| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475434
Identifier: 13475434
GI number: 13475434
Start: 5309737
End: 5310777
Strand: Reverse
Name: 13475434
Synonym: mll6500
Alternate gene names: NA
Gene position: 5310777-5309737 (Counterclockwise)
Preceding gene: 13475438
Following gene: 13475433
Centisome position: 75.48
GC content: 65.71
Gene sequence:
>1041_bases GTGGTGCTACCAGAACGCGACTCACCATGTGGCTGGACACGGATGATCCCTTTGCCATCGGATGGTTCGGTATCGATCGC TGGACGGTCTCCCCGGCTTAACGTGGAGGCTGTCGAAGCGGTCGTCACCTTGCCGACCTTCAAGCGCCCCGAACAGGTGC TCGACACGCTGGCTTCGCTGCGCGCACAGCGGACCGGCAGGCGCTTTGCCGTCATCGTCATGGAGAACGAAGCCGAGGTG CGGGAAGGCGCCAAGGCGGTGCTGCCGCTGTTCGAGCGCGGCGAGATGCCAGGCATGGTCATCGTCGCGCAGGAGCGCGG CAATTGCAGCGCCTACAATGCGGGCTGGCAGACGGCGATGCTGCACTTTCCGAACTTCAGGCATCTGCTGGTCATCGACG ATGACGAGATCGCCGATCCGCATTGGCTGGAACGCATGTGCATGGCTGCCGAGACGCTCGGCGCCGACATCGTCGGCGGC CCGCAAGTGCCTGTCTTCGCAGACGCTGCACATGCGAGATGGGCCGAGCATCCGGTGTTCGCGCCGCCCTACCGGGAAAC CGGGCGCGTGCCGGCGCTCTATTCGTCCGGCAATCTTCTGGTCGGGCGCAACGTGCTGGTCGCCATGGAGCCGCCCTTCC TCGACCTGAAATTCAACTTCATGGGCGGCGGCGATTCTGACTTTCTCAGCCGGGCGGTGCAGAATGGCTTTGTGCTCGGC TGGTGCGCCGAGGCCAAGGTTCGCGAGACCGTCCCGGCGCGGCGTGTCGAGCCCGACTGGATCCGGGCCCGCAGCTTGCG CAACGGCGTGATCTCGACTCTGGTCGAGAAGAAGAAGCGCGCCGGCACGCCGCTGGCCGGCGCCGAGGTGCTAGCGAAGA GCCTGGCGCTGCTGGCTGCCGCACCGTTTCGCGGCCTGATCCGGCTGGCGCGCACAGGATCGCCGGCGATTGCCATCTAC CCCGTCCATGTGGCGCTCGGCCGCGTGCTGGCCGAATTCGGATATGCCAATGAGCAGTATCGCCAGCCCGAGAAAAACTG A
Upstream 100 bases:
>100_bases AAAGCGCGGTGAACCCTTGATTAAGCGAGCACAATCAACGGCCGAAAGCCCCTGCCCGACGGGCCTCTCCGTGCAAGGTG ATTAACGAAACCTTATCACC
Downstream 100 bases:
>100_bases GCGCGTACCGCTCAGCGACGCGTTCACGCGCGACGGCGTGGCGACCGCCATCGCCGCACTGCTGTTCAGCGTCATCATGG TGTCCTTTCGCCCGTTCCAG
Product: UDP-hexose transferase
Products: NA
Alternate protein names: UDP-Hexose Transferase; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Protein; Family Glycosyltransferase; Capsular Polysaccharide Biosynthesis Glycosyl Transferase
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MVLPERDSPCGWTRMIPLPSDGSVSIAGRSPRLNVEAVEAVVTLPTFKRPEQVLDTLASLRAQRTGRRFAVIVMENEAEV REGAKAVLPLFERGEMPGMVIVAQERGNCSAYNAGWQTAMLHFPNFRHLLVIDDDEIADPHWLERMCMAAETLGADIVGG PQVPVFADAAHARWAEHPVFAPPYRETGRVPALYSSGNLLVGRNVLVAMEPPFLDLKFNFMGGGDSDFLSRAVQNGFVLG WCAEAKVRETVPARRVEPDWIRARSLRNGVISTLVEKKKRAGTPLAGAEVLAKSLALLAAAPFRGLIRLARTGSPAIAIY PVHVALGRVLAEFGYANEQYRQPEKN
Sequences:
>Translated_346_residues MVLPERDSPCGWTRMIPLPSDGSVSIAGRSPRLNVEAVEAVVTLPTFKRPEQVLDTLASLRAQRTGRRFAVIVMENEAEV REGAKAVLPLFERGEMPGMVIVAQERGNCSAYNAGWQTAMLHFPNFRHLLVIDDDEIADPHWLERMCMAAETLGADIVGG PQVPVFADAAHARWAEHPVFAPPYRETGRVPALYSSGNLLVGRNVLVAMEPPFLDLKFNFMGGGDSDFLSRAVQNGFVLG WCAEAKVRETVPARRVEPDWIRARSLRNGVISTLVEKKKRAGTPLAGAEVLAKSLALLAAAPFRGLIRLARTGSPAIAIY PVHVALGRVLAEFGYANEQYRQPEKN >Mature_346_residues MVLPERDSPCGWTRMIPLPSDGSVSIAGRSPRLNVEAVEAVVTLPTFKRPEQVLDTLASLRAQRTGRRFAVIVMENEAEV REGAKAVLPLFERGEMPGMVIVAQERGNCSAYNAGWQTAMLHFPNFRHLLVIDDDEIADPHWLERMCMAAETLGADIVGG PQVPVFADAAHARWAEHPVFAPPYRETGRVPALYSSGNLLVGRNVLVAMEPPFLDLKFNFMGGGDSDFLSRAVQNGFVLG WCAEAKVRETVPARRVEPDWIRARSLRNGVISTLVEKKKRAGTPLAGAEVLAKSLALLAAAPFRGLIRLARTGSPAIAIY PVHVALGRVLAEFGYANEQYRQPEKN
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37912; Mature: 37912
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPERDSPCGWTRMIPLPSDGSVSIAGRSPRLNVEAVEAVVTLPTFKRPEQVLDTLASL CCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHH RAQRTGRRFAVIVMENEAEVREGAKAVLPLFERGEMPGMVIVAQERGNCSAYNAGWQTAM HHHHCCCEEEEEEECCCHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCEEE LHFPNFRHLLVIDDDEIADPHWLERMCMAAETLGADIVGGPQVPVFADAAHARWAEHPVF EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCCCCCC APPYRETGRVPALYSSGNLLVGRNVLVAMEPPFLDLKFNFMGGGDSDFLSRAVQNGFVLG CCCCHHCCCCCEEECCCCEEEECCEEEEECCCEEEEEEEEECCCCHHHHHHHHHCCEEEE WCAEAKVRETVPARRVEPDWIRARSLRNGVISTLVEKKKRAGTPLAGAEVLAKSLALLAA EECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH APFRGLIRLARTGSPAIAIYPVHVALGRVLAEFGYANEQYRQPEKN HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHCCCCCC >Mature Secondary Structure MVLPERDSPCGWTRMIPLPSDGSVSIAGRSPRLNVEAVEAVVTLPTFKRPEQVLDTLASL CCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHH RAQRTGRRFAVIVMENEAEVREGAKAVLPLFERGEMPGMVIVAQERGNCSAYNAGWQTAM HHHHCCCEEEEEEECCCHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCEEE LHFPNFRHLLVIDDDEIADPHWLERMCMAAETLGADIVGGPQVPVFADAAHARWAEHPVF EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCCCCCC APPYRETGRVPALYSSGNLLVGRNVLVAMEPPFLDLKFNFMGGGDSDFLSRAVQNGFVLG CCCCHHCCCCCEEECCCCEEEECCEEEEECCCEEEEEEEEECCCCHHHHHHHHHCCEEEE WCAEAKVRETVPARRVEPDWIRARSLRNGVISTLVEKKKRAGTPLAGAEVLAKSLALLAA EECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH APFRGLIRLARTGSPAIAIYPVHVALGRVLAEFGYANEQYRQPEKN HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA