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The map label for this gene is gabD [C]

Identifier: 13475141

GI number: 13475141

Start: 4977408

End: 4977521

Strand: Reverse

Name: gabD [C]

Synonym: msl6152

Alternate gene names: 13475141

Gene position: 4977521-4977408 (Counterclockwise)

Preceding gene: 13475142

Following gene: 13475140

Centisome position: 70.74

GC content: 62.28

Gene sequence:

>114_bases
ATGCTGGTGATCAAGCAGCCAGCCGGCGTTGTTGGCACGATCACGCTATGGAATTTCCCGGCTTCAATGGTGGCGCGCAA
GATCTCACCGGCGCTGGCGGCGGCTGCACCGTGA

Upstream 100 bases:

>100_bases
AGTCGGAGGTCTCGCATGCGGCGGCATATCTGCAATGGTATGCCAAAGAGGCCAACCGCATCTATGGCGAGACGATCTCC
CCGCCCTCGACCGACCGGGA

Downstream 100 bases:

>100_bases
TATTGAAACCTGCCGAACAGACGCCGCTTGTTGCAGGCGCAATGTGCGCGGCCGGCTTTCCCGAAGGCGTCGTCAACCTG
ATCCATGCTTGCAAAGGCGA

Product: hypothetical protein

Products: H+; Nicotinamide adenine dinucleotide phosphate - reduced; Succinate [C]

Alternate protein names: NA

Number of amino acids: Translated: 37; Mature: 37

Protein sequence:

>37_residues
MLVIKQPAGVVGTITLWNFPASMVARKISPALAAAAP

Sequences:

>Translated_37_residues
MLVIKQPAGVVGTITLWNFPASMVARKISPALAAAAP
>Mature_37_residues
MLVIKQPAGVVGTITLWNFPASMVARKISPALAAAAP

Specific function: 4-aminobutyrate (GABA) degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.16 [C]

Molecular weight: Translated: 3792; Mature: 3792

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIKQPAGVVGTITLWNFPASMVARKISPALAAAAP
CEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLVIKQPAGVVGTITLWNFPASMVARKISPALAAAAP
CEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; Nicotinamide adenine dinucleotide phosphate; Succinic semialdehyde [C]

Specific reaction: H2O + Nicotinamide adenine dinucleotide phosphate + Succinic semialdehyde --> (2) H+ + Nicotinamide adenine dinucleotide phosphate - reduced + Succinate [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA