| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475481
Identifier: 13475481
GI number: 13475481
Start: 5370255
End: 5372180
Strand: Direct
Name: 13475481
Synonym: mlr6564
Alternate gene names: NA
Gene position: 5370255-5372180 (Clockwise)
Preceding gene: 13475480
Following gene: 13475482
Centisome position: 76.32
GC content: 66.3
Gene sequence:
>1926_bases ATGAGCCAGCTTGCTCCCGTCCTGTTCACGCGTCGCTATTCCGATCTGGTCGAGATCGGACTTTCGCGCCTGCCAAGCCT ATCGCCCGACTGGACGGATCACAACGCGCACGATCCCGGCATCTCGCTGATAGAACTGCTTGCCTGGGTCGCGGAGGCCG AGATCTATGCGTTGGCACGCAGCCGCCGCGACGAACGCCTTGCCTATGCTGCGCTGATGGGCTTCGTGCCCAATGGCGCA CGTCCAGCCCAAGGACTGATCTGGCCGGACCATGACTCCCCCGATGCGCCGGAAGCGATGTTTACCAGCGCAATCGTCAT CGAGCGCGACCAGGTCATCCACACTGTTCGCGCGGACCAGCCAAGCTTCCGGCCGTTGCAAAGGATCTTGTGGCTGGCAG CGCGCGTCGTGGCGCTGACAACGCGGCTGCCGGACGGAAGCATGGTCGACCATAGCGGCGCCAACCGACGCGGCAGCCCG GCTTTTCAGCCGTTCGGCGCGGCCGACGGGCGCGGCGTGGTGCTTGCGATGACCCTTGAGGCGACTGGCGCCGCCCCCCT GTTCTGGCGGGAGCCGGCCGACGATGCGCGGCTTGTCATCGGCGTGCGCGCCGCCGGAGGGCAAAGCAAAGCAGCGCCGG CTGCTGCCAACTCCGCCGGATCGCCGCTAGAGGTCACTCTGGTCACCCCAAGCCAGCGTGTCCCGCTCCGGATCGTCGAA GACACGACGGGCGGCTTTCTGCGCACGGGATTCTGCAGTCTCGACGTGTCGGCAATACGCGACCCGTCAACGTCGGCGAT CCTGGAGTTTCGGCTGCCGCGCGGTTTTGACCGGGCACCCGGCATCCTGCGCATCGAGCCCAACGTCATCCCAATCACGC AGAGCGAGGCGGCCAGCGAGATCCATGTGCTGAGTGGCGCGCCCAATCAGGGATTCGATCTGGAATACCCAGGGCTGGAA TTCGAACCGGGCGCCGAATCCGTAAAGATAGAGGTCGAGGCGGTCGGCGGCTTCGAGGAGTGGAAGCGTTGCGACCGGCT TTCGGACCAAGGCCCGCAGGATCGTGTCTTCCAACTTGATCCGGTCGCGGCCCGGATCAGTTTCGGCAACGGTATCAATG GGACCATACCTCCGTCGGCGGCCCAGATCAGGGCTTCCTACAGCGTAAGTCAGGGGATGGCCGGCAATACGGCCGCCAAC CGCAAATGGCTCGTCTTTCACTCGATGCCGGCGTCTGGCGTCAATCCCGACCCCATTGCGGGTGGCGAGGATCCTTCGGG CTGGCTCGAACAGCGCCGTCAGGCGCGCCAGTCCATCGCGCAGGTCCATCCACTGGTAAGCGTGGCAGACATCGAAGCGG CTGCGCTCGCCCTTCCAGATCTTGAGGTCGGAAGGGCGTGGCTGGTTCCGGCGCGCATCGGCGACGTTTCGACCGAGACG ATCCGGCTCGTCGCCATGCAGTCGCGTCTGGCCGGCGCCGAGCCTCGGTCCGTGCCCGAGACGGCGCGCTGGCTGGAAGC AGTCCGGCGCGCACTCGTGCCACGGATGTCGCTTGGCGCGCGACTTGCTGTCGTCGCGCCGCGCTATGTCGACTTCACCA TTCGCGCCCGCATCGTGCCCGAGCCGAGACTAGACGTCGGGCAGGTTAAGCGTAGCGTCGTGCGGGAACTGACGAGACGG CTTGCATTGGTCGGCTCCGCAGCTGGCCAGCCCCTGCGCGCTTTCGGCCTGGCGGTCACGCGACGCGATCTCGTGGCCTG GCTGCAGGCGCTACCCGATGTGCGGCACGTAGCCGACCTGCAGGTGATGCTTGCCGGCGGCAAGGCGGTGGAGACGGTGA AGGTGCCGCGCACCGGGCTGCCACACATCGATCTCGGATCGAGCGAGATCGATATCGCCCTTCCGGCGGAAGGAGCCACG CGATGA
Upstream 100 bases:
>100_bases GTGGGGTTCGACCCTGGTCAGCGAAAGTCGGCGCCCGCGCACTGGCGCTGCTCGATGATGACGGAGTACAGATCGAATTC GACGTGACGGAGGCGGTCGC
Downstream 100 bases:
>100_bases GCAAGAACCTGCCTCTCGCCTATCGTTTTGCGACGGAGGCGCAGTGGCAGTGCTGCCTATTCGTGGGCGTCGACCGTACG ACGGCGCCGCGGATCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSQLAPVLFTRRYSDLVEIGLSRLPSLSPDWTDHNAHDPGISLIELLAWVAEAEIYALARSRRDERLAYAALMGFVPNGA RPAQGLIWPDHDSPDAPEAMFTSAIVIERDQVIHTVRADQPSFRPLQRILWLAARVVALTTRLPDGSMVDHSGANRRGSP AFQPFGAADGRGVVLAMTLEATGAAPLFWREPADDARLVIGVRAAGGQSKAAPAAANSAGSPLEVTLVTPSQRVPLRIVE DTTGGFLRTGFCSLDVSAIRDPSTSAILEFRLPRGFDRAPGILRIEPNVIPITQSEAASEIHVLSGAPNQGFDLEYPGLE FEPGAESVKIEVEAVGGFEEWKRCDRLSDQGPQDRVFQLDPVAARISFGNGINGTIPPSAAQIRASYSVSQGMAGNTAAN RKWLVFHSMPASGVNPDPIAGGEDPSGWLEQRRQARQSIAQVHPLVSVADIEAAALALPDLEVGRAWLVPARIGDVSTET IRLVAMQSRLAGAEPRSVPETARWLEAVRRALVPRMSLGARLAVVAPRYVDFTIRARIVPEPRLDVGQVKRSVVRELTRR LALVGSAAGQPLRAFGLAVTRRDLVAWLQALPDVRHVADLQVMLAGGKAVETVKVPRTGLPHIDLGSSEIDIALPAEGAT R
Sequences:
>Translated_641_residues MSQLAPVLFTRRYSDLVEIGLSRLPSLSPDWTDHNAHDPGISLIELLAWVAEAEIYALARSRRDERLAYAALMGFVPNGA RPAQGLIWPDHDSPDAPEAMFTSAIVIERDQVIHTVRADQPSFRPLQRILWLAARVVALTTRLPDGSMVDHSGANRRGSP AFQPFGAADGRGVVLAMTLEATGAAPLFWREPADDARLVIGVRAAGGQSKAAPAAANSAGSPLEVTLVTPSQRVPLRIVE DTTGGFLRTGFCSLDVSAIRDPSTSAILEFRLPRGFDRAPGILRIEPNVIPITQSEAASEIHVLSGAPNQGFDLEYPGLE FEPGAESVKIEVEAVGGFEEWKRCDRLSDQGPQDRVFQLDPVAARISFGNGINGTIPPSAAQIRASYSVSQGMAGNTAAN RKWLVFHSMPASGVNPDPIAGGEDPSGWLEQRRQARQSIAQVHPLVSVADIEAAALALPDLEVGRAWLVPARIGDVSTET IRLVAMQSRLAGAEPRSVPETARWLEAVRRALVPRMSLGARLAVVAPRYVDFTIRARIVPEPRLDVGQVKRSVVRELTRR LALVGSAAGQPLRAFGLAVTRRDLVAWLQALPDVRHVADLQVMLAGGKAVETVKVPRTGLPHIDLGSSEIDIALPAEGAT R >Mature_640_residues SQLAPVLFTRRYSDLVEIGLSRLPSLSPDWTDHNAHDPGISLIELLAWVAEAEIYALARSRRDERLAYAALMGFVPNGAR PAQGLIWPDHDSPDAPEAMFTSAIVIERDQVIHTVRADQPSFRPLQRILWLAARVVALTTRLPDGSMVDHSGANRRGSPA FQPFGAADGRGVVLAMTLEATGAAPLFWREPADDARLVIGVRAAGGQSKAAPAAANSAGSPLEVTLVTPSQRVPLRIVED TTGGFLRTGFCSLDVSAIRDPSTSAILEFRLPRGFDRAPGILRIEPNVIPITQSEAASEIHVLSGAPNQGFDLEYPGLEF EPGAESVKIEVEAVGGFEEWKRCDRLSDQGPQDRVFQLDPVAARISFGNGINGTIPPSAAQIRASYSVSQGMAGNTAANR KWLVFHSMPASGVNPDPIAGGEDPSGWLEQRRQARQSIAQVHPLVSVADIEAAALALPDLEVGRAWLVPARIGDVSTETI RLVAMQSRLAGAEPRSVPETARWLEAVRRALVPRMSLGARLAVVAPRYVDFTIRARIVPEPRLDVGQVKRSVVRELTRRL ALVGSAAGQPLRAFGLAVTRRDLVAWLQALPDVRHVADLQVMLAGGKAVETVKVPRTGLPHIDLGSSEIDIALPAEGATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68932; Mature: 68801
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLAPVLFTRRYSDLVEIGLSRLPSLSPDWTDHNAHDPGISLIELLAWVAEAEIYALAR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRRDERLAYAALMGFVPNGARPAQGLIWPDHDSPDAPEAMFTSAIVIERDQVIHTVRADQ CCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHEEEEECHHHHEECCCCC PSFRPLQRILWLAARVVALTTRLPDGSMVDHSGANRRGSPAFQPFGAADGRGVVLAMTLE CCHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE ATGAAPLFWREPADDARLVIGVRAAGGQSKAAPAAANSAGSPLEVTLVTPSQRVPLRIVE CCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE DTTGGFLRTGFCSLDVSAIRDPSTSAILEFRLPRGFDRAPGILRIEPNVIPITQSEAASE CCCCCEEEECEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCE IHVLSGAPNQGFDLEYPGLEFEPGAESVKIEVEAVGGFEEWKRCDRLSDQGPQDRVFQLD EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEC PVAARISFGNGINGTIPPSAAQIRASYSVSQGMAGNTAANRKWLVFHSMPASGVNPDPIA CCEEEEECCCCCCCCCCCCHHHHEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC GGEDPSGWLEQRRQARQSIAQVHPLVSVADIEAAALALPDLEVGRAWLVPARIGDVSTET CCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCCCCCEEEEECCCCCCCHHH IRLVAMQSRLAGAEPRSVPETARWLEAVRRALVPRMSLGARLAVVAPRYVDFTIRARIVP EEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEEEECC EPRLDVGQVKRSVVRELTRRLALVGSAAGQPLRAFGLAVTRRDLVAWLQALPDVRHVADL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCE QVMLAGGKAVETVKVPRTGLPHIDLGSSEIDIALPAEGATR EEEEECCCEEEEEECCCCCCCCEECCCCCEEEEECCCCCCC >Mature Secondary Structure SQLAPVLFTRRYSDLVEIGLSRLPSLSPDWTDHNAHDPGISLIELLAWVAEAEIYALAR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRRDERLAYAALMGFVPNGARPAQGLIWPDHDSPDAPEAMFTSAIVIERDQVIHTVRADQ CCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHEEEEECHHHHEECCCCC PSFRPLQRILWLAARVVALTTRLPDGSMVDHSGANRRGSPAFQPFGAADGRGVVLAMTLE CCHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE ATGAAPLFWREPADDARLVIGVRAAGGQSKAAPAAANSAGSPLEVTLVTPSQRVPLRIVE CCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE DTTGGFLRTGFCSLDVSAIRDPSTSAILEFRLPRGFDRAPGILRIEPNVIPITQSEAASE CCCCCEEEECEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCE IHVLSGAPNQGFDLEYPGLEFEPGAESVKIEVEAVGGFEEWKRCDRLSDQGPQDRVFQLD EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEC PVAARISFGNGINGTIPPSAAQIRASYSVSQGMAGNTAANRKWLVFHSMPASGVNPDPIA CCEEEEECCCCCCCCCCCCHHHHEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC GGEDPSGWLEQRRQARQSIAQVHPLVSVADIEAAALALPDLEVGRAWLVPARIGDVSTET CCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCCCCCEEEEECCCCCCCHHH IRLVAMQSRLAGAEPRSVPETARWLEAVRRALVPRMSLGARLAVVAPRYVDFTIRARIVP EEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEEEECC EPRLDVGQVKRSVVRELTRRLALVGSAAGQPLRAFGLAVTRRDLVAWLQALPDVRHVADL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCE QVMLAGGKAVETVKVPRTGLPHIDLGSSEIDIALPAEGATR EEEEECCCEEEEEECCCCCCCCEECCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA