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The map label for this gene is oruR [H]

Identifier: 13475216

GI number: 13475216

Start: 5060670

End: 5061734

Strand: Reverse

Name: oruR [H]

Synonym: mll6243

Alternate gene names: 13475216

Gene position: 5061734-5060670 (Counterclockwise)

Preceding gene: 13475219

Following gene: 13475214

Centisome position: 71.94

GC content: 55.02

Gene sequence:

>1065_bases
GTGAGAGATATGGTCCCTCGTCTTACCAAATCCTATGAGGCAAGCTCCCAGCCGATAGCCAGTATCCGCTCCTCTGTTCT
AAGCGTGGTGGTCGGTGCGCTCGAGGCAACGGGGGTTTCAACCGACCATTTGCTGGCCCAGCATGGGCTGTCCAGACTGA
CTTTGGACGATCCTTATAACCCGGTGTCTCTCAAGAATTATGTGGCGTTCTTCGAGGACGCCGCAAGAATGAGCAGCCAG
CCAATGTTGGGGATACGGTTGGGGAACGCGATCAAGGCCGAGGATTTGGGACCTGTTGGCGTACTCTACACAATGATGCA
GACTCTCCGTTCTGCAATCGTCCGGTTCAGCCATTTCTTTCCAGCATTGCAAGGAAGCACGAAGCTTGGCCTTTCGGTGA
GAGGTGACGCAACTTGGCTTGAATATCAGATTGAGGACCAGACAATCTGGCCAAGGCGTCAGGACACCGAGTTTACCCTA
GCCCTTATCTGCGCGCTCACGCGTAGCCGTTTGGGGCGCGGTTGGGCGCCGGAGGAGATTCATTTTGAGCATTCTGCCCC
GACAAATGGTCGCGACATGGCCCACTTCTTCGGAGCGGTCATTCGATTTGATCAGCCGATAAATCGGATGCTGATCCGAA
CTGAGGATCTTGATCTTCCCTTTGCGTCCGCAAATCCAGCGGCAATTGCCATCATTGAGCAGCACCTGAACGATTTGATT
GGAGATGGCGTCGTTCCAGCCTTTGAGGACGCTGTTCTGCAAGCAATCATGCGTTGCATGAAACGGGGAGAGGTTACGCT
GGAACTCGTTGCGTCGCGGCTTGGAATTGGTCCACGAACGCTCCAAAGACGGCTAGCTGCAACGGGTCGGACATTCCGAG
AGATCGTTCAGCAACAACGTCATGGCACAGCCACGGTGCTCTTGAAAGACGAACGGATTGCCTTGGGTGTTGTTGCGGGA
AATCTTGGCTATGCAGACACGGCCACCATGTCGCGCGCATTCAAGACGTGGACCGGTCAATCTCCGCGCGCATATTCCAA
GAAAAACCGGCGAGAGGCCCGCTGA

Upstream 100 bases:

>100_bases
TTGCGCAATTTTGCAATCTGCGTAGCTACTCACGAAATTTGTAAAACGTGACGATACCGATGCAAAATGGGGCAATTTAC
GGGTTTCACCGAACCGTCAG

Downstream 100 bases:

>100_bases
AGCAAAGCAAGAGGTGTTTGCGTCTCGGTCCGTTGCTGAAGTCTGGTCCCCGCATCTCGAGACGGCCCGCGATCATGGTC
TTATCGCTTGCGCCATGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRDMVPRLTKSYEASSQPIASIRSSVLSVVVGALEATGVSTDHLLAQHGLSRLTLDDPYNPVSLKNYVAFFEDAARMSSQ
PMLGIRLGNAIKAEDLGPVGVLYTMMQTLRSAIVRFSHFFPALQGSTKLGLSVRGDATWLEYQIEDQTIWPRRQDTEFTL
ALICALTRSRLGRGWAPEEIHFEHSAPTNGRDMAHFFGAVIRFDQPINRMLIRTEDLDLPFASANPAAIAIIEQHLNDLI
GDGVVPAFEDAVLQAIMRCMKRGEVTLELVASRLGIGPRTLQRRLAATGRTFREIVQQQRHGTATVLLKDERIALGVVAG
NLGYADTATMSRAFKTWTGQSPRAYSKKNRREAR

Sequences:

>Translated_354_residues
MRDMVPRLTKSYEASSQPIASIRSSVLSVVVGALEATGVSTDHLLAQHGLSRLTLDDPYNPVSLKNYVAFFEDAARMSSQ
PMLGIRLGNAIKAEDLGPVGVLYTMMQTLRSAIVRFSHFFPALQGSTKLGLSVRGDATWLEYQIEDQTIWPRRQDTEFTL
ALICALTRSRLGRGWAPEEIHFEHSAPTNGRDMAHFFGAVIRFDQPINRMLIRTEDLDLPFASANPAAIAIIEQHLNDLI
GDGVVPAFEDAVLQAIMRCMKRGEVTLELVASRLGIGPRTLQRRLAATGRTFREIVQQQRHGTATVLLKDERIALGVVAG
NLGYADTATMSRAFKTWTGQSPRAYSKKNRREAR
>Mature_354_residues
MRDMVPRLTKSYEASSQPIASIRSSVLSVVVGALEATGVSTDHLLAQHGLSRLTLDDPYNPVSLKNYVAFFEDAARMSSQ
PMLGIRLGNAIKAEDLGPVGVLYTMMQTLRSAIVRFSHFFPALQGSTKLGLSVRGDATWLEYQIEDQTIWPRRQDTEFTL
ALICALTRSRLGRGWAPEEIHFEHSAPTNGRDMAHFFGAVIRFDQPINRMLIRTEDLDLPFASANPAAIAIIEQHLNDLI
GDGVVPAFEDAVLQAIMRCMKRGEVTLELVASRLGIGPRTLQRRLAATGRTFREIVQQQRHGTATVLLKDERIALGVVAG
NLGYADTATMSRAFKTWTGQSPRAYSKKNRREAR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39235; Mature: 39235

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDMVPRLTKSYEASSQPIASIRSSVLSVVVGALEATGVSTDHLLAQHGLSRLTLDDPYN
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCC
PVSLKNYVAFFEDAARMSSQPMLGIRLGNAIKAEDLGPVGVLYTMMQTLRSAIVRFSHFF
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PALQGSTKLGLSVRGDATWLEYQIEDQTIWPRRQDTEFTLALICALTRSRLGRGWAPEEI
HHHCCCCEECEEECCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE
HFEHSAPTNGRDMAHFFGAVIRFDQPINRMLIRTEDLDLPFASANPAAIAIIEQHLNDLI
EECCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
GDGVVPAFEDAVLQAIMRCMKRGEVTLELVASRLGIGPRTLQRRLAATGRTFREIVQQQR
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC
HGTATVLLKDERIALGVVAGNLGYADTATMSRAFKTWTGQSPRAYSKKNRREAR
CCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MRDMVPRLTKSYEASSQPIASIRSSVLSVVVGALEATGVSTDHLLAQHGLSRLTLDDPYN
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCC
PVSLKNYVAFFEDAARMSSQPMLGIRLGNAIKAEDLGPVGVLYTMMQTLRSAIVRFSHFF
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PALQGSTKLGLSVRGDATWLEYQIEDQTIWPRRQDTEFTLALICALTRSRLGRGWAPEEI
HHHCCCCEECEEECCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE
HFEHSAPTNGRDMAHFFGAVIRFDQPINRMLIRTEDLDLPFASANPAAIAIIEQHLNDLI
EECCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
GDGVVPAFEDAVLQAIMRCMKRGEVTLELVASRLGIGPRTLQRRLAATGRTFREIVQQQR
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC
HGTATVLLKDERIALGVVAGNLGYADTATMSRAFKTWTGQSPRAYSKKNRREAR
CCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]