| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475348
Identifier: 13475348
GI number: 13475348
Start: 5216933
End: 5217364
Strand: Direct
Name: 13475348
Synonym: mlr6394
Alternate gene names: NA
Gene position: 5216933-5217364 (Clockwise)
Preceding gene: 13475345
Following gene: 13475349
Centisome position: 74.15
GC content: 54.86
Gene sequence:
>432_bases GTGCGACATTGCAATCATCCATTTATTGGCTCAACTGCCCACATGGCCGTGAATGAACTGGATTTGTTGGTTTTCCAGAT GGCAGTGGAAAGCGTCCGCTCACTCTGCTTGAGCTTCAATGACAAAGCGGCGGAGATAGCCGCGAGGAGCCGCGGAAACC TGCTTTTCGATGTGCGGATCGATGATGACGCCGAGGTCCAACGGCTCGCAGCCATCCGATATCGAGGTGGGCAGATTGGT GTGGTGACGTTGGACAGACAAGGCCTTATTAGCCGCTACTGCGTCGTCGACGGTACCTTCTCCCGCTTCATTGCACCGTT GGAGAATTGGACCAACATGCCGGTGTCAATGCAGGCCAAAATCGATGTCACTCACCATGCCGGCCTCTTCCTAGGCGCGT TGCGAAATGCCGGTCATATGCTTCGCAACTAG
Upstream 100 bases:
>100_bases CGACAGGAAATACGGGACCCGCCGTCCTTCAAATATTCCATCGCCGGCAGCGGACAGAAAGCCACGAACGATCAGTCGCC GACACCTGTGAACAAGCCGT
Downstream 100 bases:
>100_bases GGCGGAACGCGTCTGTGGATCTTTGCACCCGCCTGGGCGTTTGAGCAGGCGGCTCATCGAGGTTCTGCAGCGCGCGGATG TGCCACGGCCGGGGTGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRIDDDAEVQRLAAIRYRGGQIG VVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAKIDVTHHAGLFLGALRNAGHMLRN
Sequences:
>Translated_143_residues MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRIDDDAEVQRLAAIRYRGGQIG VVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAKIDVTHHAGLFLGALRNAGHMLRN >Mature_143_residues MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRIDDDAEVQRLAAIRYRGGQIG VVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAKIDVTHHAGLFLGALRNAGHMLRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15925; Mature: 15925
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEE DDDAEVQRLAAIRYRGGQIGVVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAK CCCHHHHHHHHHEECCCEEEEEEECCCCCHHHHEEECCCHHHHHHHHHHHCCCCEEEEEE IDVTHHAGLFLGALRNAGHMLRN EEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEE DDDAEVQRLAAIRYRGGQIGVVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAK CCCHHHHHHHHHEECCCEEEEEEECCCCCHHHHEEECCCHHHHHHHHHHHCCCCEEEEEE IDVTHHAGLFLGALRNAGHMLRN EEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA