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The map label for this gene is 13475421

Identifier: 13475421

GI number: 13475421

Start: 5295605

End: 5296576

Strand: Direct

Name: 13475421

Synonym: mlr6484

Alternate gene names: NA

Gene position: 5295605-5296576 (Clockwise)

Preceding gene: 13475420

Following gene: 13475422

Centisome position: 75.26

GC content: 56.48

Gene sequence:

>972_bases
ATGCCGACCGGTCAGACCCTCCTCTACTTCATCTATGTGCTGGCGGCGGCATCCGTTATTCTCGCCGCCGAATCCTTCTT
TCTCTCAATCGCCGGACGGCGAGCGCGGGCAGGCATCATAAATCGACGCTTGCAGCGCCTGGGAGAAGAGAAGCCGGCCG
AGCAGAGTCTGCAGGGACTGCTGCAGGAACGCGGATTGACGGCATCGGGGGACTTCATTTTCGGCGCAATCACCCTCAAC
CGGCTCTATACGCAATCCGGCATCACCGGCAATCCACTGGCGTTCCTTGCTGTATTCCTGCTCGCCGGCCTCGTTTTGGC
GCTCCTTTTGCCGTTGCTTCTGCACTTTTCCATCATTGTCGCCGTCATTGTCTTCCTGATTGTGGGATTTGTTCTACCGA
TTCTCGTTTTACGAAGCGCCCGGGACAAACGAATCAAGAAATTTGCGGTCCAGCTTCCCGATGCACTCGATATGATCGTG
CGCTCTCTGCGCGCCGGTCACCCAACGACCGTCGCGATCGCGCTGGTTGCTCGTGAAATGCCCGATCCGCTCGGCACTGA
ATTCGGCATCGTTTCCGACGAAATAAGTTTCGGCCTCAGTCTGGAGCAGGCTGTTCGAAAATTGTCCGAGCGGGTCGGCT
TCGAGGGTCTGCATCTGCTGTCGGTTTCGCTCTCCATCCAGGCCAAGACCGGCGGTAATCTCACCGAGATACTGTCGAAC
CTGTCGTCGGTGTTGCGTGAACGCCGGAAATTGCGGATGAAGATCAGGGCGCTGTCGGCCGAGGGTCGCATGTCGGCCTG
GATAATCTCGCTGTTTCCACTTCTGATGCTTGGCGTTCTGTCGATCGCCGCTCCAAGCTTTTACGGTGACGTCTGGGGTA
ACCCTATCGTTGTACCGGTGTTTGTGATCTTTGGATCTTGGGCACTGTTGGGCGACTTCATAATGTACCGAATGGTCAAC
TTCGATTTCTAG

Upstream 100 bases:

>100_bases
AATTTCGCGCCACCGGTGTACGGCCGCGTTTTGCCACTGAAGCCGCGGCAATGGGGTATCATTTCGCAAAAGATGCGTTC
AATCCGCAGGTTCCACTTTG

Downstream 100 bases:

>100_bases
TGGCGGACAGGGACGTGTTTACCAATCTAGGGAATTCAGCCACGCTGTTGTCGCTCGCTATCTTCCTAGCGGCAGTGGCG
CTTTTTTTGCTGGCCGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Flp Pilus Assembly Protein Tadb; Tight Adherence TadB Related Transmembrane Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Bacterial Type II Secretion System Protein F; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPTGQTLLYFIYVLAAASVILAAESFFLSIAGRRARAGIINRRLQRLGEEKPAEQSLQGLLQERGLTASGDFIFGAITLN
RLYTQSGITGNPLAFLAVFLLAGLVLALLLPLLLHFSIIVAVIVFLIVGFVLPILVLRSARDKRIKKFAVQLPDALDMIV
RSLRAGHPTTVAIALVAREMPDPLGTEFGIVSDEISFGLSLEQAVRKLSERVGFEGLHLLSVSLSIQAKTGGNLTEILSN
LSSVLRERRKLRMKIRALSAEGRMSAWIISLFPLLMLGVLSIAAPSFYGDVWGNPIVVPVFVIFGSWALLGDFIMYRMVN
FDF

Sequences:

>Translated_323_residues
MPTGQTLLYFIYVLAAASVILAAESFFLSIAGRRARAGIINRRLQRLGEEKPAEQSLQGLLQERGLTASGDFIFGAITLN
RLYTQSGITGNPLAFLAVFLLAGLVLALLLPLLLHFSIIVAVIVFLIVGFVLPILVLRSARDKRIKKFAVQLPDALDMIV
RSLRAGHPTTVAIALVAREMPDPLGTEFGIVSDEISFGLSLEQAVRKLSERVGFEGLHLLSVSLSIQAKTGGNLTEILSN
LSSVLRERRKLRMKIRALSAEGRMSAWIISLFPLLMLGVLSIAAPSFYGDVWGNPIVVPVFVIFGSWALLGDFIMYRMVN
FDF
>Mature_322_residues
PTGQTLLYFIYVLAAASVILAAESFFLSIAGRRARAGIINRRLQRLGEEKPAEQSLQGLLQERGLTASGDFIFGAITLNR
LYTQSGITGNPLAFLAVFLLAGLVLALLLPLLLHFSIIVAVIVFLIVGFVLPILVLRSARDKRIKKFAVQLPDALDMIVR
SLRAGHPTTVAIALVAREMPDPLGTEFGIVSDEISFGLSLEQAVRKLSERVGFEGLHLLSVSLSIQAKTGGNLTEILSNL
SSVLRERRKLRMKIRALSAEGRMSAWIISLFPLLMLGVLSIAAPSFYGDVWGNPIVVPVFVIFGSWALLGDFIMYRMVNF
DF

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35340; Mature: 35208

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGQTLLYFIYVLAAASVILAAESFFLSIAGRRARAGIINRRLQRLGEEKPAEQSLQGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
LQERGLTASGDFIFGAITLNRLYTQSGITGNPLAFLAVFLLAGLVLALLLPLLLHFSIIV
HHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIVFLIVGFVLPILVLRSARDKRIKKFAVQLPDALDMIVRSLRAGHPTTVAIALVAREM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHC
PDPLGTEFGIVSDEISFGLSLEQAVRKLSERVGFEGLHLLSVSLSIQAKTGGNLTEILSN
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCHHHHHHH
LSSVLRERRKLRMKIRALSAEGRMSAWIISLFPLLMLGVLSIAAPSFYGDVWGNPIVVPV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHH
FVIFGSWALLGDFIMYRMVNFDF
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTGQTLLYFIYVLAAASVILAAESFFLSIAGRRARAGIINRRLQRLGEEKPAEQSLQGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
LQERGLTASGDFIFGAITLNRLYTQSGITGNPLAFLAVFLLAGLVLALLLPLLLHFSIIV
HHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIVFLIVGFVLPILVLRSARDKRIKKFAVQLPDALDMIVRSLRAGHPTTVAIALVAREM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHC
PDPLGTEFGIVSDEISFGLSLEQAVRKLSERVGFEGLHLLSVSLSIQAKTGGNLTEILSN
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCHHHHHHH
LSSVLRERRKLRMKIRALSAEGRMSAWIISLFPLLMLGVLSIAAPSFYGDVWGNPIVVPV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHH
FVIFGSWALLGDFIMYRMVNFDF
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA