| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475505
Identifier: 13475505
GI number: 13475505
Start: 5401288
End: 5402778
Strand: Reverse
Name: 13475505
Synonym: mll6593
Alternate gene names: NA
Gene position: 5402778-5401288 (Counterclockwise)
Preceding gene: 13475507
Following gene: 13475503
Centisome position: 76.79
GC content: 61.1
Gene sequence:
>1491_bases ATGGGGCCGGTCGAGGCGATCGAGACCCATATCTCACGAATTTTCTTGATCGGTGGACGTGCCTTTAAGATGAAACGGGC GGTCAAGCTGCCCTATGTCGATTTCTCGACGCCAGCACTAAGGCTGGCCGCTTGCGAAAAAGAGGTGGAACTCAACGCCA GGACCGCACCCGGCCTCTATCTGGGCGTGCGGCGCATTACCCGCGAAGCCGACGGCAAACTCGTTTTCGATGGCGCTGGC CAAATGGTCGATGCGGTGATCGAGATGGTCCGGTTTGATCAGTCGAGGCTCCTCGATCGGATGGCGACCGCAGGAGAACT GACGCCATCGCTGATGACGGCCGTCGCACGCATGATCGTGGGATATCACCGTGCCGCGCCGAAGATCCACAACGGCACCG GCTCGTTCAATTTGATGGGCGTGCTCGACATCAACGAGGCCGGCTTTGGCACCAGTCACGTTTTTACAAAACGGGAGATC GAGACGTTTGCCGGGGCTTTCCGCACCGCACTCGCGCGCCATTCCGGATTGCTGGATCGCCGGGAGGCCGCGGGCAAAAT CCGCCAGTGTCATGGCGATCTGCACCTGCGCAACATCTGCCTTTTCGATGGCGAGCCTCGCCTCTTCGATTGCATCGAAT TCAATGACCAGATCGCCAGCATCGATGTTCTGTACGACCTTGCCTTCTTGCTGATGGACCTTTGGCATCGCGGTTTCCCA GAGCTCGCCAATCTCGTGATGAACCGCTACCTCGACGAGGCCGATGACGAGGATGGCTTTGTCCTGCTGCCTTTTTTCAT CGCGGTGCGGGCAGCCGTGCGCGCGCATGTCACCGCGACCCAGGTCGAGGAAGGCAGCGCCGATTCCGGGAAATTGGCTG CCGAGGCCCGATCCTATTTCGAACTGGCCCGAACATTTCTGCAGCAAACGCCGCCGAGGCTCGTTGCCATCGGCGGCCTC AGTGGTTCAGGCAAGACGACCATTGCCGAGGCGCTCGCCGCCCATGTCGGTGCGCCGCCCGGTGCGCGCATAGTCGAAAG CGACCGCATCCGCAAAGCGATGCACGGCGTGCCCGCCGAGACCAGGCTGCCGGACAACGCCTATCGTCCTGATGTGTCCG ATCGCGTCTACAACGAAATGACATGGCGCGCCGGCCTGATTCTCTCCGAGGGCGGCTCGGTTGTAGCTGATGCGGTTTTC GACAGACCGGCCGATCGTGAGCGAATCGAGAAGGCGGCGCGAGACCGGGGTATTCCATTCTTCGGTTTCTGGCTGGAGGC GGATCCACTCGTCCTTTGGCAACGGGTCAGCGAACGCAAGGGCGGTCCTTCGGATGCAACGGTCGATATCCTTTCGCGTC AATTGCAGCGAAAAGCCGGCCAGGCCAGCTGGCGCAGGACCGATTCCGATCGAAAACCCGTCGACATCGCCGCGGAACTG AGGAGATGTTGGCAGCGCGATGCTTCCGAAACCCTGCGCACGGCCTCCTGA
Upstream 100 bases:
>100_bases CAGTCTCCGCACGACGCAGGCATCGAAGAGGCCGGACATGGTCGTTGACGAGCAGCAATCCGCTATCGCGCTCCTGCTTG ATCCTGCCTCCTATGGTGCG
Downstream 100 bases:
>100_bases CTGTTGCGGATGATCGACCTCAACCGAGTTCGAGCTTGGCCTCGACAAGCCCTGGCTCGTTCGGAAGATGCATCAAGGAG AAGCCGAATTCACGGCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MGPVEAIETHISRIFLIGGRAFKMKRAVKLPYVDFSTPALRLAACEKEVELNARTAPGLYLGVRRITREADGKLVFDGAG QMVDAVIEMVRFDQSRLLDRMATAGELTPSLMTAVARMIVGYHRAAPKIHNGTGSFNLMGVLDINEAGFGTSHVFTKREI ETFAGAFRTALARHSGLLDRREAAGKIRQCHGDLHLRNICLFDGEPRLFDCIEFNDQIASIDVLYDLAFLLMDLWHRGFP ELANLVMNRYLDEADDEDGFVLLPFFIAVRAAVRAHVTATQVEEGSADSGKLAAEARSYFELARTFLQQTPPRLVAIGGL SGSGKTTIAEALAAHVGAPPGARIVESDRIRKAMHGVPAETRLPDNAYRPDVSDRVYNEMTWRAGLILSEGGSVVADAVF DRPADRERIEKAARDRGIPFFGFWLEADPLVLWQRVSERKGGPSDATVDILSRQLQRKAGQASWRRTDSDRKPVDIAAEL RRCWQRDASETLRTAS
Sequences:
>Translated_496_residues MGPVEAIETHISRIFLIGGRAFKMKRAVKLPYVDFSTPALRLAACEKEVELNARTAPGLYLGVRRITREADGKLVFDGAG QMVDAVIEMVRFDQSRLLDRMATAGELTPSLMTAVARMIVGYHRAAPKIHNGTGSFNLMGVLDINEAGFGTSHVFTKREI ETFAGAFRTALARHSGLLDRREAAGKIRQCHGDLHLRNICLFDGEPRLFDCIEFNDQIASIDVLYDLAFLLMDLWHRGFP ELANLVMNRYLDEADDEDGFVLLPFFIAVRAAVRAHVTATQVEEGSADSGKLAAEARSYFELARTFLQQTPPRLVAIGGL SGSGKTTIAEALAAHVGAPPGARIVESDRIRKAMHGVPAETRLPDNAYRPDVSDRVYNEMTWRAGLILSEGGSVVADAVF DRPADRERIEKAARDRGIPFFGFWLEADPLVLWQRVSERKGGPSDATVDILSRQLQRKAGQASWRRTDSDRKPVDIAAEL RRCWQRDASETLRTAS >Mature_495_residues GPVEAIETHISRIFLIGGRAFKMKRAVKLPYVDFSTPALRLAACEKEVELNARTAPGLYLGVRRITREADGKLVFDGAGQ MVDAVIEMVRFDQSRLLDRMATAGELTPSLMTAVARMIVGYHRAAPKIHNGTGSFNLMGVLDINEAGFGTSHVFTKREIE TFAGAFRTALARHSGLLDRREAAGKIRQCHGDLHLRNICLFDGEPRLFDCIEFNDQIASIDVLYDLAFLLMDLWHRGFPE LANLVMNRYLDEADDEDGFVLLPFFIAVRAAVRAHVTATQVEEGSADSGKLAAEARSYFELARTFLQQTPPRLVAIGGLS GSGKTTIAEALAAHVGAPPGARIVESDRIRKAMHGVPAETRLPDNAYRPDVSDRVYNEMTWRAGLILSEGGSVVADAVFD RPADRERIEKAARDRGIPFFGFWLEADPLVLWQRVSERKGGPSDATVDILSRQLQRKAGQASWRRTDSDRKPVDIAAELR RCWQRDASETLRTAS
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 54905; Mature: 54774
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVEAIETHISRIFLIGGRAFKMKRAVKLPYVDFSTPALRLAACEKEVELNARTAPGLY CCHHHHHHHHHHHEEEECCCHHHHHHHEECCEECCCCCHHHHHHHHHHHHCCCCCCCHHH LGVRRITREADGKLVFDGAGQMVDAVIEMVRFDQSRLLDRMATAGELTPSLMTAVARMIV HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH GYHRAAPKIHNGTGSFNLMGVLDINEAGFGTSHVFTKREIETFAGAFRTALARHSGLLDR HHHHCCCCEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REAAGKIRQCHGDLHLRNICLFDGEPRLFDCIEFNDQIASIDVLYDLAFLLMDLWHRGFP HHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH ELANLVMNRYLDEADDEDGFVLLPFFIAVRAAVRAHVTATQVEEGSADSGKLAAEARSYF HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ELARTFLQQTPPRLVAIGGLSGSGKTTIAEALAAHVGAPPGARIVESDRIRKAMHGVPAE HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC TRLPDNAYRPDVSDRVYNEMTWRAGLILSEGGSVVADAVFDRPADRERIEKAARDRGIPF CCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCEEHHHHHCCCCCHHHHHHHHHHCCCCE FGFWLEADPLVLWQRVSERKGGPSDATVDILSRQLQRKAGQASWRRTDSDRKPVDIAAEL EEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHH RRCWQRDASETLRTAS HHHHHHHHHHHHHCCC >Mature Secondary Structure GPVEAIETHISRIFLIGGRAFKMKRAVKLPYVDFSTPALRLAACEKEVELNARTAPGLY CHHHHHHHHHHHEEEECCCHHHHHHHEECCEECCCCCHHHHHHHHHHHHCCCCCCCHHH LGVRRITREADGKLVFDGAGQMVDAVIEMVRFDQSRLLDRMATAGELTPSLMTAVARMIV HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH GYHRAAPKIHNGTGSFNLMGVLDINEAGFGTSHVFTKREIETFAGAFRTALARHSGLLDR HHHHCCCCEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REAAGKIRQCHGDLHLRNICLFDGEPRLFDCIEFNDQIASIDVLYDLAFLLMDLWHRGFP HHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH ELANLVMNRYLDEADDEDGFVLLPFFIAVRAAVRAHVTATQVEEGSADSGKLAAEARSYF HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ELARTFLQQTPPRLVAIGGLSGSGKTTIAEALAAHVGAPPGARIVESDRIRKAMHGVPAE HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC TRLPDNAYRPDVSDRVYNEMTWRAGLILSEGGSVVADAVFDRPADRERIEKAARDRGIPF CCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCEEHHHHHCCCCCHHHHHHHHHHCCCCE FGFWLEADPLVLWQRVSERKGGPSDATVDILSRQLQRKAGQASWRRTDSDRKPVDIAAEL EEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHH RRCWQRDASETLRTAS HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]