| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475379
Identifier: 13475379
GI number: 13475379
Start: 5251782
End: 5252975
Strand: Reverse
Name: 13475379
Synonym: mll6430
Alternate gene names: NA
Gene position: 5252975-5251782 (Counterclockwise)
Preceding gene: 13475380
Following gene: 13475376
Centisome position: 74.66
GC content: 68.17
Gene sequence:
>1194_bases GTGCGCGCCTCGATCGAGGTTGCCGACATCTTCCGCGCAGCAGGGCCCGCCTACCGGGCCGCTCATGCCGGGCATCTGAG CCTCGCCGAGCTCAAGGTCATGTCGGCGATCGAGCACTGCCGCACTGCAGCCCTTGGCGGGCACGTGGAGGCCTGCGAGG ACTGCGGCCGGTGGCGCATCGCCTACAATTCCTGCCGCAACCGGCACTGCCCCAAGTGCCAGGGCGCGGCTGCACGGACA TGGCTCGCCGAGCGGGAAGCCGACCTGCTGCCGGTCGGCTACTTCCATGTCGTGTTCACGCTGCCGGCCGAAGTCGCCGA CATCGCCTTCCATAACAAGGCGCTCGTCTACGACCTGCTGTTCAAGGCGGCATCGGAGACGATGCTGACGATCGCGGCGG ATCCGAAGCATCTCGGCGCGCGCATCGGCATCACCGCCGTCCTTCACACCTGGGGCTCGGCGATGACGCACCATCCCCAC GTGCACATGATCGTGCCGGGTGGCGGCATCTCGCCGGACGGAAGCCGGTGGATATCGTCGCGTCCGGCCTTCCTGCTGCC AGTGCGCGTGCTCGGCAAGCTGTTCCGCCGCCTATTCCTCACCCGTCTGGTCGCGCTGCACGACGCCGGCCGGGTCAGCT TCTTCGGATCGATGGCGCACCTCACCGACCGGCGGGCCTTCCTGCGCCACCTCGCTCCCGTCAGGAGGAAGCGCTGGGTG GTCTACGCCAAGGCGCCCTTCGCCGGCCCGGAGGCGGTGCTCGCCTATCTGTCGCGCTACACGCACCGGGTCGCGATCTC GAACAGCCGCCTCATTCGCCTCGACGAAAGCGGCGTCACCTTCCGCTACAAGGACTATCGTCGCGACGGCGCCGACCGGC AGCAGCTCATGACGCTTGGCCCCGACGAGTTCATCCGCCGCTTCCTGCTCCATGTCTTGCCAAAGGGATTCCACCGCATC CGGCATTGCGGCCTGCTCGCCGGCTCCGCTCGCAAGGCCAGCCTCGCGCTTGCTCGTGAACTCCTGAACGTCGCCGTGCC GTCGGATGACGACACCACGAACGAGCCGGACGACTTCCGCCCGCCATGCCCCTGCTGTGGCGGCCGCATGATCGTGATCG AGGTGTTCGAACGATGGAGGCAGCCGCGTGGGCCGCCACACGGTTCCCCGTCGACCGGGACCAGCACGCCATGA
Upstream 100 bases:
>100_bases TCTACACCAAGGTTGCAACCCGCACGGTGCGCACCGTCACGAGCCCGCTCGACAAGCTTGGCCTCTTCAAGCCGGAAGAG CTCTCACCCGACGGCTGAGC
Downstream 100 bases:
>100_bases CCCGGCATGGAATGGTTCAGCCTTCAGCTGCAGGCACTCAGCCTCCGGCAACGGAGCAACGCACGTCTATGGTGATTATC GACTCCGACAGAACCGCGCC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRASIEVADIFRAAGPAYRAAHAGHLSLAELKVMSAIEHCRTAALGGHVEACEDCGRWRIAYNSCRNRHCPKCQGAAART WLAEREADLLPVGYFHVVFTLPAEVADIAFHNKALVYDLLFKAASETMLTIAADPKHLGARIGITAVLHTWGSAMTHHPH VHMIVPGGGISPDGSRWISSRPAFLLPVRVLGKLFRRLFLTRLVALHDAGRVSFFGSMAHLTDRRAFLRHLAPVRRKRWV VYAKAPFAGPEAVLAYLSRYTHRVAISNSRLIRLDESGVTFRYKDYRRDGADRQQLMTLGPDEFIRRFLLHVLPKGFHRI RHCGLLAGSARKASLALARELLNVAVPSDDDTTNEPDDFRPPCPCCGGRMIVIEVFERWRQPRGPPHGSPSTGTSTP
Sequences:
>Translated_397_residues MRASIEVADIFRAAGPAYRAAHAGHLSLAELKVMSAIEHCRTAALGGHVEACEDCGRWRIAYNSCRNRHCPKCQGAAART WLAEREADLLPVGYFHVVFTLPAEVADIAFHNKALVYDLLFKAASETMLTIAADPKHLGARIGITAVLHTWGSAMTHHPH VHMIVPGGGISPDGSRWISSRPAFLLPVRVLGKLFRRLFLTRLVALHDAGRVSFFGSMAHLTDRRAFLRHLAPVRRKRWV VYAKAPFAGPEAVLAYLSRYTHRVAISNSRLIRLDESGVTFRYKDYRRDGADRQQLMTLGPDEFIRRFLLHVLPKGFHRI RHCGLLAGSARKASLALARELLNVAVPSDDDTTNEPDDFRPPCPCCGGRMIVIEVFERWRQPRGPPHGSPSTGTSTP >Mature_397_residues MRASIEVADIFRAAGPAYRAAHAGHLSLAELKVMSAIEHCRTAALGGHVEACEDCGRWRIAYNSCRNRHCPKCQGAAART WLAEREADLLPVGYFHVVFTLPAEVADIAFHNKALVYDLLFKAASETMLTIAADPKHLGARIGITAVLHTWGSAMTHHPH VHMIVPGGGISPDGSRWISSRPAFLLPVRVLGKLFRRLFLTRLVALHDAGRVSFFGSMAHLTDRRAFLRHLAPVRRKRWV VYAKAPFAGPEAVLAYLSRYTHRVAISNSRLIRLDESGVTFRYKDYRRDGADRQQLMTLGPDEFIRRFLLHVLPKGFHRI RHCGLLAGSARKASLALARELLNVAVPSDDDTTNEPDDFRPPCPCCGGRMIVIEVFERWRQPRGPPHGSPSTGTSTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 44119; Mature: 44119
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASIEVADIFRAAGPAYRAAHAGHLSLAELKVMSAIEHCRTAALGGHVEACEDCGRWRI CCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEE AYNSCRNRHCPKCQGAAARTWLAEREADLLPVGYFHVVFTLPAEVADIAFHNKALVYDLL EHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHH FKAASETMLTIAADPKHLGARIGITAVLHTWGSAMTHHPHVHMIVPGGGISPDGSRWISS HHHHCCCEEEEECCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCC RPAFLLPVRVLGKLFRRLFLTRLVALHDAGRVSFFGSMAHLTDRRAFLRHLAPVRRKRWV CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VYAKAPFAGPEAVLAYLSRYTHRVAISNSRLIRLDESGVTFRYKDYRRDGADRQQLMTLG EEEECCCCCHHHHHHHHHHHHHEEEECCCEEEEECCCCCEEEEHHHHCCCCCHHHHHHCC PDEFIRRFLLHVLPKGFHRIRHCGLLAGSARKASLALARELLNVAVPSDDDTTNEPDDFR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PPCPCCGGRMIVIEVFERWRQPRGPPHGSPSTGTSTP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRASIEVADIFRAAGPAYRAAHAGHLSLAELKVMSAIEHCRTAALGGHVEACEDCGRWRI CCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEE AYNSCRNRHCPKCQGAAARTWLAEREADLLPVGYFHVVFTLPAEVADIAFHNKALVYDLL EHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHH FKAASETMLTIAADPKHLGARIGITAVLHTWGSAMTHHPHVHMIVPGGGISPDGSRWISS HHHHCCCEEEEECCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCC RPAFLLPVRVLGKLFRRLFLTRLVALHDAGRVSFFGSMAHLTDRRAFLRHLAPVRRKRWV CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VYAKAPFAGPEAVLAYLSRYTHRVAISNSRLIRLDESGVTFRYKDYRRDGADRQQLMTLG EEEECCCCCHHHHHHHHHHHHHEEEECCCEEEEECCCCCEEEEHHHHCCCCCHHHHHHCC PDEFIRRFLLHVLPKGFHRIRHCGLLAGSARKASLALARELLNVAVPSDDDTTNEPDDFR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PPCPCCGGRMIVIEVFERWRQPRGPPHGSPSTGTSTP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]