| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is acsA1 [H]
Identifier: 13475461
GI number: 13475461
Start: 5343726
End: 5345684
Strand: Direct
Name: acsA1 [H]
Synonym: mlr6539
Alternate gene names: 13475461
Gene position: 5343726-5345684 (Clockwise)
Preceding gene: 13475459
Following gene: 13475463
Centisome position: 75.95
GC content: 63.65
Gene sequence:
>1959_bases ATGGCTGCCGAAGTACCGCTCTGGACCCCGACGCAAGACCGGATCGACGCTTCGCCATTGACGGCTTTCCTGAAGGCCGC GGAGGCGAAAGCCGGCGCCACATTCGCCTCTTATGCCGATCTTCACCGCTGGTCGGTCGAGGATCGCGAGGGGTTCTGGA GCCTGGTCTGGGATTTCTGCGGCATCGCCGGCGAAAAGGGCGAGCGCCTGCTCGCCGATGGCGACAAGATGCCGGGTGCC TCCTTCTTTCCCGACGCGACGTTGAATTTCGCCGAGAACCTGTTGAAGAAGACCGGCGCGGGCGAGGCGATCGTCTTCCG CGGCGAGGACAAGGTCGAGCGGCGGCTGTCCTGGAACCAACTGCATGGCCTGGTTTCGCGCCTGCAGCAGCTTTTCCTGT CGCTCAAGGTCAAGAAGGGCGACCGCATTGCCGCGATGATGCCCAACATGCCCGAGACAGTCGCTGCCATGCTGGCCGCC GCCTCCATCGGCGCGGTGTGGTCATCCTGCTCGCCCGACTTCGGCGAGCAGGGCGTGCTCGACCGGTTCGGCCAGATCGA GCCCGTCATCTTCATCGGGCCTGACGGCTATTGGTACAATGGCAAGGCGATCGAGGTCGCTGACAAGGTCGCCGCGGTCG CGGCCAAGCTCGGCAGTGTCCGCAAGGTGCTGCTTGTCGATTATCTCGGTACTTCGGCCGATGTGGCGGCAACCATCGAC AAGGCGGTGGCGATGGAAGAGGCGCTGTCGCCCTTCGCCGCCAAGCCAGTCAGCTTCGAGCCTCTGCCGTTTTCGCATCC GCTCTACATCCTGTTTTCATCAGGAACCACCGGCATCCCCAAATGCATCGTCCATTCGGCCGGCGGGACGCTGATCCAGC ATGTCAAGGAACACCGGCTGCATGCCGGCCTCGTCGACGGCGACCGCTTCTTCTACTTCACCACGTGCGGCTGGATGATG TGGAACTGGCTGGTGTCGGGCCTGGCTTCCGGGGCGACGCTGCTGCTCTACGACGGCTCGCCCTTCTACCCCGACGGCAA TGTGCTGTTCGACTTCGTCGATGCCGAGAAGATGACCTTCTTCGGCACCTCGGCCAAGTTCATCGATTCCGTGCGCAAGG CCGGCCTCAAGCCGATCCGCAGCCATGACCTGTCGACCGTGCGGGCGATCTCCTCCACCGGTTCGCCCCTGTCGCCCGAG GATTTCCGCTTCGTCTACGAAGGCATCAAGAAGGATGTGCATCTCGCCTCGGTTTCCGGCGGCACCGACATCGTCTCCTG CTTCGTGCTCGGCGTGCCCAACCAGCCGGTGTGGACCGGCGAGATCCAGGGACCAGGCCTCGGCCTGGCCGTCGATGTCT GGGACGATGACGGCAAGCCGATCCGGCAGGAAAAGGGCGAACTGGTCTGCACCAAGGCGTTTCCGTCGATGCCGATCGGC TTCTGGAACGATCCCGAAGGCAAGAAATACCAGGCGGCCTATTTCGAGCGTTTCGACAATGTCTGGTGCCATGGCGATTT CGCTGAGTGGACGGCGCATGGCGGCATGATCATCCATGGCCGCTCGGACGCCACCCTCAATCCGGGCGGGGTGCGCATCG GCACGGCGGAGATCTACAACCAGGTCGAACAGATGCCGGAAATCCTGGAGGCGCTGTGCATCGGCCAGGATTTCGACAAT GACGTGCGTGTCGTGCTGTTCGTGCGGCTGGCCGCGGGCGTCGAACTGGACGAGGATCTGGAAAAACGCATCCGCGCCAA GATCCGCAGCGGTGCCAGCCCCCGCCATGTCCCGGCCAGGATCGTCGCGGTCACGGATATTCCGCGCACCAAGTCGGGCA AGATCACCGAACTCGCCGTGCGCGACGTCGTGCATGGCCGCGCCATCAAGAACAAGGAAGCGCTCGCCAACCCGGAAGCG CTGGAGCTGTTCAGGAACCTGCCGCAGCTTGCCGAATGA
Upstream 100 bases:
>100_bases GCGATGGCATTTGCGCACACCTGGCCGCTTCGGCCCAACAAAATCTTGCTCTGCTGCGCTGCGATATGCATAAGCGATGA CGACCGTGGGAGGATCGATA
Downstream 100 bases:
>100_bases CCCCGATCGGCATGGTTAACGAACTATGTTGCGGGAATTTACCTAGATTTCACGAGTGGTACACATTCGTAAATTTTTCG GCGGTCCGGTAAGGACTTGT
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MAAEVPLWTPTQDRIDASPLTAFLKAAEAKAGATFASYADLHRWSVEDREGFWSLVWDFCGIAGEKGERLLADGDKMPGA SFFPDATLNFAENLLKKTGAGEAIVFRGEDKVERRLSWNQLHGLVSRLQQLFLSLKVKKGDRIAAMMPNMPETVAAMLAA ASIGAVWSSCSPDFGEQGVLDRFGQIEPVIFIGPDGYWYNGKAIEVADKVAAVAAKLGSVRKVLLVDYLGTSADVAATID KAVAMEEALSPFAAKPVSFEPLPFSHPLYILFSSGTTGIPKCIVHSAGGTLIQHVKEHRLHAGLVDGDRFFYFTTCGWMM WNWLVSGLASGATLLLYDGSPFYPDGNVLFDFVDAEKMTFFGTSAKFIDSVRKAGLKPIRSHDLSTVRAISSTGSPLSPE DFRFVYEGIKKDVHLASVSGGTDIVSCFVLGVPNQPVWTGEIQGPGLGLAVDVWDDDGKPIRQEKGELVCTKAFPSMPIG FWNDPEGKKYQAAYFERFDNVWCHGDFAEWTAHGGMIIHGRSDATLNPGGVRIGTAEIYNQVEQMPEILEALCIGQDFDN DVRVVLFVRLAAGVELDEDLEKRIRAKIRSGASPRHVPARIVAVTDIPRTKSGKITELAVRDVVHGRAIKNKEALANPEA LELFRNLPQLAE
Sequences:
>Translated_652_residues MAAEVPLWTPTQDRIDASPLTAFLKAAEAKAGATFASYADLHRWSVEDREGFWSLVWDFCGIAGEKGERLLADGDKMPGA SFFPDATLNFAENLLKKTGAGEAIVFRGEDKVERRLSWNQLHGLVSRLQQLFLSLKVKKGDRIAAMMPNMPETVAAMLAA ASIGAVWSSCSPDFGEQGVLDRFGQIEPVIFIGPDGYWYNGKAIEVADKVAAVAAKLGSVRKVLLVDYLGTSADVAATID KAVAMEEALSPFAAKPVSFEPLPFSHPLYILFSSGTTGIPKCIVHSAGGTLIQHVKEHRLHAGLVDGDRFFYFTTCGWMM WNWLVSGLASGATLLLYDGSPFYPDGNVLFDFVDAEKMTFFGTSAKFIDSVRKAGLKPIRSHDLSTVRAISSTGSPLSPE DFRFVYEGIKKDVHLASVSGGTDIVSCFVLGVPNQPVWTGEIQGPGLGLAVDVWDDDGKPIRQEKGELVCTKAFPSMPIG FWNDPEGKKYQAAYFERFDNVWCHGDFAEWTAHGGMIIHGRSDATLNPGGVRIGTAEIYNQVEQMPEILEALCIGQDFDN DVRVVLFVRLAAGVELDEDLEKRIRAKIRSGASPRHVPARIVAVTDIPRTKSGKITELAVRDVVHGRAIKNKEALANPEA LELFRNLPQLAE >Mature_651_residues AAEVPLWTPTQDRIDASPLTAFLKAAEAKAGATFASYADLHRWSVEDREGFWSLVWDFCGIAGEKGERLLADGDKMPGAS FFPDATLNFAENLLKKTGAGEAIVFRGEDKVERRLSWNQLHGLVSRLQQLFLSLKVKKGDRIAAMMPNMPETVAAMLAAA SIGAVWSSCSPDFGEQGVLDRFGQIEPVIFIGPDGYWYNGKAIEVADKVAAVAAKLGSVRKVLLVDYLGTSADVAATIDK AVAMEEALSPFAAKPVSFEPLPFSHPLYILFSSGTTGIPKCIVHSAGGTLIQHVKEHRLHAGLVDGDRFFYFTTCGWMMW NWLVSGLASGATLLLYDGSPFYPDGNVLFDFVDAEKMTFFGTSAKFIDSVRKAGLKPIRSHDLSTVRAISSTGSPLSPED FRFVYEGIKKDVHLASVSGGTDIVSCFVLGVPNQPVWTGEIQGPGLGLAVDVWDDDGKPIRQEKGELVCTKAFPSMPIGF WNDPEGKKYQAAYFERFDNVWCHGDFAEWTAHGGMIIHGRSDATLNPGGVRIGTAEIYNQVEQMPEILEALCIGQDFDND VRVVLFVRLAAGVELDEDLEKRIRAKIRSGASPRHVPARIVAVTDIPRTKSGKITELAVRDVVHGRAIKNKEALANPEAL ELFRNLPQLAE
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=656, Percent_Identity=42.9878048780488, Blast_Score=551, Evalue=1e-157, Organism=Homo sapiens, GI8923896, Length=653, Percent_Identity=25.7274119448698, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI253970489, Length=666, Percent_Identity=25.3753753753754, Blast_Score=173, Evalue=6e-43, Organism=Homo sapiens, GI28416953, Length=621, Percent_Identity=25.2818035426731, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI13375727, Length=617, Percent_Identity=23.8249594813614, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI38505220, Length=496, Percent_Identity=20.9677419354839, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI115511026, Length=528, Percent_Identity=21.4015151515152, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI42544132, Length=550, Percent_Identity=20, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI1790505, Length=634, Percent_Identity=27.7602523659306, Blast_Score=202, Evalue=5e-53, Organism=Escherichia coli, GI1786529, Length=641, Percent_Identity=25.7410296411856, Blast_Score=152, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17569507, Length=631, Percent_Identity=37.4009508716323, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI71983001, Length=650, Percent_Identity=26, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI71982997, Length=640, Percent_Identity=26.40625, Blast_Score=175, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6319264, Length=674, Percent_Identity=27.0029673590504, Blast_Score=186, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6323182, Length=644, Percent_Identity=25.776397515528, Blast_Score=174, Evalue=5e-44, Organism=Drosophila melanogaster, GI24667955, Length=660, Percent_Identity=26.3636363636364, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI62472339, Length=565, Percent_Identity=26.9026548672566, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI24667959, Length=528, Percent_Identity=26.8939393939394, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI21355225, Length=641, Percent_Identity=22.7769110764431, Blast_Score=135, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 71155; Mature: 71024
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEVPLWTPTQDRIDASPLTAFLKAAEAKAGATFASYADLHRWSVEDREGFWSLVWDFC CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH GIAGEKGERLLADGDKMPGASFFPDATLNFAENLLKKTGAGEAIVFRGEDKVERRLSWNQ CCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH LHGLVSRLQQLFLSLKVKKGDRIAAMMPNMPETVAAMLAAASIGAVWSSCSPDFGEQGVL HHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH DRFGQIEPVIFIGPDGYWYNGKAIEVADKVAAVAAKLGSVRKVLLVDYLGTSADVAATID HHCCCCCEEEEECCCCEEECCEEEHHHHHHHHHHHHHHHHHHEEEEHHCCCCCHHHHHHH KAVAMEEALSPFAAKPVSFEPLPFSHPLYILFSSGTTGIPKCIVHSAGGTLIQHVKEHRL HHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCHHHHHHHHHHH HAGLVDGDRFFYFTTCGWMMWNWLVSGLASGATLLLYDGSPFYPDGNVLFDFVDAEKMTF HCCEECCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEE FGTSAKFIDSVRKAGLKPIRSHDLSTVRAISSTGSPLSPEDFRFVYEGIKKDVHLASVSG ECCCHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCC GTDIVSCFVLGVPNQPVWTGEIQGPGLGLAVDVWDDDGKPIRQEKGELVCTKAFPSMPIG CHHEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCHHCCCCEEEEECCCCCCCC FWNDPEGKKYQAAYFERFDNVWCHGDFAEWTAHGGMIIHGRSDATLNPGGVRIGTAEIYN CCCCCCCCCCHHHHHHHHCCCEECCCHHHHHCCCCEEEECCCCCEECCCCEEECHHHHHH QVEQMPEILEALCIGQDFDNDVRVVLFVRLAAGVELDEDLEKRIRAKIRSGASPRHVPAR HHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEE IVAVTDIPRTKSGKITELAVRDVVHGRAIKNKEALANPEALELFRNLPQLAE EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCHHHCC >Mature Secondary Structure AAEVPLWTPTQDRIDASPLTAFLKAAEAKAGATFASYADLHRWSVEDREGFWSLVWDFC CCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH GIAGEKGERLLADGDKMPGASFFPDATLNFAENLLKKTGAGEAIVFRGEDKVERRLSWNQ CCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH LHGLVSRLQQLFLSLKVKKGDRIAAMMPNMPETVAAMLAAASIGAVWSSCSPDFGEQGVL HHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH DRFGQIEPVIFIGPDGYWYNGKAIEVADKVAAVAAKLGSVRKVLLVDYLGTSADVAATID HHCCCCCEEEEECCCCEEECCEEEHHHHHHHHHHHHHHHHHHEEEEHHCCCCCHHHHHHH KAVAMEEALSPFAAKPVSFEPLPFSHPLYILFSSGTTGIPKCIVHSAGGTLIQHVKEHRL HHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCHHHHHHHHHHH HAGLVDGDRFFYFTTCGWMMWNWLVSGLASGATLLLYDGSPFYPDGNVLFDFVDAEKMTF HCCEECCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEE FGTSAKFIDSVRKAGLKPIRSHDLSTVRAISSTGSPLSPEDFRFVYEGIKKDVHLASVSG ECCCHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCC GTDIVSCFVLGVPNQPVWTGEIQGPGLGLAVDVWDDDGKPIRQEKGELVCTKAFPSMPIG CHHEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCHHCCCCEEEEECCCCCCCC FWNDPEGKKYQAAYFERFDNVWCHGDFAEWTAHGGMIIHGRSDATLNPGGVRIGTAEIYN CCCCCCCCCCHHHHHHHHCCCEECCCHHHHHCCCCEEEECCCCCEECCCCEEECHHHHHH QVEQMPEILEALCIGQDFDNDVRVVLFVRLAAGVELDEDLEKRIRAKIRSGASPRHVPAR HHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEE IVAVTDIPRTKSGKITELAVRDVVHGRAIKNKEALANPEALELFRNLPQLAE EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]