCCHHHHEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCC SAVGGANGANAQQALRTRVAAGNPPAVMQFLGFEGLGWAKEGALRSLNDLYAKNGWKADL CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PPVMLQFLRQDDSFFSTPINMHRQNWVWANKAVFDKAGVAVPTSWDELIASGEKLKAIGV HHHHHHHHHCCCCCCCCCHHHCCCCEEECCCHHHHCCCCCCCCCHHHHHCCCCCEEEECC TPIAMSDESWQIEELFESILIDVNGPDFYKKAAIDLDESALSSPEMIKTFELLGKVRGLH CEEEECCCCCCHHHHHHHHEEECCCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCC DAGFTGRDWAAATNLVANGQAGMQIMGDWAKGEFLAKGMKPGVDFLCFPTPTATPNYKFV CCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCEEEE FDTFGGFKIDNADITKGQDAVAEAIMDPEVQKKFNLIKGSIPARLDVAMDDFDDCAKRSF EECCCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHH SDRVEAIKNNAIYGSLTDGFAVEPRFSGVFQDVVGKFFVTDMSAEDAVKSLVDGINNAR HHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9009303; 10235622 [H]