| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475438
Identifier: 13475438
GI number: 13475438
Start: 5313919
End: 5315214
Strand: Reverse
Name: 13475438
Synonym: mll6504
Alternate gene names: NA
Gene position: 5315214-5313919 (Counterclockwise)
Preceding gene: 13475443
Following gene: 13475434
Centisome position: 75.54
GC content: 63.66
Gene sequence:
>1296_bases ATGACCGAAGCTCGCGGCATACCGCAAAGGCGTAGTTTCGCCCGGATCGGCACTTTCGTGGCCGAGCGACGGGGGCTGGT GCGCGACTATTTTTCGGCGATCAGCGGCGCCGGCGGGCGGCTGGTGTTTTCGCTGGCCTATTTCATCGCCCTCGCCAACA CTTTGTCGATCTCCGAATTCGGCATGTTCGCCACCGCCTCGGCGGCCGGTGTGATGCTGTCGCGGATCCTGGCCTTCGGT TTCATCTCGGCGCTCTACCGCACCGCCACCATCCGCCCCAATCTGATCGGCACCTTCACAGCCGGCTTCCTGCTGCTCGG CATCGTTTCGCTGCCGCTCCTGGCGTTGGCCTCGTTCGGGGTCTACCTGATCTTCTTTGCCGGCACCGTGCCGCTGTCGG TGTTTTCGGCGATCGTATTTGCCGAAGCGCTTTTGTGGCGCCCGGTCGAGGTGGCGCTGATCGTCAATAACGGGCTGGGC AAATTCGGGCGCGCCGCGATCCTGGCGATCCTGGCGACGGCACTGCGGGCGCTTGGCGCGGTGCTGTTCATGGTTTCGGC GCAGCACAGCATCTGGGTGTGGTCTTGGTTCTATATCGGCGCCAACGCTGCCTCGCTGGTTCTGGCTTTTGGCTGGTTCT ATCCACGCCAAAGACTGCGGCTGCGCATCGAGCTCTATCTCAGGCGGCTGGCCGATTCCATTTACGTCGCCGGCGCGGAA GTGTTGTTCTACCTGCAATCGGAATTCGACAAGCTGCTGGTGCTGGCGATCGGCGGCCCGCATCTGGCCGGCATCTACGC CATCATCATGCGGCTGGTCGACCTGACCGCGATCCCGATCCGCACCTTCTCGATGATGCTGGTGCAACGCATGATGCGCG CGCCGGACCTGTTGTCGCGGCTGGCGGTCAAGAGCGGCATCGAGGGCGGCGTGTTCGCCGTTTCGACGCTGGCGCTGCTG GCGCTCGGCATCGTGCTGCACTTCTTCCCCAACGCTCTCGGCAGAAACGTCTCCGAGGCCGCGCCGCTGGTGGCGCTGGC AATCTGCGTTCCGGGATTGCGCAATCTGGTCGAATACCAGGCCGAGCTTCTGTTCGCCCGCGGCCAGACGGCGGTACGGG CGCTCAATCTCGGCCTGCTCGCCGCCCTGAAGGCGCTGCTTTTGACCTATGTGCTGACCACCATCTCCGACACCTCGGAG CTGGTGCTGTCGCTCAACATCGTCTTCCTGCTGCTCTATCTCGCCTCGATGCTGCTGACTTATTCGGCGCTGCGCAGGCC GGCGAAAGCAATCTGA
Upstream 100 bases:
>100_bases GCCGGCGTGTAAGCCTTCCATAACCTCAAGTGCCGGAACTTCAGCGCATCCGGGCCTCAGAACGGCACGTTAAGCTTTCC CGCCTATGGCTTCCCGGCAC
Downstream 100 bases:
>100_bases ATTCAGGTGACGCCGGCCTGCAAACAGCGGCTCCCTGCGCTTCCGGTGCTCACGTACCGTAGTACGCTCCGCTCCGGTTC TCGGAAGCCACTGTTTTCGG
Product: succinoglycan biosynthesis transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTEARGIPQRRSFARIGTFVAERRGLVRDYFSAISGAGGRLVFSLAYFIALANTLSISEFGMFATASAAGVMLSRILAFG FISALYRTATIRPNLIGTFTAGFLLLGIVSLPLLALASFGVYLIFFAGTVPLSVFSAIVFAEALLWRPVEVALIVNNGLG KFGRAAILAILATALRALGAVLFMVSAQHSIWVWSWFYIGANAASLVLAFGWFYPRQRLRLRIELYLRRLADSIYVAGAE VLFYLQSEFDKLLVLAIGGPHLAGIYAIIMRLVDLTAIPIRTFSMMLVQRMMRAPDLLSRLAVKSGIEGGVFAVSTLALL ALGIVLHFFPNALGRNVSEAAPLVALAICVPGLRNLVEYQAELLFARGQTAVRALNLGLLAALKALLLTYVLTTISDTSE LVLSLNIVFLLLYLASMLLTYSALRRPAKAI
Sequences:
>Translated_431_residues MTEARGIPQRRSFARIGTFVAERRGLVRDYFSAISGAGGRLVFSLAYFIALANTLSISEFGMFATASAAGVMLSRILAFG FISALYRTATIRPNLIGTFTAGFLLLGIVSLPLLALASFGVYLIFFAGTVPLSVFSAIVFAEALLWRPVEVALIVNNGLG KFGRAAILAILATALRALGAVLFMVSAQHSIWVWSWFYIGANAASLVLAFGWFYPRQRLRLRIELYLRRLADSIYVAGAE VLFYLQSEFDKLLVLAIGGPHLAGIYAIIMRLVDLTAIPIRTFSMMLVQRMMRAPDLLSRLAVKSGIEGGVFAVSTLALL ALGIVLHFFPNALGRNVSEAAPLVALAICVPGLRNLVEYQAELLFARGQTAVRALNLGLLAALKALLLTYVLTTISDTSE LVLSLNIVFLLLYLASMLLTYSALRRPAKAI >Mature_430_residues TEARGIPQRRSFARIGTFVAERRGLVRDYFSAISGAGGRLVFSLAYFIALANTLSISEFGMFATASAAGVMLSRILAFGF ISALYRTATIRPNLIGTFTAGFLLLGIVSLPLLALASFGVYLIFFAGTVPLSVFSAIVFAEALLWRPVEVALIVNNGLGK FGRAAILAILATALRALGAVLFMVSAQHSIWVWSWFYIGANAASLVLAFGWFYPRQRLRLRIELYLRRLADSIYVAGAEV LFYLQSEFDKLLVLAIGGPHLAGIYAIIMRLVDLTAIPIRTFSMMLVQRMMRAPDLLSRLAVKSGIEGGVFAVSTLALLA LGIVLHFFPNALGRNVSEAAPLVALAICVPGLRNLVEYQAELLFARGQTAVRALNLGLLAALKALLLTYVLTTISDTSEL VLSLNIVFLLLYLASMLLTYSALRRPAKAI
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46724; Mature: 46592
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEARGIPQRRSFARIGTFVAERRGLVRDYFSAISGAGGRLVFSLAYFIALANTLSISEF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GMFATASAAGVMLSRILAFGFISALYRTATIRPNLIGTFTAGFLLLGIVSLPLLALASFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VYLIFFAGTVPLSVFSAIVFAEALLWRPVEVALIVNNGLGKFGRAAILAILATALRALGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH VLFMVSAQHSIWVWSWFYIGANAASLVLAFGWFYPRQRLRLRIELYLRRLADSIYVAGAE HHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH VLFYLQSEFDKLLVLAIGGPHLAGIYAIIMRLVDLTAIPIRTFSMMLVQRMMRAPDLLSR HHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LAVKSGIEGGVFAVSTLALLALGIVLHFFPNALGRNVSEAAPLVALAICVPGLRNLVEYQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AELLFARGQTAVRALNLGLLAALKALLLTYVLTTISDTSELVLSLNIVFLLLYLASMLLT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YSALRRPAKAI HHHHHCCCCCC >Mature Secondary Structure TEARGIPQRRSFARIGTFVAERRGLVRDYFSAISGAGGRLVFSLAYFIALANTLSISEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GMFATASAAGVMLSRILAFGFISALYRTATIRPNLIGTFTAGFLLLGIVSLPLLALASFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VYLIFFAGTVPLSVFSAIVFAEALLWRPVEVALIVNNGLGKFGRAAILAILATALRALGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH VLFMVSAQHSIWVWSWFYIGANAASLVLAFGWFYPRQRLRLRIELYLRRLADSIYVAGAE HHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH VLFYLQSEFDKLLVLAIGGPHLAGIYAIIMRLVDLTAIPIRTFSMMLVQRMMRAPDLLSR HHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LAVKSGIEGGVFAVSTLALLALGIVLHFFPNALGRNVSEAAPLVALAICVPGLRNLVEYQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AELLFARGQTAVRALNLGLLAALKALLLTYVLTTISDTSELVLSLNIVFLLLYLASMLLT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YSALRRPAKAI HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA