| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475126
Identifier: 13475126
GI number: 13475126
Start: 4967605
End: 4967811
Strand: Reverse
Name: 13475126
Synonym: msl6138
Alternate gene names: NA
Gene position: 4967811-4967605 (Counterclockwise)
Preceding gene: 13475130
Following gene: 13475125
Centisome position: 70.6
GC content: 51.69
Gene sequence:
>207_bases ATGAAGCGCACGATGACGCTTAACTTGTCGGACGCGGAAATGAGCGTCCTTGAAACCATGTGTGAAGAAAAAGGACTGTC CAAAACCGCGCTCGTTCGCCAGGCGCTGCGGCTGTACAAATCAGTCGACGATCGACTGGCGCGTGGCGAAAAGGTGTTTG TCGAAAGCGCGGATAAGTCAGAAAAAGTAGAGCTGATGGTTCTATGA
Upstream 100 bases:
>100_bases TAGCCAATGTCTAGCTAGTTAATAGCTATTTTATCCTCATTTTTTGATTGACAATTGTGGACTTTATAGCTACATAAAAA ACACTGGTTAGGAGGCGCCT
Downstream 100 bases:
>100_bases AAGAGCTGATCGATCGCGTCTTTCTCTTAAATCGCGCAACAGGCCGGTTCGAAGATGCAGATCTGTATCATGGCCTGGAC AGCACGAATCTGGCGCATAT
Product: transcriptional regulator
Products: NA
Alternate protein names: Ribbon-Helix-Helix Protein CopG Family
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MKRTMTLNLSDAEMSVLETMCEEKGLSKTALVRQALRLYKSVDDRLARGEKVFVESADKSEKVELMVL
Sequences:
>Translated_68_residues MKRTMTLNLSDAEMSVLETMCEEKGLSKTALVRQALRLYKSVDDRLARGEKVFVESADKSEKVELMVL >Mature_68_residues MKRTMTLNLSDAEMSVLETMCEEKGLSKTALVRQALRLYKSVDDRLARGEKVFVESADKSEKVELMVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7723; Mature: 7723
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTMTLNLSDAEMSVLETMCEEKGLSKTALVRQALRLYKSVDDRLARGEKVFVESADKS CCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC EKVELMVL CCEEEEEC >Mature Secondary Structure MKRTMTLNLSDAEMSVLETMCEEKGLSKTALVRQALRLYKSVDDRLARGEKVFVESADKS CCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC EKVELMVL CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA