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The map label for this gene is glxA [H]

Identifier: 13475215

GI number: 13475215

Start: 5059201

End: 5060190

Strand: Direct

Name: glxA [H]

Synonym: mlr6241

Alternate gene names: 13475215

Gene position: 5059201-5060190 (Clockwise)

Preceding gene: 13475202

Following gene: 13475217

Centisome position: 71.9

GC content: 60.91

Gene sequence:

>990_bases
ATGACGCCTGAATTGGACAGACAAACTCAGCAGTTCGGTTTTCTGCTGCTACCGAATTTCGCCCTCATGTCCTACGCATC
GGCGACCGAACCCTTACGCGCCGCCAACCTCCTCGCGGGCCGCAGCCTCTATGTCATCAGGCAGCTTTCGCAAGGTGGCC
GTCCCGTGCAGAGCTCCGGCGGTATCGACATCGCCTGCGATGATATTTCGTCAGTGGGTGCGGAATTCCATACAGTGTTC
GTCTGCGCGGGCGGCGATCCCGGCAACTGGGCGGAAGCGGACAGGCTGTTCAAAACGTTGCGGCGGTTGTCGCGCCTCGG
CGTCCGTCTTGGCGCAATCTCGAGCGGCGCCTATCTCTTGGCTGCCGCCGGTCTGCTCGACAACAGAGATTTCACCATTC
ACTGGGAGCATGCCCCGATCCTGCGTGAGGCCTATCCGGCTTTAGCGCTCCGGCAAGCCCGTTATGTGATCGACGGCGAT
CGCATAACCTGCGGCGGAGGCGTGGCTCCGCTCGACATGATGCATGCGCTGATCGCCGAACGCATGGGAGCGCATTTCGC
GAACCGCGTCAGCGACTGGTACCTTCACACAGCGATTGCCGACCCCTCAGACCCGCAACGCGGTTCTGCGGCCGAGCGAT
TTGGCACCCACAATCCGATCCTGCTGGCCGCGCTTGAGAAGATGGAAGCGACGATTGAAAATCCGCTCGATCGCGAAGCA
ATGGCGCATTTCCTCTCGATCAGCGCCCGTCATCTGGATCGCCTATTTACCCAGCATCTGAACGCCGGCTTCCTGCAAAG
CTACCGCCGGATTCGGCTTGATCACGCGCGGCGGCTGATCGAACAGAGCCCGCTTGCGATCGCTGAAATTGCCTTCGCCA
CCGGCTTCTCCAGCACCGGACACTTTTCCCAAGCGTTCAAGGCCCAATACGGCAGGCCCCCTAGCTCTTTGCGATCCAAT
CGTCCCAAGGGGACAGGTCCCTTTGCGTGA

Upstream 100 bases:

>100_bases
TCGCATAGCTGGCCATATCCAAGCTGGGACTTGGGTCAACCTATGCCCGTCGACCAGATTTCAGTTCCACCTATGGGACG
GTTTATTATATAGATCGGAC

Downstream 100 bases:

>100_bases
TAGAACGCTCACATCTATCGGGGAATTGCCGAAACACGCAGTCAAAAAGCTGCAGCGCGCGGGGTTCGGCCGCCGTTCCG
AGCAGCCGGGTCCTGTTCAA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTPELDRQTQQFGFLLLPNFALMSYASATEPLRAANLLAGRSLYVIRQLSQGGRPVQSSGGIDIACDDISSVGAEFHTVF
VCAGGDPGNWAEADRLFKTLRRLSRLGVRLGAISSGAYLLAAAGLLDNRDFTIHWEHAPILREAYPALALRQARYVIDGD
RITCGGGVAPLDMMHALIAERMGAHFANRVSDWYLHTAIADPSDPQRGSAAERFGTHNPILLAALEKMEATIENPLDREA
MAHFLSISARHLDRLFTQHLNAGFLQSYRRIRLDHARRLIEQSPLAIAEIAFATGFSSTGHFSQAFKAQYGRPPSSLRSN
RPKGTGPFA

Sequences:

>Translated_329_residues
MTPELDRQTQQFGFLLLPNFALMSYASATEPLRAANLLAGRSLYVIRQLSQGGRPVQSSGGIDIACDDISSVGAEFHTVF
VCAGGDPGNWAEADRLFKTLRRLSRLGVRLGAISSGAYLLAAAGLLDNRDFTIHWEHAPILREAYPALALRQARYVIDGD
RITCGGGVAPLDMMHALIAERMGAHFANRVSDWYLHTAIADPSDPQRGSAAERFGTHNPILLAALEKMEATIENPLDREA
MAHFLSISARHLDRLFTQHLNAGFLQSYRRIRLDHARRLIEQSPLAIAEIAFATGFSSTGHFSQAFKAQYGRPPSSLRSN
RPKGTGPFA
>Mature_328_residues
TPELDRQTQQFGFLLLPNFALMSYASATEPLRAANLLAGRSLYVIRQLSQGGRPVQSSGGIDIACDDISSVGAEFHTVFV
CAGGDPGNWAEADRLFKTLRRLSRLGVRLGAISSGAYLLAAAGLLDNRDFTIHWEHAPILREAYPALALRQARYVIDGDR
ITCGGGVAPLDMMHALIAERMGAHFANRVSDWYLHTAIADPSDPQRGSAAERFGTHNPILLAALEKMEATIENPLDREAM
AHFLSISARHLDRLFTQHLNAGFLQSYRRIRLDHARRLIEQSPLAIAEIAFATGFSSTGHFSQAFKAQYGRPPSSLRSNR
PKGTGPFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788725, Length=81, Percent_Identity=35.8024691358025, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36037; Mature: 35906

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELDRQTQQFGFLLLPNFALMSYASATEPLRAANLLAGRSLYVIRQLSQGGRPVQSSG
CCCCCCCHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
GIDIACDDISSVGAEFHTVFVCAGGDPGNWAEADRLFKTLRRLSRLGVRLGAISSGAYLL
CCEEEECCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AAAGLLDNRDFTIHWEHAPILREAYPALALRQARYVIDGDRITCGGGVAPLDMMHALIAE
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHHH
RMGAHFANRVSDWYLHTAIADPSDPQRGSAAERFGTHNPILLAALEKMEATIENPLDREA
HHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH
MAHFLSISARHLDRLFTQHLNAGFLQSYRRIRLDHARRLIEQSPLAIAEIAFATGFSSTG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
HFSQAFKAQYGRPPSSLRSNRPKGTGPFA
HHHHHHHHHCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TPELDRQTQQFGFLLLPNFALMSYASATEPLRAANLLAGRSLYVIRQLSQGGRPVQSSG
CCCCCCHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
GIDIACDDISSVGAEFHTVFVCAGGDPGNWAEADRLFKTLRRLSRLGVRLGAISSGAYLL
CCEEEECCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AAAGLLDNRDFTIHWEHAPILREAYPALALRQARYVIDGDRITCGGGVAPLDMMHALIAE
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHHH
RMGAHFANRVSDWYLHTAIADPSDPQRGSAAERFGTHNPILLAALEKMEATIENPLDREA
HHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH
MAHFLSISARHLDRLFTQHLNAGFLQSYRRIRLDHARRLIEQSPLAIAEIAFATGFSSTG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
HFSQAFKAQYGRPPSSLRSNRPKGTGPFA
HHHHHHHHHCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]