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The map label for this gene is 13475190

Identifier: 13475190

GI number: 13475190

Start: 5032482

End: 5032823

Strand: Reverse

Name: 13475190

Synonym: mll6212

Alternate gene names: NA

Gene position: 5032823-5032482 (Counterclockwise)

Preceding gene: 13475191

Following gene: 13475189

Centisome position: 71.53

GC content: 59.06

Gene sequence:

>342_bases
GTGGACAATAGCGGCGAGTTCGTCAACAGCAGGCTGATCGAATATTGCATTGGTCACGGCATCGAACTCGCCCGCGCGCG
GCCTTACCGTAAGAACGACCAAGCGTGGATAGAGCAGAAATATGGGGCGGCTGTTCGGAAGCTCTTGGGCGGCAGCCAGG
GCGATCACACGCCTCTACGGAGCATCCAGGCTGTTCGTGAACTTCTTCCAGCCTTCGTTCAAACTGGCTGCCAAAAGCAA
CGCGACGGTGCGAAGGTGGCTAAGCGCTATCATCCACCGCAGGCTCCCGGCGAGCGCTCCCGTAGGCGGAGGGTATCTCG
ATGGCCGTATTCAAAGGCCTAA

Upstream 100 bases:

>100_bases
CGCGAGCCAGATGGACAGAGGCCGCGCCCATCGTGGTGCTTACTCGAGACACTCGACCGGATACGCGCGGCATTGCCCTT
TGCCCTGAAAGCACTGGGAT

Downstream 100 bases:

>100_bases
CAGAAGACCGCACTCGATCACACGTTCAGAAAGTCAGAAACTCCTTGCGCAACGGACGGCAACCACAGAAGGCAACACGA
CGGGATGATGCCCATCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDNSGEFVNSRLIEYCIGHGIELARARPYRKNDQAWIEQKYGAAVRKLLGGSQGDHTPLRSIQAVRELLPAFVQTGCQKQ
RDGAKVAKRYHPPQAPGERSRRRRVSRWPYSKA

Sequences:

>Translated_113_residues
MDNSGEFVNSRLIEYCIGHGIELARARPYRKNDQAWIEQKYGAAVRKLLGGSQGDHTPLRSIQAVRELLPAFVQTGCQKQ
RDGAKVAKRYHPPQAPGERSRRRRVSRWPYSKA
>Mature_113_residues
MDNSGEFVNSRLIEYCIGHGIELARARPYRKNDQAWIEQKYGAAVRKLLGGSQGDHTPLRSIQAVRELLPAFVQTGCQKQ
RDGAKVAKRYHPPQAPGERSRRRRVSRWPYSKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12889; Mature: 12889

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSGEFVNSRLIEYCIGHGIELARARPYRKNDQAWIEQKYGAAVRKLLGGSQGDHTPLR
CCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SIQAVRELLPAFVQTGCQKQRDGAKVAKRYHPPQAPGERSRRRRVSRWPYSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNSGEFVNSRLIEYCIGHGIELARARPYRKNDQAWIEQKYGAAVRKLLGGSQGDHTPLR
CCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SIQAVRELLPAFVQTGCQKQRDGAKVAKRYHPPQAPGERSRRRRVSRWPYSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]