Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475482

Identifier: 13475482

GI number: 13475482

Start: 5372177

End: 5374279

Strand: Direct

Name: 13475482

Synonym: mlr6565

Alternate gene names: NA

Gene position: 5372177-5374279 (Clockwise)

Preceding gene: 13475481

Following gene: 13475483

Centisome position: 76.35

GC content: 63.91

Gene sequence:

>2103_bases
ATGAGCAAGAACCTGCCTCTCGCCTATCGTTTTGCGACGGAGGCGCAGTGGCAGTGCTGCCTATTCGTGGGCGTCGACCG
TACGACGGCGCCGCGGATCGGGCTGCGTCCCTATTCCCCCTACCAACCATCCATTCTGTTCAGTTCACCCGGCGCGCATG
CGCCGGCGATCACCCATGCCGGCGAAGTCGTCTGGCGCGACAACGAAGGCCGCCTGCAGCGACTGGCCTATGGCGATAGC
AGACCGAGGGAGGTAGCCGCGCCTGCTGAGATCGCCCATGCCGGGCGTCTTGTCCCGACTTCCACGGCATTGTGGGCCGC
CGGCGACGGGCTCGCTGCCTTCGACATCGACAGTCTGACGCGACTCTTCGTCGTTGATCTCGGCAGCCGACCGATCATCG
ACATTGCAGGCGACGGCCGTGAAGGTATCTTCGTGCTGGTCACAGGCGATTGTCCGCGCGAGATCCTGCATATCGACTGT
ACCGGCCGCTTGACTGGCCAATTCCAGCTTGGCGGCGCTGGCGATGCGACAGCCTTCACCTACCTTGCGCGATCGGAACG
CTTTGTCGTGCTCGCCTCCGACAATGCGAAACTGTTCTGGTTCGACGTTGGCGAGTCTGCCGCGGTGTTCTCTCTTCCAA
TCGCCGCTGCGCGGCCATGCTTGCGCGTGAGGGCACTCGGAAGCGATGGGAGATCGCGTCTTTTCCTTGCCGGGACGGAT
GGATCGGCGTTTGGCGGGCACCACAACCTGATCATGCTGGATGGCGACGGCAATCTCTCCGGCAGCGTGGAGATCGCGCA
AAGTCCGACCGGCGTGACCGCTGCCGCGGCACAGGTCTATGTTGCGACCGATGGTGGGATGATGCGGCTCGACCAGGCTG
TTACGATCCCCCGCAGTTCGGTCGAGGTGAGATCGGCAACCATGACGCCGATGCTCACATTGCCTGCAACAAGTGCCGAA
CAGCCCTGGACGCGCATCGAGACATCCGTCGCCCTGCCGGAAGGTTGCACGCTCGAAATCTCATATGTCTCCGCTAAAGA
TCCCACGATTGCCAACGAGGCACAGCGCCAGCCCATCGACGACTCGCTGCCTCAGAGCCGGCGCATCGAACGCATGCGCG
AGCTTCTCGGTCCGTGGCGCAAATTCGCCTTCCACGGTGCTGGCGCTGGCACCGTCACGCTCACGGCGCCGTTAATCGAC
GTCCGCGATCCGTTCTTGTGGGTGCAGCTTGAACTGATCATGTCCCCGGGCGCGGGCATTCCCGCGCTTTCGGAATTCAG
CGTGTTCTATTCCGGGCAGACGCTTATCGATAACCTGCCCGCCATCTACCGCCGATCGGAGGAAGGGTCCGGCGATTTCC
TGCGCTCGTTCGTGGGCGTGTTGGAGGCGACGACGCAGACGCTCGACTCCAGCATCTTCGCACTCGGCAGCAGGATCCAC
CCCGATACGTCGCCCGGCGAATGGCTCGACTTCGTTGCGCGCTGGCTGGGCATCCCTTGGGACGATGCGCTGTCTCCGGA
GCAGAAGCAACGCATCGTCAAGCGTGCGGCCGACATCATCGCCGGCTATGGCACGAGGGCGGGGCTGGAGGTGCTGCTCG
AATGCCTATTGCCGGAAAAGCCGCGGCGGTTCCGTGTCACCGATATGACCGTCGACTTTGGCGTGGCCATGCTCGGAGGC
GACAGCTGCGCGGGAAGCAGGCTTCCGGCGATCCTCGCCGGGCTGCCACGGACCGCGACGGAGCTCGGTAACAAGGCGAT
CCTCGGATGCGCGCGTCTACCCTGTCCCGACGTGCCCAACGGTGCGATGCACCACATTGGGCGCATCCGCATCGACATCG
GCGCCACCGCTGAGGAATCCGCGGCATGGCAGCCTTGGTTCGGAGAACTCATCAACAGCATGTTGCCGGTGGCGACGCGC
GCGCATCTGCGCTGGGTCAGCCCTCTTGCATTCAGCCGGACGTTTACACTCGACGGCGAGTACACACTCGATGCCGAGCC
ACTGGCGCATCTCGGCACAGACGCCGTTGCCGGTGCTACACGGCTGGCGGGCAGGCGCAGCGGAATGCTGTCGCGGCATG
GCGCAAATCAGACAATACGGTGA

Upstream 100 bases:

>100_bases
AGGCGGTGGAGACGGTGAAGGTGCCGCGCACCGGGCTGCCACACATCGATCTCGGATCGAGCGAGATCGATATCGCCCTT
CCGGCGGAAGGAGCCACGCG

Downstream 100 bases:

>100_bases
TCAACGCGTTAGGCGTGAGGGTGCAAGCATGGACAAAGATACGATGAAGCAGACATCCCCGAAGGCGCCGCCCGCCCACC
AATACTGCTGCGACGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MSKNLPLAYRFATEAQWQCCLFVGVDRTTAPRIGLRPYSPYQPSILFSSPGAHAPAITHAGEVVWRDNEGRLQRLAYGDS
RPREVAAPAEIAHAGRLVPTSTALWAAGDGLAAFDIDSLTRLFVVDLGSRPIIDIAGDGREGIFVLVTGDCPREILHIDC
TGRLTGQFQLGGAGDATAFTYLARSERFVVLASDNAKLFWFDVGESAAVFSLPIAAARPCLRVRALGSDGRSRLFLAGTD
GSAFGGHHNLIMLDGDGNLSGSVEIAQSPTGVTAAAAQVYVATDGGMMRLDQAVTIPRSSVEVRSATMTPMLTLPATSAE
QPWTRIETSVALPEGCTLEISYVSAKDPTIANEAQRQPIDDSLPQSRRIERMRELLGPWRKFAFHGAGAGTVTLTAPLID
VRDPFLWVQLELIMSPGAGIPALSEFSVFYSGQTLIDNLPAIYRRSEEGSGDFLRSFVGVLEATTQTLDSSIFALGSRIH
PDTSPGEWLDFVARWLGIPWDDALSPEQKQRIVKRAADIIAGYGTRAGLEVLLECLLPEKPRRFRVTDMTVDFGVAMLGG
DSCAGSRLPAILAGLPRTATELGNKAILGCARLPCPDVPNGAMHHIGRIRIDIGATAEESAAWQPWFGELINSMLPVATR
AHLRWVSPLAFSRTFTLDGEYTLDAEPLAHLGTDAVAGATRLAGRRSGMLSRHGANQTIR

Sequences:

>Translated_700_residues
MSKNLPLAYRFATEAQWQCCLFVGVDRTTAPRIGLRPYSPYQPSILFSSPGAHAPAITHAGEVVWRDNEGRLQRLAYGDS
RPREVAAPAEIAHAGRLVPTSTALWAAGDGLAAFDIDSLTRLFVVDLGSRPIIDIAGDGREGIFVLVTGDCPREILHIDC
TGRLTGQFQLGGAGDATAFTYLARSERFVVLASDNAKLFWFDVGESAAVFSLPIAAARPCLRVRALGSDGRSRLFLAGTD
GSAFGGHHNLIMLDGDGNLSGSVEIAQSPTGVTAAAAQVYVATDGGMMRLDQAVTIPRSSVEVRSATMTPMLTLPATSAE
QPWTRIETSVALPEGCTLEISYVSAKDPTIANEAQRQPIDDSLPQSRRIERMRELLGPWRKFAFHGAGAGTVTLTAPLID
VRDPFLWVQLELIMSPGAGIPALSEFSVFYSGQTLIDNLPAIYRRSEEGSGDFLRSFVGVLEATTQTLDSSIFALGSRIH
PDTSPGEWLDFVARWLGIPWDDALSPEQKQRIVKRAADIIAGYGTRAGLEVLLECLLPEKPRRFRVTDMTVDFGVAMLGG
DSCAGSRLPAILAGLPRTATELGNKAILGCARLPCPDVPNGAMHHIGRIRIDIGATAEESAAWQPWFGELINSMLPVATR
AHLRWVSPLAFSRTFTLDGEYTLDAEPLAHLGTDAVAGATRLAGRRSGMLSRHGANQTIR
>Mature_699_residues
SKNLPLAYRFATEAQWQCCLFVGVDRTTAPRIGLRPYSPYQPSILFSSPGAHAPAITHAGEVVWRDNEGRLQRLAYGDSR
PREVAAPAEIAHAGRLVPTSTALWAAGDGLAAFDIDSLTRLFVVDLGSRPIIDIAGDGREGIFVLVTGDCPREILHIDCT
GRLTGQFQLGGAGDATAFTYLARSERFVVLASDNAKLFWFDVGESAAVFSLPIAAARPCLRVRALGSDGRSRLFLAGTDG
SAFGGHHNLIMLDGDGNLSGSVEIAQSPTGVTAAAAQVYVATDGGMMRLDQAVTIPRSSVEVRSATMTPMLTLPATSAEQ
PWTRIETSVALPEGCTLEISYVSAKDPTIANEAQRQPIDDSLPQSRRIERMRELLGPWRKFAFHGAGAGTVTLTAPLIDV
RDPFLWVQLELIMSPGAGIPALSEFSVFYSGQTLIDNLPAIYRRSEEGSGDFLRSFVGVLEATTQTLDSSIFALGSRIHP
DTSPGEWLDFVARWLGIPWDDALSPEQKQRIVKRAADIIAGYGTRAGLEVLLECLLPEKPRRFRVTDMTVDFGVAMLGGD
SCAGSRLPAILAGLPRTATELGNKAILGCARLPCPDVPNGAMHHIGRIRIDIGATAEESAAWQPWFGELINSMLPVATRA
HLRWVSPLAFSRTFTLDGEYTLDAEPLAHLGTDAVAGATRLAGRRSGMLSRHGANQTIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75280; Mature: 75148

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNLPLAYRFATEAQWQCCLFVGVDRTTAPRIGLRPYSPYQPSILFSSPGAHAPAITHA
CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECC
GEVVWRDNEGRLQRLAYGDSRPREVAAPAEIAHAGRLVPTSTALWAAGDGLAAFDIDSLT
CEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEHHHCC
RLFVVDLGSRPIIDIAGDGREGIFVLVTGDCPREILHIDCTGRLTGQFQLGGAGDATAFT
EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCHHHHH
YLARSERFVVLASDNAKLFWFDVGESAAVFSLPIAAARPCLRVRALGSDGRSRLFLAGTD
EEECCCEEEEEECCCCEEEEEECCCCCEEEECCHHHCCCEEEEEEECCCCCCEEEEEECC
GSAFGGHHNLIMLDGDGNLSGSVEIAQSPTGVTAAAAQVYVATDGGMMRLDQAVTIPRSS
CCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEEECCCEEEECCEEECCCCC
VEVRSATMTPMLTLPATSAEQPWTRIETSVALPEGCTLEISYVSAKDPTIANEAQRQPID
CEEEEEECCEEEEECCCCCCCCHHHHEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCCC
DSLPQSRRIERMRELLGPWRKFAFHGAGAGTVTLTAPLIDVRDPFLWVQLELIMSPGAGI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCC
PALSEFSVFYSGQTLIDNLPAIYRRSEEGSGDFLRSFVGVLEATTQTLDSSIFALGSRIH
CCHHHEEEEECCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDTSPGEWLDFVARWLGIPWDDALSPEQKQRIVKRAADIIAGYGTRAGLEVLLECLLPEK
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
PRRFRVTDMTVDFGVAMLGGDSCAGSRLPAILAGLPRTATELGNKAILGCARLPCPDVPN
CCEEEEEEEEEECCEEEECCCCCCCCCCHHHHHCCCHHHHHCCCEEEEEECCCCCCCCCC
GAMHHIGRIRIDIGATAEESAAWQPWFGELINSMLPVATRAHLRWVSPLAFSRTFTLDGE
HHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHEECCCHHEEEEEEECCC
YTLDAEPLAHLGTDAVAGATRLAGRRSGMLSRHGANQTIR
EEECCCHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCC
>Mature Secondary Structure 
SKNLPLAYRFATEAQWQCCLFVGVDRTTAPRIGLRPYSPYQPSILFSSPGAHAPAITHA
CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECC
GEVVWRDNEGRLQRLAYGDSRPREVAAPAEIAHAGRLVPTSTALWAAGDGLAAFDIDSLT
CEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEHHHCC
RLFVVDLGSRPIIDIAGDGREGIFVLVTGDCPREILHIDCTGRLTGQFQLGGAGDATAFT
EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCEEEEEEEECCCCCHHHHH
YLARSERFVVLASDNAKLFWFDVGESAAVFSLPIAAARPCLRVRALGSDGRSRLFLAGTD
EEECCCEEEEEECCCCEEEEEECCCCCEEEECCHHHCCCEEEEEEECCCCCCEEEEEECC
GSAFGGHHNLIMLDGDGNLSGSVEIAQSPTGVTAAAAQVYVATDGGMMRLDQAVTIPRSS
CCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEEECCCEEEECCEEECCCCC
VEVRSATMTPMLTLPATSAEQPWTRIETSVALPEGCTLEISYVSAKDPTIANEAQRQPID
CEEEEEECCEEEEECCCCCCCCHHHHEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCCC
DSLPQSRRIERMRELLGPWRKFAFHGAGAGTVTLTAPLIDVRDPFLWVQLELIMSPGAGI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCC
PALSEFSVFYSGQTLIDNLPAIYRRSEEGSGDFLRSFVGVLEATTQTLDSSIFALGSRIH
CCHHHEEEEECCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDTSPGEWLDFVARWLGIPWDDALSPEQKQRIVKRAADIIAGYGTRAGLEVLLECLLPEK
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
PRRFRVTDMTVDFGVAMLGGDSCAGSRLPAILAGLPRTATELGNKAILGCARLPCPDVPN
CCEEEEEEEEEECCEEEECCCCCCCCCCHHHHHCCCHHHHHCCCEEEEEECCCCCCCCCC
GAMHHIGRIRIDIGATAEESAAWQPWFGELINSMLPVATRAHLRWVSPLAFSRTFTLDGE
HHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHEECCCHHEEEEEEECCC
YTLDAEPLAHLGTDAVAGATRLAGRRSGMLSRHGANQTIR
EEECCCHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA