| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475118
Identifier: 13475118
GI number: 13475118
Start: 4960125
End: 4960442
Strand: Reverse
Name: 13475118
Synonym: mll6128
Alternate gene names: NA
Gene position: 4960442-4960125 (Counterclockwise)
Preceding gene: 13475123
Following gene: 13475117
Centisome position: 70.5
GC content: 63.84
Gene sequence:
>318_bases ATGGTCGCGGATAAACCGTTCCTGCCGGGCGCGCCCAAGACCGGGCGGCGCGTGGTGACGGACCTGCGCGAGGTCTTGAA CGCGATCCGCTACATGGCCCGATCAGATGGCGGCTGGCGCATGCTGCCAAAGGATTTCCCGCCCATATCGGTCGCGGTCG AGACGCCTTACGGACATGCCCACGAACTGCGCCAACTGGCTGGAACGTTCCCCGGCCTGACGGCGAAGCAGCAGGCGCCG ATCAAAGCGCTGAACGCAGAATACGCCAAAACTCGAAGCCGAGTACGAGCATGCCAACGAACTGCCGGCCGATGTTGA
Upstream 100 bases:
>100_bases GTGTTTCAAGCTTGGGATGTGGACCCGAGCGACGCGTGGCCGTGTGGCCGATATCAAGAAGAAGACCAAGCGCTATCCCC TCCGATCTGACGCATGAGGA
Downstream 100 bases:
>100_bases CGAACGGCTACCAGGGGCGGCTACGGCTGCACTCATTGTCGGATCTTCGACGAAGTCGGACATGAGACACAGCGCTATCG GAGTGACCGCATTGTTCTGC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MVADKPFLPGAPKTGRRVVTDLREVLNAIRYMARSDGGWRMLPKDFPPISVAVETPYGHAHELRQLAGTFPGLTAKQQAP IKALNAEYAKTRSRVRACQRTAGRC
Sequences:
>Translated_105_residues MVADKPFLPGAPKTGRRVVTDLREVLNAIRYMARSDGGWRMLPKDFPPISVAVETPYGHAHELRQLAGTFPGLTAKQQAP IKALNAEYAKTRSRVRACQRTAGRC >Mature_105_residues MVADKPFLPGAPKTGRRVVTDLREVLNAIRYMARSDGGWRMLPKDFPPISVAVETPYGHAHELRQLAGTFPGLTAKQQAP IKALNAEYAKTRSRVRACQRTAGRC
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11604; Mature: 11604
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADKPFLPGAPKTGRRVVTDLREVLNAIRYMARSDGGWRMLPKDFPPISVAVETPYGHA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCH HELRQLAGTFPGLTAKQQAPIKALNAEYAKTRSRVRACQRTAGRC HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVADKPFLPGAPKTGRRVVTDLREVLNAIRYMARSDGGWRMLPKDFPPISVAVETPYGHA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCCCCH HELRQLAGTFPGLTAKQQAPIKALNAEYAKTRSRVRACQRTAGRC HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA