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The map label for this gene is ycjS [C]

Identifier: 13475387

GI number: 13475387

Start: 5261312

End: 5263345

Strand: Direct

Name: ycjS [C]

Synonym: mlr6441

Alternate gene names: 13475387

Gene position: 5261312-5263345 (Clockwise)

Preceding gene: 13475386

Following gene: 13475389

Centisome position: 74.78

GC content: 65.98

Gene sequence:

>2034_bases
ATGACAATGACCGCAACCACGCCCATTCGCTGGGGCATTCTCGGCCCGGGCAGCATCGCTCAGGCCTTCGCCGGCGGCGT
GGCCGCTTCGCGCACCGGAAAACTGGTCGCCATCGGCGCGCGCAATCCCGGCAAGCCAGGCCTCGCCGAAGCCTTTCCCG
GCGCTCGCATCGTCGACGGCTATGAAGCGCTGCTTGCCGATCCCGACATCGATGCCGTCTACATCGCGATCCCGCATCCT
GGCCACGCACAATGGGCGATCAGGGCGGCGGAAGCGGGCAAGCACGTGCTGTGCGAAAAGCCGCTGGCGCTGACCGCCTT
CGAGGCCGACGCCATGTTCCATGCCGCGCGCAAGGCCGGCACTTTTCTGGGCGAAGCCTTCATGTACCGGCTGCATCCGC
AGACGCTGAAGCTGGTGGAACTGATCCGGTCCGGCGTCATCGGCGAGGTCAGGATGATCAAGTCGAGCTTCGGCTTCGCC
ATGCCGGGCTTCATGCCGCAGCATAGGCTCTATGCCAATGATTCCGCCGGCGGCGGCATACTGGACGTCGGCGGCTATAC
CGTCTCGATGGCGCGGCTGATTGCCGGGGCGGCGGCGGGCCTCCCCTTTGCCGAGCCCGACAAGGTGGTTGGTACCGCCC
ATCTTGGCCAGTCCGGCGTCGACGAATGGGCCTCGGCGCTGCTGCATTTTCCCGACGGCATCGTCGCCGAGGTTTCCTGC
AGCATCTCGCTGAACCAGGACAATGTGCTGCGCATTCTCGGCACCAAGGGTCGCATCGAAGTGCCGGACTTCTGGTTCGC
CGGGGGAAATCGCGATGTCGGCCTCGGCCGGATCGACGTGATCGGTGCCGATGGCTCGCGCGAGACGATCAGCGTCGATG
AAAAGCGCCATGTCTATTCCTTCGAGGTCGACGGCGCCGGCGAGGCCATCCTTGCCGGGCGGCAGGAGTTCGCTTGGCCG
GGCATGGATTGGGCCGACAGTCTCGGCACCTTGCGCGTGCTCGACAGATGGCGCGCTGCCGTCGGACTGGAGTACGAGAT
CGAGAAGGCCCAGCTGCGCACCAACACCATCTCCGGCCGGCCTCTGCGGTCCAGCGGCACGGCGATCGGCAAGCGCGCCA
TTCCGGGCCTGGCGAAGTCGGCGTCGGTGGTGGCGCTCGGCTTTGAGGATTTCCGCACCTTCTCCTCGGGCTCGATCCTG
CTGGATGCCTTCTTCGAGGCCGGCGGCAATCTGTTCGACACCGGTTTCGTCTACGGTGGCGGCTACACCGAGACGCTGCT
TGGCCAGTGGTTGCGGAACCGCGGCGTGCGCGAGCAGTCGGTGATCATCGCCAAGGGCGCGCATTCGCCGCTCTGCTATC
CCGACGTGATCGGCAAGCAGCTTGCCCAATCGCTCGACCGCCTGCAGACCGACCATGTCGACATCTATTTCATGCACCGC
GACAATCCGGATGTGCCGGTCGGCGAGTTCGTCGATGCCATGGACCTTGAGGTGAAGGCCGGTCGCATCCGTGGCCCGTT
CGGCGGTTCCAACTGGACGATGCAGCGCATGGACGAGGCGATTGCCTATGCCGAGCGCACCGGCAAGCAGAAGCCCGGCG
CGCTTTCCAACAATTTCTCGCTGGCCGAAATGCTGGAGCCGATCTGGGCGGGTTGTGTGGCTTCGTCCACCGACGACTGG
AAGGCCTGGCTGACATCCAGGCAGATGCCGAATTTCGCCTGGTCGAGCCAGGGCCGTGGCTTCTTCACCGAGCGCGCCGG
GCGCGACAGGCGCGACAGCGAGGAACTGGTGCGGGTCTGGTATTCGGAGCGCAATTTCGGCCGCCGCGACCGCGCCATCG
AGCTCGCCGCGCGACTGCGCAAGAGCCCGATCCACGTTGCGCTGGCCTATGTGCTCAACCAGCCTTTCCCGTCGGTCCCA
TTGATCGGGCCGCGCACGCTGGGCGAGTTGGAAGACAGTCTGCGGGCGCTGGACATCGCGCTTTCGCCTGCCGATCTCGA
GTGGCTGGACGGCGGCAGCCTGCACGCGGCCTGA

Upstream 100 bases:

>100_bases
AACCTCCGAGGTCACCGTTTCCATCCGCAAATCCTACCTGTTCGACGAAAAAGGGCTGCGGCTGCGCTGACCGGCCGCCC
CCTCCCAGCCTTCAAGGAGA

Downstream 100 bases:

>100_bases
TGGAACTCAAAGCGGCGTCAGGTCTCGTCGTCCGACACCCTGACGCCGCGCCTGGCCGGCGTTCGCAGATTGGCATACAT
GCCGGTGGTGCGGAATTGGC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 676

Protein sequence:

>677_residues
MTMTATTPIRWGILGPGSIAQAFAGGVAASRTGKLVAIGARNPGKPGLAEAFPGARIVDGYEALLADPDIDAVYIAIPHP
GHAQWAIRAAEAGKHVLCEKPLALTAFEADAMFHAARKAGTFLGEAFMYRLHPQTLKLVELIRSGVIGEVRMIKSSFGFA
MPGFMPQHRLYANDSAGGGILDVGGYTVSMARLIAGAAAGLPFAEPDKVVGTAHLGQSGVDEWASALLHFPDGIVAEVSC
SISLNQDNVLRILGTKGRIEVPDFWFAGGNRDVGLGRIDVIGADGSRETISVDEKRHVYSFEVDGAGEAILAGRQEFAWP
GMDWADSLGTLRVLDRWRAAVGLEYEIEKAQLRTNTISGRPLRSSGTAIGKRAIPGLAKSASVVALGFEDFRTFSSGSIL
LDAFFEAGGNLFDTGFVYGGGYTETLLGQWLRNRGVREQSVIIAKGAHSPLCYPDVIGKQLAQSLDRLQTDHVDIYFMHR
DNPDVPVGEFVDAMDLEVKAGRIRGPFGGSNWTMQRMDEAIAYAERTGKQKPGALSNNFSLAEMLEPIWAGCVASSTDDW
KAWLTSRQMPNFAWSSQGRGFFTERAGRDRRDSEELVRVWYSERNFGRRDRAIELAARLRKSPIHVALAYVLNQPFPSVP
LIGPRTLGELEDSLRALDIALSPADLEWLDGGSLHAA

Sequences:

>Translated_677_residues
MTMTATTPIRWGILGPGSIAQAFAGGVAASRTGKLVAIGARNPGKPGLAEAFPGARIVDGYEALLADPDIDAVYIAIPHP
GHAQWAIRAAEAGKHVLCEKPLALTAFEADAMFHAARKAGTFLGEAFMYRLHPQTLKLVELIRSGVIGEVRMIKSSFGFA
MPGFMPQHRLYANDSAGGGILDVGGYTVSMARLIAGAAAGLPFAEPDKVVGTAHLGQSGVDEWASALLHFPDGIVAEVSC
SISLNQDNVLRILGTKGRIEVPDFWFAGGNRDVGLGRIDVIGADGSRETISVDEKRHVYSFEVDGAGEAILAGRQEFAWP
GMDWADSLGTLRVLDRWRAAVGLEYEIEKAQLRTNTISGRPLRSSGTAIGKRAIPGLAKSASVVALGFEDFRTFSSGSIL
LDAFFEAGGNLFDTGFVYGGGYTETLLGQWLRNRGVREQSVIIAKGAHSPLCYPDVIGKQLAQSLDRLQTDHVDIYFMHR
DNPDVPVGEFVDAMDLEVKAGRIRGPFGGSNWTMQRMDEAIAYAERTGKQKPGALSNNFSLAEMLEPIWAGCVASSTDDW
KAWLTSRQMPNFAWSSQGRGFFTERAGRDRRDSEELVRVWYSERNFGRRDRAIELAARLRKSPIHVALAYVLNQPFPSVP
LIGPRTLGELEDSLRALDIALSPADLEWLDGGSLHAA
>Mature_676_residues
TMTATTPIRWGILGPGSIAQAFAGGVAASRTGKLVAIGARNPGKPGLAEAFPGARIVDGYEALLADPDIDAVYIAIPHPG
HAQWAIRAAEAGKHVLCEKPLALTAFEADAMFHAARKAGTFLGEAFMYRLHPQTLKLVELIRSGVIGEVRMIKSSFGFAM
PGFMPQHRLYANDSAGGGILDVGGYTVSMARLIAGAAAGLPFAEPDKVVGTAHLGQSGVDEWASALLHFPDGIVAEVSCS
ISLNQDNVLRILGTKGRIEVPDFWFAGGNRDVGLGRIDVIGADGSRETISVDEKRHVYSFEVDGAGEAILAGRQEFAWPG
MDWADSLGTLRVLDRWRAAVGLEYEIEKAQLRTNTISGRPLRSSGTAIGKRAIPGLAKSASVVALGFEDFRTFSSGSILL
DAFFEAGGNLFDTGFVYGGGYTETLLGQWLRNRGVREQSVIIAKGAHSPLCYPDVIGKQLAQSLDRLQTDHVDIYFMHRD
NPDVPVGEFVDAMDLEVKAGRIRGPFGGSNWTMQRMDEAIAYAERTGKQKPGALSNNFSLAEMLEPIWAGCVASSTDDWK
AWLTSRQMPNFAWSSQGRGFFTERAGRDRRDSEELVRVWYSERNFGRRDRAIELAARLRKSPIHVALAYVLNQPFPSVPL
IGPRTLGELEDSLRALDIALSPADLEWLDGGSLHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=256, Percent_Identity=28.90625, Blast_Score=119, Evalue=8e-27,
Organism=Escherichia coli, GI1787574, Length=239, Percent_Identity=28.4518828451883, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI87081735, Length=282, Percent_Identity=27.3049645390071, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI145693182, Length=234, Percent_Identity=28.6324786324786, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081947, Length=161, Percent_Identity=30.4347826086957, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581117, Length=339, Percent_Identity=29.7935103244838, Blast_Score=136, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24581115, Length=270, Percent_Identity=30, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24584727, Length=261, Percent_Identity=26.4367816091954, Blast_Score=79, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 73183; Mature: 73052

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTATTPIRWGILGPGSIAQAFAGGVAASRTGKLVAIGARNPGKPGLAEAFPGARIVDG
CCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEECC
YEALLADPDIDAVYIAIPHPGHAQWAIRAAEAGKHVLCEKPLALTAFEADAMFHAARKAG
HHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHH
TFLGEAFMYRLHPQTLKLVELIRSGVIGEVRMIKSSFGFAMPGFMPQHRLYANDSAGGGI
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCE
LDVGGYTVSMARLIAGAAAGLPFAEPDKVVGTAHLGQSGVDEWASALLHFPDGIVAEVSC
EECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHHCCCCEEEEEEE
SISLNQDNVLRILGTKGRIEVPDFWFAGGNRDVGLGRIDVIGADGSRETISVDEKRHVYS
EEEECCCCEEEEECCCCCEECCCEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEE
FEVDGAGEAILAGRQEFAWPGMDWADSLGTLRVLDRWRAAVGLEYEIEKAQLRTNTISGR
EEECCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHEECCCCCC
PLRSSGTAIGKRAIPGLAKSASVVALGFEDFRTFSSGSILLDAFFEAGGNLFDTGFVYGG
CCCCCCCHHHHHHCCCCCCCCCEEEECHHHHHCCCCCCEEEEEHHHCCCCEEECCEEECC
GYTETLLGQWLRNRGVREQSVIIAKGAHSPLCYPDVIGKQLAQSLDRLQTDHVDIYFMHR
CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
DNPDVPVGEFVDAMDLEVKAGRIRGPFGGSNWTMQRMDEAIAYAERTGKQKPGALSNNFS
CCCCCCHHHHHHHHCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LAEMLEPIWAGCVASSTDDWKAWLTSRQMPNFAWSSQGRGFFTERAGRDRRDSEELVRVW
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCHHHHHHHH
YSERNFGRRDRAIELAARLRKSPIHVALAYVLNQPFPSVPLIGPRTLGELEDSLRALDIA
HHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEE
LSPADLEWLDGGSLHAA
ECCCCCEECCCCCCCCC
>Mature Secondary Structure 
TMTATTPIRWGILGPGSIAQAFAGGVAASRTGKLVAIGARNPGKPGLAEAFPGARIVDG
CCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEECC
YEALLADPDIDAVYIAIPHPGHAQWAIRAAEAGKHVLCEKPLALTAFEADAMFHAARKAG
HHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHH
TFLGEAFMYRLHPQTLKLVELIRSGVIGEVRMIKSSFGFAMPGFMPQHRLYANDSAGGGI
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCE
LDVGGYTVSMARLIAGAAAGLPFAEPDKVVGTAHLGQSGVDEWASALLHFPDGIVAEVSC
EECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHHCCCCEEEEEEE
SISLNQDNVLRILGTKGRIEVPDFWFAGGNRDVGLGRIDVIGADGSRETISVDEKRHVYS
EEEECCCCEEEEECCCCCEECCCEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEE
FEVDGAGEAILAGRQEFAWPGMDWADSLGTLRVLDRWRAAVGLEYEIEKAQLRTNTISGR
EEECCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHEECCCCCC
PLRSSGTAIGKRAIPGLAKSASVVALGFEDFRTFSSGSILLDAFFEAGGNLFDTGFVYGG
CCCCCCCHHHHHHCCCCCCCCCEEEECHHHHHCCCCCCEEEEEHHHCCCCEEECCEEECC
GYTETLLGQWLRNRGVREQSVIIAKGAHSPLCYPDVIGKQLAQSLDRLQTDHVDIYFMHR
CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
DNPDVPVGEFVDAMDLEVKAGRIRGPFGGSNWTMQRMDEAIAYAERTGKQKPGALSNNFS
CCCCCCHHHHHHHHCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LAEMLEPIWAGCVASSTDDWKAWLTSRQMPNFAWSSQGRGFFTERAGRDRRDSEELVRVW
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCHHHHHHHH
YSERNFGRRDRAIELAARLRKSPIHVALAYVLNQPFPSVPLIGPRTLGELEDSLRALDIA
HHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEE
LSPADLEWLDGGSLHAA
ECCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]