Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475348

Identifier: 13475348

GI number: 13475348

Start: 5216933

End: 5217364

Strand: Direct

Name: 13475348

Synonym: mlr6394

Alternate gene names: NA

Gene position: 5216933-5217364 (Clockwise)

Preceding gene: 13475345

Following gene: 13475349

Centisome position: 74.15

GC content: 54.86

Gene sequence:

>432_bases
GTGCGACATTGCAATCATCCATTTATTGGCTCAACTGCCCACATGGCCGTGAATGAACTGGATTTGTTGGTTTTCCAGAT
GGCAGTGGAAAGCGTCCGCTCACTCTGCTTGAGCTTCAATGACAAAGCGGCGGAGATAGCCGCGAGGAGCCGCGGAAACC
TGCTTTTCGATGTGCGGATCGATGATGACGCCGAGGTCCAACGGCTCGCAGCCATCCGATATCGAGGTGGGCAGATTGGT
GTGGTGACGTTGGACAGACAAGGCCTTATTAGCCGCTACTGCGTCGTCGACGGTACCTTCTCCCGCTTCATTGCACCGTT
GGAGAATTGGACCAACATGCCGGTGTCAATGCAGGCCAAAATCGATGTCACTCACCATGCCGGCCTCTTCCTAGGCGCGT
TGCGAAATGCCGGTCATATGCTTCGCAACTAG

Upstream 100 bases:

>100_bases
CGACAGGAAATACGGGACCCGCCGTCCTTCAAATATTCCATCGCCGGCAGCGGACAGAAAGCCACGAACGATCAGTCGCC
GACACCTGTGAACAAGCCGT

Downstream 100 bases:

>100_bases
GGCGGAACGCGTCTGTGGATCTTTGCACCCGCCTGGGCGTTTGAGCAGGCGGCTCATCGAGGTTCTGCAGCGCGCGGATG
TGCCACGGCCGGGGTGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRIDDDAEVQRLAAIRYRGGQIG
VVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAKIDVTHHAGLFLGALRNAGHMLRN

Sequences:

>Translated_143_residues
MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRIDDDAEVQRLAAIRYRGGQIG
VVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAKIDVTHHAGLFLGALRNAGHMLRN
>Mature_143_residues
MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRIDDDAEVQRLAAIRYRGGQIG
VVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAKIDVTHHAGLFLGALRNAGHMLRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15925; Mature: 15925

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEE
DDDAEVQRLAAIRYRGGQIGVVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAK
CCCHHHHHHHHHEECCCEEEEEEECCCCCHHHHEEECCCHHHHHHHHHHHCCCCEEEEEE
IDVTHHAGLFLGALRNAGHMLRN
EEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHCNHPFIGSTAHMAVNELDLLVFQMAVESVRSLCLSFNDKAAEIAARSRGNLLFDVRI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEE
DDDAEVQRLAAIRYRGGQIGVVTLDRQGLISRYCVVDGTFSRFIAPLENWTNMPVSMQAK
CCCHHHHHHHHHEECCCEEEEEEECCCCCHHHHEEECCCHHHHHHHHHHHCCCCEEEEEE
IDVTHHAGLFLGALRNAGHMLRN
EEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA