| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474905
Identifier: 13474905
GI number: 13474905
Start: 4757958
End: 4759265
Strand: Reverse
Name: 13474905
Synonym: mll5889
Alternate gene names: NA
Gene position: 4759265-4757958 (Counterclockwise)
Preceding gene: 13474913
Following gene: 13474891
Centisome position: 67.64
GC content: 58.79
Gene sequence:
>1308_bases ATGACCCACACCAATCCATCCAGGCCTACCGCTCGTTTTCAGACGCCTGCCTCGATAAAGCCGCGCGCTCCTACGAAAGC GATTCTGATCCTCATGGACGGCGTAAGCGCGGACTATTTCGAAAAGCACAAACATCGGTTGCCGACGCTTCTTCGTTTGG CAGGAGACGGTCTGTCCATCACTCGCCTGCGCTCAACGGTGCCGGGAACGTCGATGCCGGGGCGCGCAAGCATGCTAACC GGCGCGGCGCCTCAAGCGAACGGGATCTACGGAAACCACATTGTGCGAGATGGCTCGTTTGTCTGCGCCGACGCGTCTGA TCTGCGGGTTCCGACCATTGCAAAGCTTGCCAAAAATAGCGGGCTTGATGTCGCGTCCATCGGCGCTGGGTTGATCGACC CAGCCGATTGCGATGTCTTCGTGCCGGCCTGGTGGGAACGAGGGTTTCTCCAGGGAAGCCGGTCATTTAAGAGCCTGCCC GAAAACCGCATCGCTCGCTCGCGCATGATCAAAGATCCAAATGGGCGGTTGCGAGCCGCCGGCGTGCTCGATCTCTTCGG CTTCCCGTCCAGTAGCGACACCGTTGCGAGCACTGCTCTCGTTGCGGGCCTGGCCGCGGATCATCTCATGATCGGGGCTG CAGGAGCGCTGGCTTGCTCGGAGAACCCGCCTGATCTCATTTTGACCGAGATCGACATGACGGATTCGATTCAGCATCAG TTCGGATACGAAAGCGAGGCGGCACATTGGTCTATCGCCGCGGCCGACATGATGATTGGCGCTCTCATCGAAGGACTGAG GCGAGTCGGGCGGAAAGACGATTACGCGATCGTAGTCGCAAGTGACCATGGACATAGCGCCGTCCACACAACCATTTATC CGGATGCGATCATCCCTGACTTGCTTTGGGAAAGTGAAGGAGCGACGCTCCATGTCCTGGTTGACGGAGCTCATGACCGC AGAATCGCAGACGGACTGTTGGCGCGCTTCCAAGTGGAGCCGTGGTCGAGCGACCATGTTCCGGTAAATGAACGCGATTG CATAGCGACCTATGTCGCACCTCCTGGACACTCCTTCGAGGAGACCGTTGGAGACACGCAAGAAGCTGGCCCGACGGGCA GACCTCGATACAGGTCCACCCACGGTTTTCGACCCGGCAGCGCGGAGGACGATCGGATATGCCTGTTGAGCATCCCTGGA ATGCAACCTTGCAATATTGCCTGGGGCTCCGCTGAAGAGTTCACGCCAACCATTGCTCAGATCTTGGGATTGTCCGACGC CCCGTTTTCGGCAAGGGGTCTTCTGTAA
Upstream 100 bases:
>100_bases CGACCCACTGGCGCTCGAAGTATCCCGTGATGCGTTCATACCGGCGTCATCCGAAGCCTATAGGGGGCTTTGGTTTCGAT CGGTCTCTTCCAGGTGCAAC
Downstream 100 bases:
>100_bases CATGCCCGCAAGCGACCGCCTGCGGGCTCGCATATTCGTCATGAGAATACCTCTTTGAAGAATATCCCAAGGTTGGCCAA CAGCCAGAACTTCCGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MTHTNPSRPTARFQTPASIKPRAPTKAILILMDGVSADYFEKHKHRLPTLLRLAGDGLSITRLRSTVPGTSMPGRASMLT GAAPQANGIYGNHIVRDGSFVCADASDLRVPTIAKLAKNSGLDVASIGAGLIDPADCDVFVPAWWERGFLQGSRSFKSLP ENRIARSRMIKDPNGRLRAAGVLDLFGFPSSSDTVASTALVAGLAADHLMIGAAGALACSENPPDLILTEIDMTDSIQHQ FGYESEAAHWSIAAADMMIGALIEGLRRVGRKDDYAIVVASDHGHSAVHTTIYPDAIIPDLLWESEGATLHVLVDGAHDR RIADGLLARFQVEPWSSDHVPVNERDCIATYVAPPGHSFEETVGDTQEAGPTGRPRYRSTHGFRPGSAEDDRICLLSIPG MQPCNIAWGSAEEFTPTIAQILGLSDAPFSARGLL
Sequences:
>Translated_435_residues MTHTNPSRPTARFQTPASIKPRAPTKAILILMDGVSADYFEKHKHRLPTLLRLAGDGLSITRLRSTVPGTSMPGRASMLT GAAPQANGIYGNHIVRDGSFVCADASDLRVPTIAKLAKNSGLDVASIGAGLIDPADCDVFVPAWWERGFLQGSRSFKSLP ENRIARSRMIKDPNGRLRAAGVLDLFGFPSSSDTVASTALVAGLAADHLMIGAAGALACSENPPDLILTEIDMTDSIQHQ FGYESEAAHWSIAAADMMIGALIEGLRRVGRKDDYAIVVASDHGHSAVHTTIYPDAIIPDLLWESEGATLHVLVDGAHDR RIADGLLARFQVEPWSSDHVPVNERDCIATYVAPPGHSFEETVGDTQEAGPTGRPRYRSTHGFRPGSAEDDRICLLSIPG MQPCNIAWGSAEEFTPTIAQILGLSDAPFSARGLL >Mature_434_residues THTNPSRPTARFQTPASIKPRAPTKAILILMDGVSADYFEKHKHRLPTLLRLAGDGLSITRLRSTVPGTSMPGRASMLTG AAPQANGIYGNHIVRDGSFVCADASDLRVPTIAKLAKNSGLDVASIGAGLIDPADCDVFVPAWWERGFLQGSRSFKSLPE NRIARSRMIKDPNGRLRAAGVLDLFGFPSSSDTVASTALVAGLAADHLMIGAAGALACSENPPDLILTEIDMTDSIQHQF GYESEAAHWSIAAADMMIGALIEGLRRVGRKDDYAIVVASDHGHSAVHTTIYPDAIIPDLLWESEGATLHVLVDGAHDRR IADGLLARFQVEPWSSDHVPVNERDCIATYVAPPGHSFEETVGDTQEAGPTGRPRYRSTHGFRPGSAEDDRICLLSIPGM QPCNIAWGSAEEFTPTIAQILGLSDAPFSARGLL
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46539; Mature: 46408
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTNPSRPTARFQTPASIKPRAPTKAILILMDGVSADYFEKHKHRLPTLLRLAGDGLSI CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHCCCCCEE TRLRSTVPGTSMPGRASMLTGAAPQANGIYGNHIVRDGSFVCADASDLRVPTIAKLAKNS EHHHHCCCCCCCCCCHHHEECCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHCC GLDVASIGAGLIDPADCDVFVPAWWERGFLQGSRSFKSLPENRIARSRMIKDPNGRLRAA CCCHHHCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCCEEEE GVLDLFGFPSSSDTVASTALVAGLAADHLMIGAAGALACSENPPDLILTEIDMTDSIQHQ EEEEECCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCEEEEECCCCHHHHHH FGYESEAAHWSIAAADMMIGALIEGLRRVGRKDDYAIVVASDHGHSAVHTTIYPDAIIPD CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCHHHHH LLWESEGATLHVLVDGAHDRRIADGLLARFQVEPWSSDHVPVNERDCIATYVAPPGHSFE HHCCCCCCEEEEEEECCCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCCCCHH ETVGDTQEAGPTGRPRYRSTHGFRPGSAEDDRICLLSIPGMQPCNIAWGSAEEFTPTIAQ HHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCHHCCHHHHH ILGLSDAPFSARGLL HHCCCCCCCHHCCCC >Mature Secondary Structure THTNPSRPTARFQTPASIKPRAPTKAILILMDGVSADYFEKHKHRLPTLLRLAGDGLSI CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHCCCCCEE TRLRSTVPGTSMPGRASMLTGAAPQANGIYGNHIVRDGSFVCADASDLRVPTIAKLAKNS EHHHHCCCCCCCCCCHHHEECCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHCC GLDVASIGAGLIDPADCDVFVPAWWERGFLQGSRSFKSLPENRIARSRMIKDPNGRLRAA CCCHHHCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCCEEEE GVLDLFGFPSSSDTVASTALVAGLAADHLMIGAAGALACSENPPDLILTEIDMTDSIQHQ EEEEECCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCEEEEECCCCHHHHHH FGYESEAAHWSIAAADMMIGALIEGLRRVGRKDDYAIVVASDHGHSAVHTTIYPDAIIPD CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCHHHHH LLWESEGATLHVLVDGAHDRRIADGLLARFQVEPWSSDHVPVNERDCIATYVAPPGHSFE HHCCCCCCEEEEEEECCCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCCCCHH ETVGDTQEAGPTGRPRYRSTHGFRPGSAEDDRICLLSIPGMQPCNIAWGSAEEFTPTIAQ HHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCHHCCHHHHH ILGLSDAPFSARGLL HHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA