Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475548

Identifier: 13475548

GI number: 13475548

Start: 5443767

End: 5444561

Strand: Reverse

Name: 13475548

Synonym: mll6647

Alternate gene names: NA

Gene position: 5444561-5443767 (Counterclockwise)

Preceding gene: 13475559

Following gene: 13475546

Centisome position: 77.38

GC content: 58.24

Gene sequence:

>795_bases
ATGTCCGACGTCATCCTGCGAATTAATTCATCGATCCGCGCACTTCCGCCGGCTATGCCCGTGTGGCTTGTTGGTCTCAT
GACAATTCATGCACCAGATACGATGATGAAGAACCAGGCCAGAGACCTATCGTTCGCCGACGACTTCATTTTCGCCATGC
TCGTCGAGAACGTCGTCGAATATGACGTCGAGGACGCCGTCGTCGTCAACCTCGGGCCCTGGCCCATGATTACCGGCGAT
GAGCATCCCGCGGTTGTCCCTGCCTGGAAATCCACCCAGCTGAAGGGCGGACGCATCAAATCGGCGGAGCGTGCAGCCAT
TCTCAGGGTAAAGAATGCCGTCAATCTCGGCGGCTGCATGTTCCGCGGCTGGGACTGGCTCGGCAACCGCATCAAGAGTT
TCCCGCGCGACACGCCGCTTTTCATTTCACCCCAGGACGAGATCGGCACGGTAACCACCGATCCCTATGTGTTCACCAAT
GAGCGTCGCGCAGCGGAGGCACCGCAGACCTTCAGGCTGAAACTCAATCTATGGTGGTCGCCGGGCGATACGGACTGCTT
CATCCACAATGAGCATCGGTTCCTGGAAACTCATACCCAGATCCACGGCAGCGGCCGCATGCAGAAGTTCCGGGAACGGG
CGGCGTCCACGATCTATGAGGACGTGGTAATGCCGATCGGCTATTCGCACGATCCATTCTGCCGGGTGACGGGCGAAAAC
CAATGGACCTATCCCTGGCATCGCTACTATGCCGATACGGATTCGGTCTGGCTGGCGATCGAACTGCATCCCTGA

Upstream 100 bases:

>100_bases
AGGATAACGGGCTAACCGCATTCGACATCGACTATCGTGACACGCCGTGCCGACAGTAGGAGCACCGGGGCTCGACGGTC
GAAGCGACGCAATATGACGC

Downstream 100 bases:

>100_bases
GCGTCATTTCGGACCTTTTTGCGTCCGCCGAAGGCTACACGCCTCACATCTGGATCATATCCAGCCCGTCCCCCAGATAT
TGCAGCGCCTCGCGGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVEYDVEDAVVVNLGPWPMITGD
EHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCMFRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTN
ERRAAEAPQTFRLKLNLWWSPGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN
QWTYPWHRYYADTDSVWLAIELHP

Sequences:

>Translated_264_residues
MSDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVEYDVEDAVVVNLGPWPMITGD
EHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCMFRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTN
ERRAAEAPQTFRLKLNLWWSPGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN
QWTYPWHRYYADTDSVWLAIELHP
>Mature_263_residues
SDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVEYDVEDAVVVNLGPWPMITGDE
HPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCMFRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTNE
RRAAEAPQTFRLKLNLWWSPGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGENQ
WTYPWHRYYADTDSVWLAIELHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30219; Mature: 30088

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00116 DNA_POLYMERASE_B

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVE
CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YDVEDAVVVNLGPWPMITGDEHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCM
CCCCCEEEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHEEEEEECCCCCCCCEE
FRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTNERRAAEAPQTFRLKLNLWWS
EECHHHHHHHHHHCCCCCCEEECCCHHCCCEECCCEEEECCCCCCCCCCEEEEEEEEEEC
PGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN
CCCCEEEEECCCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
QWTYPWHRYYADTDSVWLAIELHP
CCCCCHHEEECCCCCEEEEEEECC
>Mature Secondary Structure 
SDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVE
CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YDVEDAVVVNLGPWPMITGDEHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCM
CCCCCEEEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHEEEEEECCCCCCCCEE
FRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTNERRAAEAPQTFRLKLNLWWS
EECHHHHHHHHHHCCCCCCEEECCCHHCCCEECCCEEEECCCCCCCCCCEEEEEEEEEEC
PGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN
CCCCEEEEECCCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
QWTYPWHRYYADTDSVWLAIELHP
CCCCCHHEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA