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The map label for this gene is 13475172

Identifier: 13475172

GI number: 13475172

Start: 5009628

End: 5010773

Strand: Direct

Name: 13475172

Synonym: mlr6190

Alternate gene names: NA

Gene position: 5009628-5010773 (Clockwise)

Preceding gene: 13475171

Following gene: 13475173

Centisome position: 71.2

GC content: 66.32

Gene sequence:

>1146_bases
ATGGCCGGCGGTTCGGCGGCACATTCTGCGCCTGTGAAACGACGCAGGAGGCGAACGATGGAATTCTTTTGTGGACTGGA
CGTGGCGATGGACGAGACGGCGGTTTGCGTCGTCGACGATCAGGGCGCGGTGCATCTGGAGGCAGCGGTGATGACCGATC
CCGAGGCGCTGTTTGCGGTGCTGAAGCCGTTTCTCGCGCGACTGCGGCGCGTCGGCCACGAGGCCGGCTCGCTGTCGCCG
TGGCTGCATCCGGAACTCAAGAAACTTGGCCTGCCGGCAATCTGCCTGGAGACGCAGCACGTGCGCGCCGCGCTGTCGGC
GCAGCGCAACAAGACCGACAAGGCCGATGCGCTCGGCATCGCCCACATCATGCGCACCGGCTGGTTCCGCCAAGCCTGCA
TCAAGTCGGAGAGCTGCTACCGGACGAAGCTTCTGCTGACCCACCGGCGCAATCTGAAGGCCAAGTTTCTCGACCTGGAG
AACGCCATCCGGCACTCGCTGAAGTCATTCGGCATCCGCCTTGGCAAGGTCGGACGCGGCGCTTTCGAGCAGGCGGTTCG
CCAGGCTGTGGCCGACGATCCGCTGTCGGCCGAACTGATGGACGCCATGCTGTCGGCGCGCGCGGCGCTGTGGAAACAGT
ATTGCCGACTGCACGATCTCGTCGTCAAAATGGTGGCGCGCAGCGAGCTGTGCCGGCGCTTCATGGCGATCCCCGGCGTC
GGCCCGGTGACGGCGCTCTCGTTCATGACGGCGATCGACGATCCCACACGCTTCCGCCGCTCACGCGACGTCGCGGCCTA
CTTCGGGCTGACCTCGCGGCGCTGGCAGTCGGGCTCCTCGATCGACGTTCAGGGCCGCATCTCGAAGGCTGGCGATGCGG
ACGTGCGGCGCGCGCTCTACGAGGCGGCGTCGGGACTGATGACGCGCTTCAAAGGCAGGGACAAGGTCAAGAGCTGGGGC
CGGGAGATCGCCAAACGCTCCTGCCACCGCAAGGCCTGTGTCGCTGTGGCGCGCAAGCTGGCGGTGATCATGCACGCGAT
GTGGAGCGACGGCACGTTCTATGTCGGCGACGCGGCCATGAGTGACACCGACGCCGCGCAACGCGCCCACATCAAGGATC
GACGCCTGCTCGGAGCGCATCGATGA

Upstream 100 bases:

>100_bases
CCAGGGACGCTTAAGGCGAGGGGCGCGTAATGCCGCCCGTAATCGGGGCGGGCGCCTGAAAGGGCAGCAAAGCTGTGTGT
CAGCCGCGGCGCCGCTGGCG

Downstream 100 bases:

>100_bases
GCGGCGCGACGGCGGTTGAAACGCATGGCGCCCGCACGCTGACGGACGCCATCTGACACAAGGAGATCCGCCCCGGCGGA
TGAGGACCGATGCAGACCAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAGGSAAHSAPVKRRRRRTMEFFCGLDVAMDETAVCVVDDQGAVHLEAAVMTDPEALFAVLKPFLARLRRVGHEAGSLSP
WLHPELKKLGLPAICLETQHVRAALSAQRNKTDKADALGIAHIMRTGWFRQACIKSESCYRTKLLLTHRRNLKAKFLDLE
NAIRHSLKSFGIRLGKVGRGAFEQAVRQAVADDPLSAELMDAMLSARAALWKQYCRLHDLVVKMVARSELCRRFMAIPGV
GPVTALSFMTAIDDPTRFRRSRDVAAYFGLTSRRWQSGSSIDVQGRISKAGDADVRRALYEAASGLMTRFKGRDKVKSWG
REIAKRSCHRKACVAVARKLAVIMHAMWSDGTFYVGDAAMSDTDAAQRAHIKDRRLLGAHR

Sequences:

>Translated_381_residues
MAGGSAAHSAPVKRRRRRTMEFFCGLDVAMDETAVCVVDDQGAVHLEAAVMTDPEALFAVLKPFLARLRRVGHEAGSLSP
WLHPELKKLGLPAICLETQHVRAALSAQRNKTDKADALGIAHIMRTGWFRQACIKSESCYRTKLLLTHRRNLKAKFLDLE
NAIRHSLKSFGIRLGKVGRGAFEQAVRQAVADDPLSAELMDAMLSARAALWKQYCRLHDLVVKMVARSELCRRFMAIPGV
GPVTALSFMTAIDDPTRFRRSRDVAAYFGLTSRRWQSGSSIDVQGRISKAGDADVRRALYEAASGLMTRFKGRDKVKSWG
REIAKRSCHRKACVAVARKLAVIMHAMWSDGTFYVGDAAMSDTDAAQRAHIKDRRLLGAHR
>Mature_380_residues
AGGSAAHSAPVKRRRRRTMEFFCGLDVAMDETAVCVVDDQGAVHLEAAVMTDPEALFAVLKPFLARLRRVGHEAGSLSPW
LHPELKKLGLPAICLETQHVRAALSAQRNKTDKADALGIAHIMRTGWFRQACIKSESCYRTKLLLTHRRNLKAKFLDLEN
AIRHSLKSFGIRLGKVGRGAFEQAVRQAVADDPLSAELMDAMLSARAALWKQYCRLHDLVVKMVARSELCRRFMAIPGVG
PVTALSFMTAIDDPTRFRRSRDVAAYFGLTSRRWQSGSSIDVQGRISKAGDADVRRALYEAASGLMTRFKGRDKVKSWGR
EIAKRSCHRKACVAVARKLAVIMHAMWSDGTFYVGDAAMSDTDAAQRAHIKDRRLLGAHR

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42325; Mature: 42194

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGSAAHSAPVKRRRRRTMEFFCGLDVAMDETAVCVVDDQGAVHLEAAVMTDPEALFAV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEHHCCHHHHHHH
LKPFLARLRRVGHEAGSLSPWLHPELKKLGLPAICLETQHVRAALSAQRNKTDKADALGI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHH
AHIMRTGWFRQACIKSESCYRTKLLLTHRRNLKAKFLDLENAIRHSLKSFGIRLGKVGRG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCH
AFEQAVRQAVADDPLSAELMDAMLSARAALWKQYCRLHDLVVKMVARSELCRRFMAIPGV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GPVTALSFMTAIDDPTRFRRSRDVAAYFGLTSRRWQSGSSIDVQGRISKAGDADVRRALY
CHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHH
EAASGLMTRFKGRDKVKSWGREIAKRSCHRKACVAVARKLAVIMHAMWSDGTFYVGDAAM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
SDTDAAQRAHIKDRRLLGAHR
CCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGGSAAHSAPVKRRRRRTMEFFCGLDVAMDETAVCVVDDQGAVHLEAAVMTDPEALFAV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEHHCCHHHHHHH
LKPFLARLRRVGHEAGSLSPWLHPELKKLGLPAICLETQHVRAALSAQRNKTDKADALGI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHH
AHIMRTGWFRQACIKSESCYRTKLLLTHRRNLKAKFLDLENAIRHSLKSFGIRLGKVGRG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCH
AFEQAVRQAVADDPLSAELMDAMLSARAALWKQYCRLHDLVVKMVARSELCRRFMAIPGV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GPVTALSFMTAIDDPTRFRRSRDVAAYFGLTSRRWQSGSSIDVQGRISKAGDADVRRALY
CHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHH
EAASGLMTRFKGRDKVKSWGREIAKRSCHRKACVAVARKLAVIMHAMWSDGTFYVGDAAM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
SDTDAAQRAHIKDRRLLGAHR
CCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]