| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475113
Identifier: 13475113
GI number: 13475113
Start: 4953519
End: 4953704
Strand: Reverse
Name: 13475113
Synonym: msl6121
Alternate gene names: NA
Gene position: 4953704-4953519 (Counterclockwise)
Preceding gene: 13475114
Following gene: 13475112
Centisome position: 70.4
GC content: 59.68
Gene sequence:
>186_bases ATGCGGCAAACAGCCCGGGTCGCATTTCTTTACTCAGCCGAACGGGACCGCTGCATCTGCGCCACTGAGCCTGGCCATTG GCGAGCAAGCCATCGCCATGAGGCGCGTCTGGCCATGGTCAGCTTGCGTGCGATCTGCGGTTTTGCAGTTGGTGGTGAGG AACTGCTTCTCATTCGCGTGGTCTAA
Upstream 100 bases:
>100_bases TCGAACACGATACGCTCCGAGCTGCGGCGGCTAAGCTGAACAACGACTGGCCTCTCAAATCTGATCAAGCCGGTCATCTC TCCCCTTCTCCACAGCCACT
Downstream 100 bases:
>100_bases CCGTGAAACCTGTGCATACTGCACTATTCGACGCGGCTCGCGCCAGTCTCAAACTCGTCGTCGAAATCTACACCTGCACT TTTCCACTGCCCGATCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MRQTARVAFLYSAERDRCICATEPGHWRASHRHEARLAMVSLRAICGFAVGGEELLLIRVV
Sequences:
>Translated_61_residues MRQTARVAFLYSAERDRCICATEPGHWRASHRHEARLAMVSLRAICGFAVGGEELLLIRVV >Mature_61_residues MRQTARVAFLYSAERDRCICATEPGHWRASHRHEARLAMVSLRAICGFAVGGEELLLIRVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6882; Mature: 6882
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQTARVAFLYSAERDRCICATEPGHWRASHRHEARLAMVSLRAICGFAVGGEELLLIRV CCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE V C >Mature Secondary Structure MRQTARVAFLYSAERDRCICATEPGHWRASHRHEARLAMVSLRAICGFAVGGEELLLIRV CCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA