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The map label for this gene is yliC [C]

Identifier: 13475077

GI number: 13475077

Start: 4920382

End: 4921371

Strand: Direct

Name: yliC [C]

Synonym: mlr6083

Alternate gene names: 13475077

Gene position: 4920382-4921371 (Clockwise)

Preceding gene: 13475076

Following gene: 13475078

Centisome position: 69.93

GC content: 56.06

Gene sequence:

>990_bases
GTGAACGGAGGCGGGACGAGCCGGCATATTGGACGCATCATCATAAGGGCGATTGTGACGCTTCTGATGGTGGCGATACT
TAACTTCATCCTGTTCCGAGTCATTCCAGGTGATCCTGCCAAGCTTCTGCTTGGCGGTGCGCGTACCAGCGTGACCGCTG
AGCAGATCGAGGCGCAGCGCCAGAACTGGGGCCTCGATCGGCCGCTGTTTCCGGACCAGTTGGTCGACTACCTGTCGGCA
ACTGTCCGGGGCGATTTGGGCTACAGCTTCAAATTCAGGGGCAGGCATGTCGCCGACCTGATTTTGGAGCACTTGCCAGC
CACTATCATCTTGGTCGGGATTGCTCAGTTAACAGCAATTGTTATTGGGGTGATGCTTGGCATCTATGCGGGCTGGCGCC
GAGGAGGAACACTAGACAATCTTGCCACCGGAACCTCTCTGCTGCTCTACTCGACGCCTTCTTTCTGGGTGGCTATGATC
CTGGTAGTGATCTTCAGTACATCTTTGGGCTGGCTTCCGGGCTACGGTGCATATTCACCCGGAGGAACCATCAGTTTTGT
TGACTCGTTACTTGATCACCTCAGGCATCTCGCGCTTCCGGTCACCGCGGTGGCTCTCGGACTCATTGGCCAATACGTCG
TGGTCGCACGTGCCGCAATGAGCGACGTTGTTACTGAGGATTACATGGTGACTGCGCGGGCTAAAGGGCTGACCAATGGT
CAGATGCTCATGCGTCATGCATTTCGCAATGCAATGCTACCGGTCGTAACCCTGATTGCCCTTAATCTTGGCTACGTGGT
CGCCGGTGCTATCACCGTCGAAGCCGTATTCGCCTGGCCGGGCATCGGAGGACTGACTGTGGAAGCGCTGAATGCACGGG
ACTACCCTATCCTTCAAGGCATTTTCCTGTTGCTTGGTGCGTCGATCGTTGTTGCAAACCTCGTAGCTGATCTCGCCTAT
GGCCTTCTTGATCCGCGAGTCCGCCAATGA

Upstream 100 bases:

>100_bases
AAGCCCATCGAAAGGACTGCTTCCAAGGTTGGGGGACGAACGACGCGGTGTCGATGTGGGGCTATTTCCCGTTTGATCGC
CTGAAGCCGGCGCCAACGCC

Downstream 100 bases:

>100_bases
GCGAAAGTACAGTTCGACCTTCCCCGCGAGGCCGGGCGCGAGCGATAAAAGACTTTCTGCGTCAATTTCTTGGCCACGGC
GGGGCTCAGGCGGGCGTCGT

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNGGGTSRHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQRQNWGLDRPLFPDQLVDYLSA
TVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAIVIGVMLGIYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMI
LVVIFSTSLGWLPGYGAYSPGGTISFVDSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMVTARAKGLTNG
QMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEALNARDYPILQGIFLLLGASIVVANLVADLAY
GLLDPRVRQ

Sequences:

>Translated_329_residues
MNGGGTSRHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQRQNWGLDRPLFPDQLVDYLSA
TVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAIVIGVMLGIYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMI
LVVIFSTSLGWLPGYGAYSPGGTISFVDSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMVTARAKGLTNG
QMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEALNARDYPILQGIFLLLGASIVVANLVADLAY
GLLDPRVRQ
>Mature_329_residues
MNGGGTSRHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQRQNWGLDRPLFPDQLVDYLSA
TVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAIVIGVMLGIYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMI
LVVIFSTSLGWLPGYGAYSPGGTISFVDSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMVTARAKGLTNG
QMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEALNARDYPILQGIFLLLGASIVVANLVADLAY
GLLDPRVRQ

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=311, Percent_Identity=37.2990353697749, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1789965, Length=331, Percent_Identity=36.5558912386707, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1789888, Length=324, Percent_Identity=33.9506172839506, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=30.5295950155763, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI1787761, Length=319, Percent_Identity=36.6771159874608, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1788504, Length=281, Percent_Identity=31.3167259786477, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787550, Length=271, Percent_Identity=26.9372693726937, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35259; Mature: 35259

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGGTSRHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHH
QNWGLDRPLFPDQLVDYLSATVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAI
HHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHH
VIGVMLGIYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMILVVIFSTSLGWLPGYGAYSP
HHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGTISFVDSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMVTARAKGLTNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCHH
QMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEALNARDYPILQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHH
IFLLLGASIVVANLVADLAYGLLDPRVRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNGGGTSRHIGRIIIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHH
QNWGLDRPLFPDQLVDYLSATVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAI
HHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHH
VIGVMLGIYAGWRRGGTLDNLATGTSLLLYSTPSFWVAMILVVIFSTSLGWLPGYGAYSP
HHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGTISFVDSLLDHLRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMVTARAKGLTNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCHH
QMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEALNARDYPILQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHH
IFLLLGASIVVANLVADLAYGLLDPRVRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA